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The map label for this gene is ygiF [H]

Identifier: 146339820

GI number: 146339820

Start: 3022758

End: 3024488

Strand: Reverse

Name: ygiF [H]

Synonym: BRADO2821

Alternate gene names: 146339820

Gene position: 3024488-3022758 (Counterclockwise)

Preceding gene: 146339821

Following gene: 146339819

Centisome position: 40.56

GC content: 68.34

Gene sequence:

>1731_bases
ATGCCCGATTCGAACGCGACCGCGTCGATCCACGGTACCGATCGTGCGATCGAAGCGCCGGACGCAGGTCACGCTGCGCA
AAGCGATCAAAGCCAGACTGCCGAGACTGAGCAGCTCGACGGCCAATTGAACCCTTCCGAAGGCGCTGCGGACACCGAGG
CCATCGCGCCGACGCTTCCGGATCCTGAGGCTGGCGGCGGCCATGAGATCGAGCTCAAGCTCGTCGTCGATCCCGCACAG
CTCTCCGGCTTCAACGCTTCCCCGATCGTCACCGCGCACGCGCGCAACAAGGGCGCGCGCAAGCATCTCAAATCCGTCTA
CTACGACACGCCGAAACAGGCGCTGTGGAAGAACGGCTTCACCTTGCGGGTCCGCCAGACCGGCGCGCGCTTCGTCCAGA
CCGTGAAGGTCCAACACAGCGACGACCCGCTCAAGCGCGGCGAATGGGAGGCCAGCGTCGCCTCACTGGAGCCGGATCTG
TCGCTCGCAGCGGCGCTGTTGCCCGAGGAGCTGCGCGACATTCTCACGGACAACAAGCTGCAACCAGTGTTCACAGCCGA
CGTGCATCGCCACGCGCGCCTGCTCGATGTGCCCAATGCGGTGATCGAGATCGCGTTCGACAACGGCGTCATCAAGGCCG
GCGAACGCAGCGAGGCGGTGAGCGAGATCGAGCTCGAGCTGAAGAGCGGCAGTCCGGCGGCGATCTACGAGATCGCGCTG
CGGCTGGCCGAGCACGGCGACGTCAGGCCGTCGATCCGCAGCAAATCGGCGCGCGGCTTCGATCTCGCCGCCGGGCGTCC
GCCGGGCGCCGAGAAGCCGCGGCGACAGGACCTCGATCCGGCGGTCTCGCTCGACGAGGCCTTCGCCATCGTTCTGCGCG
GCAGTCTTCATCATTTGTTGCAGGCGCTGCCGGCCACCGAGGACGGCCGCGATCCGGAAGGCGTGCACCAGTTGCGCGTG
GCGCTGCGCCGCCTGCGCGCCGCACTGCACATCATGCGTCCGCTGGGCACATCGGCTGCGCTCGAAGGCCTCGAAGCCGA
TGCGCGCTGGCTCGCGCAGAATCTCTCGGCGGCGCGCGACCTCGATGTGTTCCTGACCCAGACGCTGCCCGAGATCGCCG
ACGCCTGCGCCGTCGTCGCCGGCTTCGACACGTTGCGCTCGCTCGCGGAACGGCAGCGCGAGCTCGCCTATCGCAAGCTG
CGCATCGCGCTGGCCGACCGTCGCTGCACCTCCTTCGTGCTCGGGCTCGGCGCGTGGATCGCGTCGCGCGGCTGGCGCAA
CGACGTGGCGCCGGATGAGCTCGGCCGCCTCGCCGGGCCGGCCATCGACTTCGCCGGTCACGTGCTGTCGGAGCGGCATC
AGAAGGTGCTCAAGCGCGGCCGCCATTTCAAGAGGCTGCCGGCCGAGCGCCGGCACCGGCTGCGGCTCGCGCTGAAGAAG
CTGCGCTACAGCATCGACTTCTTGCTGCCGCTCTATGGCGCGAGCAAGCCCGTGAAAAAATACGCCAGATCGCTCGCCGA
CCTGCAGGAGCAGCTCGGCTATTACAACGACATGGCGGTGACCGCCGGCGTGATCGCGACGCTCGGCACGACCTCGACCG
ACGCGGCCATCGCCGCCGCCGCGATCACCGGCTGGCATGCGCATGCGATGGCCGGCGTCGAAGATCCGCTGCGCGACGCA
TGGCGTGGCTTCACGAAGACGCCGACGCCGTGGCAACCCGAAGAGGCCTGA

Upstream 100 bases:

>100_bases
GCCCGACGGGGCGAGGGCCTGCAAGAATTGGCACTGTTCCTCGTGGCGGGCTGCGGTTATACGAGAGATGACTGTCATCA
AACGGTTACAGAATCGACCA

Downstream 100 bases:

>100_bases
CGCGTTGTCCAGTCCGGTCGTCGCGGCGTCGCATTGATCTGGTTCAAAGCTCGCCTCCGCGATGTGTGTCAGAGTGAACC
TATGAAAATATCCAGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MPDSNATASIHGTDRAIEAPDAGHAAQSDQSQTAETEQLDGQLNPSEGAADTEAIAPTLPDPEAGGGHEIELKLVVDPAQ
LSGFNASPIVTAHARNKGARKHLKSVYYDTPKQALWKNGFTLRVRQTGARFVQTVKVQHSDDPLKRGEWEASVASLEPDL
SLAAALLPEELRDILTDNKLQPVFTADVHRHARLLDVPNAVIEIAFDNGVIKAGERSEAVSEIELELKSGSPAAIYEIAL
RLAEHGDVRPSIRSKSARGFDLAAGRPPGAEKPRRQDLDPAVSLDEAFAIVLRGSLHHLLQALPATEDGRDPEGVHQLRV
ALRRLRAALHIMRPLGTSAALEGLEADARWLAQNLSAARDLDVFLTQTLPEIADACAVVAGFDTLRSLAERQRELAYRKL
RIALADRRCTSFVLGLGAWIASRGWRNDVAPDELGRLAGPAIDFAGHVLSERHQKVLKRGRHFKRLPAERRHRLRLALKK
LRYSIDFLLPLYGASKPVKKYARSLADLQEQLGYYNDMAVTAGVIATLGTTSTDAAIAAAAITGWHAHAMAGVEDPLRDA
WRGFTKTPTPWQPEEA

Sequences:

>Translated_576_residues
MPDSNATASIHGTDRAIEAPDAGHAAQSDQSQTAETEQLDGQLNPSEGAADTEAIAPTLPDPEAGGGHEIELKLVVDPAQ
LSGFNASPIVTAHARNKGARKHLKSVYYDTPKQALWKNGFTLRVRQTGARFVQTVKVQHSDDPLKRGEWEASVASLEPDL
SLAAALLPEELRDILTDNKLQPVFTADVHRHARLLDVPNAVIEIAFDNGVIKAGERSEAVSEIELELKSGSPAAIYEIAL
RLAEHGDVRPSIRSKSARGFDLAAGRPPGAEKPRRQDLDPAVSLDEAFAIVLRGSLHHLLQALPATEDGRDPEGVHQLRV
ALRRLRAALHIMRPLGTSAALEGLEADARWLAQNLSAARDLDVFLTQTLPEIADACAVVAGFDTLRSLAERQRELAYRKL
RIALADRRCTSFVLGLGAWIASRGWRNDVAPDELGRLAGPAIDFAGHVLSERHQKVLKRGRHFKRLPAERRHRLRLALKK
LRYSIDFLLPLYGASKPVKKYARSLADLQEQLGYYNDMAVTAGVIATLGTTSTDAAIAAAAITGWHAHAMAGVEDPLRDA
WRGFTKTPTPWQPEEA
>Mature_575_residues
PDSNATASIHGTDRAIEAPDAGHAAQSDQSQTAETEQLDGQLNPSEGAADTEAIAPTLPDPEAGGGHEIELKLVVDPAQL
SGFNASPIVTAHARNKGARKHLKSVYYDTPKQALWKNGFTLRVRQTGARFVQTVKVQHSDDPLKRGEWEASVASLEPDLS
LAAALLPEELRDILTDNKLQPVFTADVHRHARLLDVPNAVIEIAFDNGVIKAGERSEAVSEIELELKSGSPAAIYEIALR
LAEHGDVRPSIRSKSARGFDLAAGRPPGAEKPRRQDLDPAVSLDEAFAIVLRGSLHHLLQALPATEDGRDPEGVHQLRVA
LRRLRAALHIMRPLGTSAALEGLEADARWLAQNLSAARDLDVFLTQTLPEIADACAVVAGFDTLRSLAERQRELAYRKLR
IALADRRCTSFVLGLGAWIASRGWRNDVAPDELGRLAGPAIDFAGHVLSERHQKVLKRGRHFKRLPAERRHRLRLALKKL
RYSIDFLLPLYGASKPVKKYARSLADLQEQLGYYNDMAVTAGVIATLGTTSTDAAIAAAAITGWHAHAMAGVEDPLRDAW
RGFTKTPTPWQPEEA

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=214, Percent_Identity=35.0467289719626, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 62702; Mature: 62570

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSNATASIHGTDRAIEAPDAGHAAQSDQSQTAETEQLDGQLNPSEGAADTEAIAPTLP
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
DPEAGGGHEIELKLVVDPAQLSGFNASPIVTAHARNKGARKHLKSVYYDTPKQALWKNGF
CCCCCCCCEEEEEEEECHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCC
TLRVRQTGARFVQTVKVQHSDDPLKRGEWEASVASLEPDLSLAAALLPEELRDILTDNKL
EEEEEHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
QPVFTADVHRHARLLDVPNAVIEIAFDNGVIKAGERSEAVSEIELELKSGSPAAIYEIAL
CCEEEHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHHHHHHEEEECCCCCHHHHHHHH
RLAEHGDVRPSIRSKSARGFDLAAGRPPGAEKPRRQDLDPAVSLDEAFAIVLRGSLHHLL
HHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QALPATEDGRDPEGVHQLRVALRRLRAALHIMRPLGTSAALEGLEADARWLAQNLSAARD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
LDVFLTQTLPEIADACAVVAGFDTLRSLAERQRELAYRKLRIALADRRCTSFVLGLGAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRGWRNDVAPDELGRLAGPAIDFAGHVLSERHQKVLKRGRHFKRLPAERRHRLRLALKK
HCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
LRYSIDFLLPLYGASKPVKKYARSLADLQEQLGYYNDMAVTAGVIATLGTTSTDAAIAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
AITGWHAHAMAGVEDPLRDAWRGFTKTPTPWQPEEA
HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PDSNATASIHGTDRAIEAPDAGHAAQSDQSQTAETEQLDGQLNPSEGAADTEAIAPTLP
CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
DPEAGGGHEIELKLVVDPAQLSGFNASPIVTAHARNKGARKHLKSVYYDTPKQALWKNGF
CCCCCCCCEEEEEEEECHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCC
TLRVRQTGARFVQTVKVQHSDDPLKRGEWEASVASLEPDLSLAAALLPEELRDILTDNKL
EEEEEHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
QPVFTADVHRHARLLDVPNAVIEIAFDNGVIKAGERSEAVSEIELELKSGSPAAIYEIAL
CCEEEHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHHHHHHEEEECCCCCHHHHHHHH
RLAEHGDVRPSIRSKSARGFDLAAGRPPGAEKPRRQDLDPAVSLDEAFAIVLRGSLHHLL
HHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QALPATEDGRDPEGVHQLRVALRRLRAALHIMRPLGTSAALEGLEADARWLAQNLSAARD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
LDVFLTQTLPEIADACAVVAGFDTLRSLAERQRELAYRKLRIALADRRCTSFVLGLGAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRGWRNDVAPDELGRLAGPAIDFAGHVLSERHQKVLKRGRHFKRLPAERRHRLRLALKK
HCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
LRYSIDFLLPLYGASKPVKKYARSLADLQEQLGYYNDMAVTAGVIATLGTTSTDAAIAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
AITGWHAHAMAGVEDPLRDAWRGFTKTPTPWQPEEA
HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]