| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is murI [H]
Identifier: 146339801
GI number: 146339801
Start: 3008140
End: 3008937
Strand: Reverse
Name: murI [H]
Synonym: BRADO2802
Alternate gene names: 146339801
Gene position: 3008937-3008140 (Counterclockwise)
Preceding gene: 146339807
Following gene: 146339800
Centisome position: 40.35
GC content: 70.18
Gene sequence:
>798_bases GTGACCCACCGCCCGACGATTCTTGTGTTCGACTCCGGCCTCGGCGGCCTCAGCGTGTTGCGCGAGGTGGTGCGCGCGCG GCCCGATGCACACTACGTCTATGTGGCCGACGACGCGTTCTTTCCCTACGGCCACCACAGCGAGCCGGCGCTGGTTGCGC GCGTGGTGCCGCTGATGGGCGAGCTGATCTCAGCCCACCGGCCTGACCTGATCGTGATCGCCTGCAACACCGCCTCGGTG CAGACGCTGGCGCCGCTGCGCGCCGCCTATGCGACGCCGTTCGTCGGCACTGTGCCGGCGATCAAGCCGGCCTGCGCGCA ATCCAGGACCAAGCGCGTCTCCGTGCTCGGCACAAAGGCCACGGTGCAGCGGGAATACACCCATGCGCTGATCCGCGACT TCGCGCAGGGCTGCGCCGTGACCTTGGTCGGCTCGCCGGAACTGGCCTCGCTCGCCGAGGCGGCGCTCAGCGGAACCGGC GTCAGCGACGATGCGATCGCCATGGAGATCGCGCCCTGCTTCACCGGCGATGCCGGCGATCCCACCGCCCGCACTGACGC GGTGGTGCTGGCCTGCACGCATTATCCGTTGCTGCTCGACCGGCTGCAGCGGCTGGCGCCCTGGCCAGTCGCCTGGATCG ATCCGGCTCCCGCGATCGCGCGCCGCGTCGTCGACCTGCTCGGCCCGCAGTCGGGCCGCGTCGATCACGGCGGTGCCACC ATGATCTTCACCTCGAACAAGCCGCATCAGCTCAGCCGCGTGCTGACGCCCTATTTCGGCGGCCGCGTGCCCGCCTGA
Upstream 100 bases:
>100_bases CTTCGCGACCACCATTGGAACACATCGGGACGCCCTGCTCCCGGCAAATGCCGCGGAAAAACCCCCTGAACCCAGCGCCA CCATCCGGTACACTCGCGCC
Downstream 100 bases:
>100_bases CGGAGACATGCCGATGTCCGCAACGCCCAAGCCGCTCAACCGCCTCAAACAGGCCTGGCGCGACAAGCGGCCGACCTTCG GCGCCATCGCCACCATTCCG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTHRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELISAHRPDLIVIACNTASV QTLAPLRAAYATPFVGTVPAIKPACAQSRTKRVSVLGTKATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTG VSDDAIAMEIAPCFTGDAGDPTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHGGAT MIFTSNKPHQLSRVLTPYFGGRVPA
Sequences:
>Translated_265_residues MTHRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELISAHRPDLIVIACNTASV QTLAPLRAAYATPFVGTVPAIKPACAQSRTKRVSVLGTKATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTG VSDDAIAMEIAPCFTGDAGDPTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHGGAT MIFTSNKPHQLSRVLTPYFGGRVPA >Mature_264_residues THRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMGELISAHRPDLIVIACNTASVQ TLAPLRAAYATPFVGTVPAIKPACAQSRTKRVSVLGTKATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGV SDDAIAMEIAPCFTGDAGDPTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHGGATM IFTSNKPHQLSRVLTPYFGGRVPA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=258, Percent_Identity=42.2480620155039, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 28146; Mature: 28015
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMG CCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELISAHRPDLIVIACNTASVQTLAPLRAAYATPFVGTVPAIKPACAQSRTKRVSVLGTKA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCEEEEEECHH TVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGD HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC PTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHGGAT CCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEE MIFTSNKPHQLSRVLTPYFGGRVPA EEEECCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure THRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMG CCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELISAHRPDLIVIACNTASVQTLAPLRAAYATPFVGTVPAIKPACAQSRTKRVSVLGTKA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCEEEEEECHH TVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAGD HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC PTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHGGAT CCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEE MIFTSNKPHQLSRVLTPYFGGRVPA EEEECCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA