| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339783
Identifier: 146339783
GI number: 146339783
Start: 2991312
End: 2991794
Strand: Reverse
Name: 146339783
Synonym: BRADO2784
Alternate gene names: NA
Gene position: 2991794-2991312 (Counterclockwise)
Preceding gene: 146339785
Following gene: 146339775
Centisome position: 40.12
GC content: 68.12
Gene sequence:
>483_bases GTGCACGATCTGTCCCGGTCCGCCTTCGAGAACCGCCCTGGCATCCACATCGCGACCGACGGCGAGTTCGCCGGCTGGCG CACCTGGATGCGCGACAGCTACGAATCCCACACCGGCCCGTTCTGGCACCGGATGGAGGAGGACGGCGCGATCCGCTGCG CTTTCCGGGTCGAGAAGAAGCACCTCAACGGCGCCGGCAACGTCCATGGCGGCTGCCTGATGACCTTCGCGGACTACTGC CTGTTCGCCTTCGCCGCCCCGATTCTGCAAGGCCCGGGCGTGACGGTATCGTTCTCGTCCGAGTTCCTCGATGCCGCGCG CGAGGGCGAGCTGATCGAGGCCACCGGCGAGGTCACCCGCGCCGGCGCCTCGCTGATCTTCCTGCGCGGCATGCTGCATT CCGGGACCAAGCCGCTGTTCTCGTTTTCCGGGACGATCAAGCGGGTGAAGCGGCGGACGCCGGAGACGGCGAGTTCGCCG TAG
Upstream 100 bases:
>100_bases CCCTGTCCAGAGCTTTGGTCCGGACCGTCTGGCGGGATATTTGCAGATTATCGGTTGATCGGATTTAAGACGGTCAATCA ACAGTTAAAGGCTCCTTCAC
Downstream 100 bases:
>100_bases GGCGAAAATCGTAGCCCGGGTGAGCGCAGCAATACCCGGGTTCTCGCACACAGCTCATGTGAACCCGGATGTCGCTGCGC TCATCCGGGCTACGGCCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MHDLSRSAFENRPGIHIATDGEFAGWRTWMRDSYESHTGPFWHRMEEDGAIRCAFRVEKKHLNGAGNVHGGCLMTFADYC LFAFAAPILQGPGVTVSFSSEFLDAAREGELIEATGEVTRAGASLIFLRGMLHSGTKPLFSFSGTIKRVKRRTPETASSP
Sequences:
>Translated_160_residues MHDLSRSAFENRPGIHIATDGEFAGWRTWMRDSYESHTGPFWHRMEEDGAIRCAFRVEKKHLNGAGNVHGGCLMTFADYC LFAFAAPILQGPGVTVSFSSEFLDAAREGELIEATGEVTRAGASLIFLRGMLHSGTKPLFSFSGTIKRVKRRTPETASSP >Mature_160_residues MHDLSRSAFENRPGIHIATDGEFAGWRTWMRDSYESHTGPFWHRMEEDGAIRCAFRVEKKHLNGAGNVHGGCLMTFADYC LFAFAAPILQGPGVTVSFSSEFLDAAREGELIEATGEVTRAGASLIFLRGMLHSGTKPLFSFSGTIKRVKRRTPETASSP
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17639; Mature: 17639
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDLSRSAFENRPGIHIATDGEFAGWRTWMRDSYESHTGPFWHRMEEDGAIRCAFRVEKK CCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEHH HLNGAGNVHGGCLMTFADYCLFAFAAPILQGPGVTVSFSSEFLDAAREGELIEATGEVTR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCEEECCCHHHH AGASLIFLRGMLHSGTKPLFSFSGTIKRVKRRTPETASSP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHDLSRSAFENRPGIHIATDGEFAGWRTWMRDSYESHTGPFWHRMEEDGAIRCAFRVEKK CCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEHH HLNGAGNVHGGCLMTFADYCLFAFAAPILQGPGVTVSFSSEFLDAAREGELIEATGEVTR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCEEECCCHHHH AGASLIFLRGMLHSGTKPLFSFSGTIKRVKRRTPETASSP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA