| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mmgC [H]
Identifier: 146339769
GI number: 146339769
Start: 2979224
End: 2980345
Strand: Direct
Name: mmgC [H]
Synonym: BRADO2769
Alternate gene names: 146339769
Gene position: 2979224-2980345 (Clockwise)
Preceding gene: 146339768
Following gene: 146339770
Centisome position: 39.95
GC content: 66.49
Gene sequence:
>1122_bases ATGGGTTCACTCGGACAGCATCTGGCGGTCAATCGTGCGGGCGTGACGCCCGTGCCGTCGATCGCGGAGCAGGTGGCGGC GATCGCGCGCACGGAGCTCGCGCCGCTCGCCTCTGGCATCGACGCCGGCACGGTGTATCCTGCCGACGTACTCCGCCGCT TCGGAGAGGTCGGCGCGTGGAGCAGCCACGTGCCTGACGGCGGAAGAGCGGATCTCAACAGCGCGATCGCGTCGATCGCG GCGATCGGCGAGGTCTGCGGCGCTTCCGCCTTCATGGCGTGGTGCCAGAACACGCTGGTCTGGTACATCGCCAATTCCGG CAACAAGGCGCTGGTTGATCGTCTGCTCGACGATGCTGCCAGCGGCCGATTGCTCGGCGGCACCGGGCTTTCGAACCCGA TGAAGAGCTTCTTCGGAATCGAGAAGCTCAAATTGAAGGGGAGAAAGGTCGACGGCGGCTACGTCGTGCGTGGCGCGCTG CCCTGGGTCTCCAATCTCGGGCCGGACCACATGTTCGGCACGATCTTCGAGCGCGAGGATGCGCCCGGCGAGATCGTGAT GTTCGTCGCCGACTGCGCCGATCCGGCGGTGACCTTGCAGCCGTGTCAGCCGTTCCTCGCGATGGACGGCACTGGCACCT ACGGCATCCAGTTCCGCGACCTGTTCGTGCCGGACGAACTGATCCTCGCCGATCCTGCGGGACCGTTCGTCAAGAAGATC CGCGCCGGCTTCATCCTGCTGCAGGCCGGCATGGCGCTCGGCCTGATCAAGGACTGCATCAAGATCATGCACGAGGTCGA GGCGCCGCTCGGCCACATCAACCGCTATCTGCCGCAACAGCCGGTCGATTTCAGCGCGCTCGCCGACGAGCTCGCCAAGG AGACGGCTGAGCTCGCCGGCGATCCCTACAACACGGACGAGACCTACTGGCGCAAGGTGGTCGCGCTGCGGCTGCGGGCC GGCGAGGCCAGCGTCGCTGCCGCTCACGCCGCGATGCTCCATTGCGGAGCGCGCGGCTACATCAAGGGCAATCGCGCCGA ACGTCGCCTGCGCGAGGCCTATTTCGTCGCGATCGTGACTCCCGCGACCAAACAGCTCCGCAAGATGCTCGCCGACGGCT GA
Upstream 100 bases:
>100_bases GTCAAGAAGTGGTCGCCCGTCGCCAACACCTTCACGCGCCCGGTCAATCTCGAAGTCGGCATCTGAGCTGGGCTTGCCGA CTGAGGCAGCGGAGGATGTG
Downstream 100 bases:
>100_bases CGCCGGCGAGGACGGCAAACCAACAAATCCCATCCAGGAGAGGCCTGCCATGACGGACGTTCTGATTACTGCCGGCGAAC TCGCCGAGTTCATCAAGACC
Product: putative acyl-CoA dehydrogenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGSLGQHLAVNRAGVTPVPSIAEQVAAIARTELAPLASGIDAGTVYPADVLRRFGEVGAWSSHVPDGGRADLNSAIASIA AIGEVCGASAFMAWCQNTLVWYIANSGNKALVDRLLDDAASGRLLGGTGLSNPMKSFFGIEKLKLKGRKVDGGYVVRGAL PWVSNLGPDHMFGTIFEREDAPGEIVMFVADCADPAVTLQPCQPFLAMDGTGTYGIQFRDLFVPDELILADPAGPFVKKI RAGFILLQAGMALGLIKDCIKIMHEVEAPLGHINRYLPQQPVDFSALADELAKETAELAGDPYNTDETYWRKVVALRLRA GEASVAAAHAAMLHCGARGYIKGNRAERRLREAYFVAIVTPATKQLRKMLADG
Sequences:
>Translated_373_residues MGSLGQHLAVNRAGVTPVPSIAEQVAAIARTELAPLASGIDAGTVYPADVLRRFGEVGAWSSHVPDGGRADLNSAIASIA AIGEVCGASAFMAWCQNTLVWYIANSGNKALVDRLLDDAASGRLLGGTGLSNPMKSFFGIEKLKLKGRKVDGGYVVRGAL PWVSNLGPDHMFGTIFEREDAPGEIVMFVADCADPAVTLQPCQPFLAMDGTGTYGIQFRDLFVPDELILADPAGPFVKKI RAGFILLQAGMALGLIKDCIKIMHEVEAPLGHINRYLPQQPVDFSALADELAKETAELAGDPYNTDETYWRKVVALRLRA GEASVAAAHAAMLHCGARGYIKGNRAERRLREAYFVAIVTPATKQLRKMLADG >Mature_372_residues GSLGQHLAVNRAGVTPVPSIAEQVAAIARTELAPLASGIDAGTVYPADVLRRFGEVGAWSSHVPDGGRADLNSAIASIAA IGEVCGASAFMAWCQNTLVWYIANSGNKALVDRLLDDAASGRLLGGTGLSNPMKSFFGIEKLKLKGRKVDGGYVVRGALP WVSNLGPDHMFGTIFEREDAPGEIVMFVADCADPAVTLQPCQPFLAMDGTGTYGIQFRDLFVPDELILADPAGPFVKKIR AGFILLQAGMALGLIKDCIKIMHEVEAPLGHINRYLPQQPVDFSALADELAKETAELAGDPYNTDETYWRKVVALRLRAG EASVAAAHAAMLHCGARGYIKGNRAERRLREAYFVAIVTPATKQLRKMLADG
Specific function: Unknown
COG id: COG1960
COG function: function code I; Acyl-CoA dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Drosophila melanogaster, GI21356377, Length=363, Percent_Identity=23.4159779614325, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006092 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 39803; Mature: 39672
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLGQHLAVNRAGVTPVPSIAEQVAAIARTELAPLASGIDAGTVYPADVLRRFGEVGAW CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC SSHVPDGGRADLNSAIASIAAIGEVCGASAFMAWCQNTLVWYIANSGNKALVDRLLDDAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH SGRLLGGTGLSNPMKSFFGIEKLKLKGRKVDGGYVVRGALPWVSNLGPDHMFGTIFERED CCCEECCCCCCHHHHHHHCCHHHHCCCEECCCCEEEEECCHHHHCCCCCHHHHHHHCCCC APGEIVMFVADCADPAVTLQPCQPFLAMDGTGTYGIQFRDLFVPDELILADPAGPFVKKI CCCCEEEEEECCCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCHHHHHH RAGFILLQAGMALGLIKDCIKIMHEVEAPLGHINRYLPQQPVDFSALADELAKETAELAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC DPYNTDETYWRKVVALRLRAGEASVAAAHAAMLHCGARGYIKGNRAERRLREAYFVAIVT CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEC PATKQLRKMLADG CHHHHHHHHHCCC >Mature Secondary Structure GSLGQHLAVNRAGVTPVPSIAEQVAAIARTELAPLASGIDAGTVYPADVLRRFGEVGAW CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC SSHVPDGGRADLNSAIASIAAIGEVCGASAFMAWCQNTLVWYIANSGNKALVDRLLDDAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH SGRLLGGTGLSNPMKSFFGIEKLKLKGRKVDGGYVVRGALPWVSNLGPDHMFGTIFERED CCCEECCCCCCHHHHHHHCCHHHHCCCEECCCCEEEEECCHHHHCCCCCHHHHHHHCCCC APGEIVMFVADCADPAVTLQPCQPFLAMDGTGTYGIQFRDLFVPDELILADPAGPFVKKI CCCCEEEEEECCCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCHHHHHH RAGFILLQAGMALGLIKDCIKIMHEVEAPLGHINRYLPQQPVDFSALADELAKETAELAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC DPYNTDETYWRKVVALRLRAGEASVAAAHAAMLHCGARGYIKGNRAERRLREAYFVAIVT CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEC PATKQLRKMLADG CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]