| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339768
Identifier: 146339768
GI number: 146339768
Start: 2978647
End: 2979189
Strand: Direct
Name: 146339768
Synonym: BRADO2768
Alternate gene names: NA
Gene position: 2978647-2979189 (Clockwise)
Preceding gene: 146339766
Following gene: 146339769
Centisome position: 39.95
GC content: 64.09
Gene sequence:
>543_bases ATGACCGCTGTGGTTCAGAAGACGGCGTTGACGGGTTGCCTCGCCCCCATCGACAAGGGCGGCCTCGAGCAGCTCATCGC CAACGGCAAGGCCAACCCCAAGGTCATCAAGACACTGAAGTGCAAGACCGTCGCGGAAGGCAAGTTCCGTCACGCCAACT ACATCCGCAATCTCGCGCCCTACATCGTCGATGAGCCGCCGGGCCTGCTCGGCGACGACACCGCGCCGAATCCGTCGGAA GCTTCGCTCGCCGCGCTTGGCTCGTGCCTCGCGGTCGGCCTGCACGCCAACGCCGTGCATCGCGGCTGGACCGTCAACAA GCTCGAGCTGGAGCTCGAGGGTGATCTCAACATCACCGCCGTCTGGGGCACCGGCGACGTCAGCGAGAAGCCGGTCGGCT TCACCGATGTGCGCGTCAAGGTCGACATGGAATGCGAGGGCATTCCGCAGGCGGAAATCCAGGCGTTGATCGATCACGTC AAGAAGTGGTCGCCCGTCGCCAACACCTTCACGCGCCCGGTCAATCTCGAAGTCGGCATCTGA
Upstream 100 bases:
>100_bases GCCGCGAGGATCATTCCGCCTTTTGATTTTCAGGCTCCCTGGCACGCTTCGTGCAGGAAACAGACCGTTCGGTATCCTCG ATCCCAGGGAGAGAAAAGAG
Downstream 100 bases:
>100_bases GCTGGGCTTGCCGACTGAGGCAGCGGAGGATGTGATGGGTTCACTCGGACAGCATCTGGCGGTCAATCGTGCGGGCGTGA CGCCCGTGCCGTCGATCGCG
Product: putative osmC/ohr family protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC/Ohr Family Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTAVVQKTALTGCLAPIDKGGLEQLIANGKANPKVIKTLKCKTVAEGKFRHANYIRNLAPYIVDEPPGLLGDDTAPNPSE ASLAALGSCLAVGLHANAVHRGWTVNKLELELEGDLNITAVWGTGDVSEKPVGFTDVRVKVDMECEGIPQAEIQALIDHV KKWSPVANTFTRPVNLEVGI
Sequences:
>Translated_180_residues MTAVVQKTALTGCLAPIDKGGLEQLIANGKANPKVIKTLKCKTVAEGKFRHANYIRNLAPYIVDEPPGLLGDDTAPNPSE ASLAALGSCLAVGLHANAVHRGWTVNKLELELEGDLNITAVWGTGDVSEKPVGFTDVRVKVDMECEGIPQAEIQALIDHV KKWSPVANTFTRPVNLEVGI >Mature_179_residues TAVVQKTALTGCLAPIDKGGLEQLIANGKANPKVIKTLKCKTVAEGKFRHANYIRNLAPYIVDEPPGLLGDDTAPNPSEA SLAALGSCLAVGLHANAVHRGWTVNKLELELEGDLNITAVWGTGDVSEKPVGFTDVRVKVDMECEGIPQAEIQALIDHVK KWSPVANTFTRPVNLEVGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19187; Mature: 19056
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVVQKTALTGCLAPIDKGGLEQLIANGKANPKVIKTLKCKTVAEGKFRHANYIRNLAP CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCEECCCCCHHHHHHHHHCC YIVDEPPGLLGDDTAPNPSEASLAALGSCLAVGLHANAVHRGWTVNKLELELEGDLNITA EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEECCEEEEE VWGTGDVSEKPVGFTDVRVKVDMECEGIPQAEIQALIDHVKKWSPVANTFTRPVNLEVGI EECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEECC >Mature Secondary Structure TAVVQKTALTGCLAPIDKGGLEQLIANGKANPKVIKTLKCKTVAEGKFRHANYIRNLAP CCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCEECCCCCHHHHHHHHHCC YIVDEPPGLLGDDTAPNPSEASLAALGSCLAVGLHANAVHRGWTVNKLELELEGDLNITA EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEECCEEEEE VWGTGDVSEKPVGFTDVRVKVDMECEGIPQAEIQALIDHVKKWSPVANTFTRPVNLEVGI EECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA