Click here to switch to the map view.

The map label for this gene is 146339767

Identifier: 146339767

GI number: 146339767

Start: 2977709

End: 2978398

Strand: Reverse

Name: 146339767

Synonym: BRADO2767

Alternate gene names: NA

Gene position: 2978398-2977709 (Counterclockwise)

Preceding gene: 146339775

Following gene: 146339761

Centisome position: 39.94

GC content: 66.23

Gene sequence:

>690_bases
ATGGGCAGATCGATGGGCAAGTCAGCTGCGGGCAAACAGACGGGGAAGACGCAGGCGATCGCGCGGCCGATCGCCGCGGG
AGATGATGAATCCGCGCGCGGCCGCCTGCTCGGCGCGGCGACGCACCTCTTCTGCAAGAACGGCATCAACGCGACCGGCA
TCGACGCCATCATCAGCGAGGCCGGCACGGCGAAAACCACGCTCTACAAGCTGTTCGGATCGAAGACCGCGCTCGTCACC
GCCGTGCTCGAGAGCGAAGGCAGGCAGTGGCGGGAATGGTTCATCGGCGCGATGGAGAGCGGCGGCGGCGATGCCGAGAC
CAAGCTCGCGCGCATCTTTCCGGCGCTGAAGAGCTGGTTCAGCGAGGAGCGGTTCTACGGTTGCCCTTTCATCAATGCGG
TCGGCGAGCACGACAAGGATCAGAAGCAGTTCCGCAGCATCGCGATGCGCCACAAGAAGGTGGTGCTGGCGCATATCGAG
AAGCTGGCGCGCGAGATGGGTGCGGTCGAGCCGGAGAGTTTTGCGCATCAGCTGGCGCTGCTGATCGACGGCGCCATCGT
CGCCGCGATGGTGTCGCGCAATCCGGAGGTCGCGGACACGGCCGGCATCGCGGCGAGCGCGCTGTTCGAGCCGGCGAAGC
AGAAGGTCAGGCGCGCTGGAAAAGCCGATCCGCAGCTGGCGGCGGTGTGA

Upstream 100 bases:

>100_bases
ATGCACAATGCTGCTATCAGCGATGAAATTGAGCGCAGCGCCGCCGCATCAGCATCAGCGGCCTTGCTGACTCACGCGCA
CAGCGATTAAGCTTGCGCCC

Downstream 100 bases:

>100_bases
GCCAATCCGATCGTCGTCGTTACCTTACGCTTGTATCTGGTCTGCGAGCTCTTCGTTTGAGGAGAGCTATTTCCGCGCGT
CATTGCGAGCGCAGCGAAGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR/AcrR-Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein; Transcriptional Repressor

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGRSMGKSAAGKQTGKTQAIARPIAAGDDESARGRLLGAATHLFCKNGINATGIDAIISEAGTAKTTLYKLFGSKTALVT
AVLESEGRQWREWFIGAMESGGGDAETKLARIFPALKSWFSEERFYGCPFINAVGEHDKDQKQFRSIAMRHKKVVLAHIE
KLAREMGAVEPESFAHQLALLIDGAIVAAMVSRNPEVADTAGIAASALFEPAKQKVRRAGKADPQLAAV

Sequences:

>Translated_229_residues
MGRSMGKSAAGKQTGKTQAIARPIAAGDDESARGRLLGAATHLFCKNGINATGIDAIISEAGTAKTTLYKLFGSKTALVT
AVLESEGRQWREWFIGAMESGGGDAETKLARIFPALKSWFSEERFYGCPFINAVGEHDKDQKQFRSIAMRHKKVVLAHIE
KLAREMGAVEPESFAHQLALLIDGAIVAAMVSRNPEVADTAGIAASALFEPAKQKVRRAGKADPQLAAV
>Mature_228_residues
GRSMGKSAAGKQTGKTQAIARPIAAGDDESARGRLLGAATHLFCKNGINATGIDAIISEAGTAKTTLYKLFGSKTALVTA
VLESEGRQWREWFIGAMESGGGDAETKLARIFPALKSWFSEERFYGCPFINAVGEHDKDQKQFRSIAMRHKKVVLAHIEK
LAREMGAVEPESFAHQLALLIDGAIVAAMVSRNPEVADTAGIAASALFEPAKQKVRRAGKADPQLAAV

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24439; Mature: 24308

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSMGKSAAGKQTGKTQAIARPIAAGDDESARGRLLGAATHLFCKNGINATGIDAIISE
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
AGTAKTTLYKLFGSKTALVTAVLESEGRQWREWFIGAMESGGGDAETKLARIFPALKSWF
CCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SEERFYGCPFINAVGEHDKDQKQFRSIAMRHKKVVLAHIEKLAREMGAVEPESFAHQLAL
HHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIDGAIVAAMVSRNPEVADTAGIAASALFEPAKQKVRRAGKADPQLAAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GRSMGKSAAGKQTGKTQAIARPIAAGDDESARGRLLGAATHLFCKNGINATGIDAIISE
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
AGTAKTTLYKLFGSKTALVTAVLESEGRQWREWFIGAMESGGGDAETKLARIFPALKSWF
CCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SEERFYGCPFINAVGEHDKDQKQFRSIAMRHKKVVLAHIEKLAREMGAVEPESFAHQLAL
HHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIDGAIVAAMVSRNPEVADTAGIAASALFEPAKQKVRRAGKADPQLAAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA