| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339751
Identifier: 146339751
GI number: 146339751
Start: 2956894
End: 2958558
Strand: Reverse
Name: 146339751
Synonym: BRADO2751
Alternate gene names: NA
Gene position: 2958558-2956894 (Counterclockwise)
Preceding gene: 146339753
Following gene: 146339750
Centisome position: 39.68
GC content: 70.21
Gene sequence:
>1665_bases ATGTCGGCATTGCGCTACCTCTTAGTTCTCATGCTGCTGCTGCTGGGCAGCAGCACGGCCGCGCTGGCCGAGAAGCGGGT CGCGCTGGTGATCGGCAATTCAACCTACAAGACCGTCGCCCGGCTATCGAACCCCGCCAATGATGCGAAGCTCGTCGGCG ACATGTTCCGCAACGCCGGCTTCGAGCGCGTCGATGTCAGGCTGGATCTCGGCGTGCAGGAGATGCGCCGTGCCTTGCGC GAATTCGGCGCGCGGGCGCGCGAGGCGGAGGTGGCCGTGATCTACTACGCCGGCCACGGCATCGAGCTCGACGGCGTCAA CTACCTGATCCCGACCGACGCCTCGCTCGAGGCCGACAGCGACGTGCTCGACGAGGCGATCGCGCTGGACCGCGTGCTGT TCGCGATCGAGCCCGCCAGGCAGCTGCGCCTCGTCGTGCTCGACGCCTGCCGCGACAACCCGTTCGCCAAGACGATGAAG CGCAGCATCGCCTCGCGCAGCGTCGGACGTGGACTCGCCAAGGTCGAGCCGTCGAGCCCGAACACGATGATCGCGTTCTC CGCCAAGGCCGGCTCGACCGCCGCCGACGGCGATGCCAGCAACAGCCCCTACGCGATGGCGCTGGTCACACATCTGCCGA AGCCCGGCCTCGATCTGCGCCGGGCCTTCGGCTTCGTCCGCGATGACGTGCTGAAGGCGACCGGCTATCGGCAGGAGCCC TATGTCTACGGCTCGCTCGGCGGCAACGACGTCGCGCTGGTGCCGGCAGCACCATCCCCGAGCGCGGCCACCGATCCCGA CGCGGGGATGCGGCGCGACTACGAGCTGGCGGAACGCGCCGGCAGCCCGGCGGCGTTCGACGCGTTTCTCGAAAAATACC CCACCGGCTTCTACGCCACCCTCGCCAAGGCGCAGCGCGCCAAGCTGTCGCCGACCGCCGCCGCAAAGCCCGCCGAGTTG GCGCGCGCCCCCGAGGCTGCGGCCCCCGAGGTTACGCGCAGCCCGCCCGATCCGGCCCAGCAGCCCGAGAAGCCGGCCCC CTCCTCCGCACCGACTGCGGTCGCGGCGGTACAGCCTCCCCCCGCGACGCCGACGGCCGCGCCGCCGCCTGATCTGCCGC GCCTGCTCGCCGCGGAACTGCGCCGCGTCGGCTGCAGCACCGCCGACAACGACGGCACTTGGGATCTCCATGCGCGCCGG GCGCTGGAGCGCTTCAACAAGCAGGCCGGAACCAGGTTCGACGTCCAGGTCGCGAGTATCGATGCGCTGGGGGCCGTGAA GGCGAAGACATCACGCATCTGTCCCCTGCTCTGCGGCAAGGGCCAGCGCGCCGAGGACGAGGCCTGCGTCAAGATCACCT GTCCCGCGGGTCAGGCGCTGGATGAGGATGGCGACTGCGTCAGGCGCAAGGGCGAGCCCGTCACCAAGAAGCCCGAGGAG CCGGCGCGAAAGAAGGAGCCCGCGATGGCGATGCGCTCCGAGTCGGAGACCCGGCGCGCCAGCAGCGGCGGCCGCTGTAC CAGCATCAATCAGCGCTGCGCGATTCAGATCGGCGGCCGCTGCAATGCCGCCACGGGCGCATGGGAGTACGGCCGCAATG GTGCCGGCGGCGACACGATGTCGTTCAACAACTGCGTCAGCCGGATGATGGCCGGGGGCCGGTGA
Upstream 100 bases:
>100_bases GGCAGAGGCCGGCGCCGCGAGCCTGTCCGCGCACCTTGCGTGGCCGACATGGCTGGATAGTGTGTCACAGCCTCGACCGT GGGTATTGTCCGGGAAACCA
Downstream 100 bases:
>100_bases GCCGCGACGCTGCCCGGAGCGCTCAGCTTCATTGTGAGCGAGACAACTGGAACGATCTGGAAACGGATTGAAAACCCGCT CACAATGCGCGTCCCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALR EFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMK RSIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAEL ARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARR ALERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR
Sequences:
>Translated_554_residues MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALR EFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMK RSIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAEL ARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARR ALERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR >Mature_553_residues SALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAGFERVDVRLDLGVQEMRRALRE FGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADSDVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKR SIASRSVGRGLAKVEPSSPNTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEPY VYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYATLAKAQRAKLSPTAAAKPAELA RAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPPPATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRA LERFNKQAGTRFDVQVASIDALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEEP ARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTMSFNNCVSRMMAGGR
Specific function: Unknown
COG id: COG4249
COG function: function code R; Uncharacterized protein containing caspase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58841; Mature: 58710
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS50208 CASPASE_P20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAG CHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC FERVDVRLDLGVQEMRRALREFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADS CEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCH DVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKRSIASRSVGRGLAKVEPSSP HHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC NTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP CEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYAT EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHH LAKAQRAKLSPTAAAKPAELARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPP HHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRALERFNKQAGTRFDVQVASI CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECC DALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE HHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTM CHHHCCCHHHHHCCHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC SFNNCVSRMMAGGR CHHHHHHHHHCCCC >Mature Secondary Structure SALRYLLVLMLLLLGSSTAALAEKRVALVIGNSTYKTVARLSNPANDAKLVGDMFRNAG HHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC FERVDVRLDLGVQEMRRALREFGARAREAEVAVIYYAGHGIELDGVNYLIPTDASLEADS CEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCH DVLDEAIALDRVLFAIEPARQLRLVVLDACRDNPFAKTMKRSIASRSVGRGLAKVEPSSP HHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC NTMIAFSAKAGSTAADGDASNSPYAMALVTHLPKPGLDLRRAFGFVRDDVLKATGYRQEP CEEEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC YVYGSLGGNDVALVPAAPSPSAATDPDAGMRRDYELAERAGSPAAFDAFLEKYPTGFYAT EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHH LAKAQRAKLSPTAAAKPAELARAPEAAAPEVTRSPPDPAQQPEKPAPSSAPTAVAAVQPP HHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PATPTAAPPPDLPRLLAAELRRVGCSTADNDGTWDLHARRALERFNKQAGTRFDVQVASI CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECC DALGAVKAKTSRICPLLCGKGQRAEDEACVKITCPAGQALDEDGDCVRRKGEPVTKKPEE HHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC PARKKEPAMAMRSESETRRASSGGRCTSINQRCAIQIGGRCNAATGAWEYGRNGAGGDTM CHHHCCCHHHHHCCHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC SFNNCVSRMMAGGR CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA