| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339718
Identifier: 146339718
GI number: 146339718
Start: 2913806
End: 2914390
Strand: Reverse
Name: 146339718
Synonym: BRADO2716
Alternate gene names: NA
Gene position: 2914390-2913806 (Counterclockwise)
Preceding gene: 146339719
Following gene: 146339717
Centisome position: 39.08
GC content: 64.79
Gene sequence:
>585_bases ATGATCCGGCTGCTGTTCACCATCGTGGTCGGCGTGCTGCTCGGCGGCGTGGTCCATCTCGTCAGCGTGCTGGCGCTGCC GCGGATCTCGACGCAGGACGCCTATTCGCGGCTGACGCCGATGACCAAGCTGAACGCCGTCACGCAGCTGCCGCTCGCCG ATCCCAACAATTCGCCGATGCCGTTCATGGACCCGGCCTTCGCGATGGCGATCTGCCGTTACGATCTGTCCGACGGTCCG CTCAAGCTGACGGTGCCTGTGAGCCAAGCCTATACATCGGTGTCGTTCTACACGCGCAACGAGCTTGCCTATTACGCGAT CAACGATCGTTCTGCAGGCAAGCGCGTCATCGAGCTGGATCTGATGACCGAAGCTCAGCACGAGGATCTGCCGGAGGACG AGGAGGTCACGGCCGCCGACCGTCTGATCATCGATTCGCCGACGACGACCGGCCTGATCGTGCTGAAAGCGCTCGCGGCC GAACCCGGCCTCATGCCGCAGGCGCAGGCTTCCCTTGCTGCAGCGACCTGTGGCCCGCAGGCCGAAGCGCCGGCGAAGAC CGAAAAGCCGCGCGGCAAGCGCTAG
Upstream 100 bases:
>100_bases ACGCGCTGATGCTGCGCCTCTACGACACGCCGGTGGGCGTGGCCACGCGCACCCAGCGCGACGCGCCGATGCCCGCGATC ACCACCGTGGGCTGCCCGTC
Downstream 100 bases:
>100_bases GCGGTAAGAGGTTAAGCAGACCTTCGATCAATTCGACAACGCGCTCTTCATCCTTCGTGGCATAGTGATTGTCTCGCCCC GCTGCTATGACATATCAGGA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPMPFMDPAFAMAICRYDLSDGP LKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELDLMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAA EPGLMPQAQASLAAATCGPQAEAPAKTEKPRGKR
Sequences:
>Translated_194_residues MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPMPFMDPAFAMAICRYDLSDGP LKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELDLMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAA EPGLMPQAQASLAAATCGPQAEAPAKTEKPRGKR >Mature_194_residues MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPMPFMDPAFAMAICRYDLSDGP LKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELDLMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAA EPGLMPQAQASLAAATCGPQAEAPAKTEKPRGKR
Specific function: Unknown
COG id: COG5436
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20909; Mature: 20909
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPM CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCC PFMDPAFAMAICRYDLSDGPLKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELD CCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHEEEEEECCCEEEEEECCCCCCCEEEEEE LMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAAEPGLMPQAQASLAAATCGPQ EECCCHHCCCCCCCCCHHHCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC AEAPAKTEKPRGKR CCCCCCCCCCCCCC >Mature Secondary Structure MIRLLFTIVVGVLLGGVVHLVSVLALPRISTQDAYSRLTPMTKLNAVTQLPLADPNNSPM CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCC PFMDPAFAMAICRYDLSDGPLKLTVPVSQAYTSVSFYTRNELAYYAINDRSAGKRVIELD CCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHEEEEEECCCEEEEEECCCCCCCEEEEEE LMTEAQHEDLPEDEEVTAADRLIIDSPTTTGLIVLKALAAEPGLMPQAQASLAAATCGPQ EECCCHHCCCCCCCCCHHHCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC AEAPAKTEKPRGKR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA