| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mutA [H]
Identifier: 146339687
GI number: 146339687
Start: 2882724
End: 2884583
Strand: Reverse
Name: mutA [H]
Synonym: BRADO2682
Alternate gene names: 146339687
Gene position: 2884583-2882724 (Counterclockwise)
Preceding gene: 146339688
Following gene: 146339686
Centisome position: 38.69
GC content: 70.32
Gene sequence:
>1860_bases ATGACCACCGACACCGAACAGCTGCGATTGGCCGCCGATTTCGCGCCGGCTAGCGAGGCGGACTGGCGCAAGCTGGTCGA CGGCGTGTTGAAGGGCGCGGCGTTCGAGAAGCTGGTCGGCAAGACCTATGACGGCCTGAAGATCCAGCCGATCTATTCGC GCGCCCAGGGCGCCGCGCCGGTCGCCGGCCGCGCGCCGGCGGCGGCGTGGCAGATCATGCAGCGCGTCGACCATCGCGAT GCCGGCAAGGCCAATGCGCAGGCGCTGCTCGACCTCGAAAACGGCGCGACCGGGCTGACGCTGGTATTCGCCGGCGCCAA CGCCGCGCATGGCTTCGGCCTCGCCGCCACCGCGGACGCGCTGGCCCGCGCGCTGGATGGCGTGCATCTCGACGCTGCGA TTGCCATCGAATTGCAGGCAACTGACGCATCTGCCGCCGCACTGCTCGCGGACTACGTCAAGCAGCGCGGGTTCAAGCCG GGCGCTTGCGACATCCGCTTCGGCCTCGATCCGATCGGCGATGCAGCCAGTAGCGGCGCGAGCGCCCATGATGCGGGCGC GCTTGCCGGCAGCGCCGTCGACTTGGTGAAGCAATTGCACGGCGCCGGCTTCCAGGGTCCCTTCCTGGCCGCGGATGGCC GCGTGGTGCACGACGCCGGTGGTTCGGAGGCGCAGGAGCTCGCCTTCGTGCTGGCCTCCGGCGTCGCCTATCTGCGGGCG CTCGAAGCGGGCGGCATCGCGTTGGAGACCGCGCGTGGCCTGATCTTCGCGCGGCTCGCGGCCGATACTGATCAGTTCCT GACGCTGGCGAAATTCCGTAGCCTGCGCCGGCTTTGGGCGCGCATCGAAGAGGCCTGCGGCCTGCAACCGAAGCCGCTCG TCGTCTCCGGCGAGACGGCGTGGCGCATGCTCACCCGGCGCGATCCCTATGTGAACATGCTGCGCGCCACCATCGCGACG CTCGCCGCGGGCCTCGGCGGCGCCAATGCGATCACCGTGCTGCCGCACACCGCAGCGCTCGGACTGCCCGATGCGTTTGC TCGCCGCGTCGCGCGCAACACGCAGCTGGTGCTGCTTGAGGAGAGCAATCTCGCCCGCGTCGCCGATCCCGCGGCCGGCG CCGGCGGCATCGAGGCGCTGACGAGCGAGTTGAGCACCACCGCCTGGGCGCTGTTCCAGGAGATCGAGAAGGCCGGCGGG ATCGTCGCCGCGCTGCAGGCCGGCCTGATCCAGAGCAAGGTCGCCGCCGTGAAGCAGGCGCGCGACGTCAACATCGCCAG ACGCCGCGACGTGCTGACCGGCGCCAGCGAGTTTCCGAACTTGAACGAGGCTGATGTGAGCGTTGAGGCGGTCGCGCCGC TGCCCTCGCCGCCTCCGGTCAAAGCTGCGCTCAGCTTCGCGCCGCTCGCCCCGATCCGTCTTGCAGACGCGTTCGAGAAG TTGCGCGACCGCTCGGACGCCCTGCTGAAGAGCAAGGGCGGACGGCCGCACGTGTTCCTCGCCAATCTCGGCTCCGCCGC CGACTACACCGCGCGCGCGACCTTTGCCCGCAGCTTCTTCGAGGCCGGCGGCATCGCCGCGGTCGATGGCGAGGGCGGCT CCGACCCAGCCGCGCTCGCGGCGGCGTACCGCGCCTCGGGAGCGGCGATCGCCTGCCTCTGCTCATCCGACAAGGTCTAC GCCGATGCCGCGGTTCCCGCAGCCAAGGCCCTGCAAGCGGCCGGCGCGCGACATATCTATCTGGCAGGCCGCGGCGGCGA GCAGGAAGAAGCCTTGCGCGAGGCCGGGATCGGCAGCTTCGTATTCGCAGGCGGTGACGCGCTGGCAACGCTCGAAGACG CCTATACGCATCTGGAGTGA
Upstream 100 bases:
>100_bases GACATCTCCGGCGAAACAACCGTTTGGCTTGGCGGTCGCGACGTGGCATTTTGCGCCACAATAATCGCCATAACAGACGC TTCCGGGAGATACGGGCCGC
Downstream 100 bases:
>100_bases GCATGACCGAGGCCAGCAAACCCGTCCTCACCGGCGGCTGCCAATGCGGCACGATCCGCTATGCGCTGATGGCGGCGCCG ACGCGCGTGAGCATCTGCCA
Product: methylmalonyl-CoA mutase small subunit
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MTTDTEQLRLAADFAPASEADWRKLVDGVLKGAAFEKLVGKTYDGLKIQPIYSRAQGAAPVAGRAPAAAWQIMQRVDHRD AGKANAQALLDLENGATGLTLVFAGANAAHGFGLAATADALARALDGVHLDAAIAIELQATDASAAALLADYVKQRGFKP GACDIRFGLDPIGDAASSGASAHDAGALAGSAVDLVKQLHGAGFQGPFLAADGRVVHDAGGSEAQELAFVLASGVAYLRA LEAGGIALETARGLIFARLAADTDQFLTLAKFRSLRRLWARIEEACGLQPKPLVVSGETAWRMLTRRDPYVNMLRATIAT LAAGLGGANAITVLPHTAALGLPDAFARRVARNTQLVLLEESNLARVADPAAGAGGIEALTSELSTTAWALFQEIEKAGG IVAALQAGLIQSKVAAVKQARDVNIARRRDVLTGASEFPNLNEADVSVEAVAPLPSPPPVKAALSFAPLAPIRLADAFEK LRDRSDALLKSKGGRPHVFLANLGSAADYTARATFARSFFEAGGIAAVDGEGGSDPAALAAAYRASGAAIACLCSSDKVY ADAAVPAAKALQAAGARHIYLAGRGGEQEEALREAGIGSFVFAGGDALATLEDAYTHLE
Sequences:
>Translated_619_residues MTTDTEQLRLAADFAPASEADWRKLVDGVLKGAAFEKLVGKTYDGLKIQPIYSRAQGAAPVAGRAPAAAWQIMQRVDHRD AGKANAQALLDLENGATGLTLVFAGANAAHGFGLAATADALARALDGVHLDAAIAIELQATDASAAALLADYVKQRGFKP GACDIRFGLDPIGDAASSGASAHDAGALAGSAVDLVKQLHGAGFQGPFLAADGRVVHDAGGSEAQELAFVLASGVAYLRA LEAGGIALETARGLIFARLAADTDQFLTLAKFRSLRRLWARIEEACGLQPKPLVVSGETAWRMLTRRDPYVNMLRATIAT LAAGLGGANAITVLPHTAALGLPDAFARRVARNTQLVLLEESNLARVADPAAGAGGIEALTSELSTTAWALFQEIEKAGG IVAALQAGLIQSKVAAVKQARDVNIARRRDVLTGASEFPNLNEADVSVEAVAPLPSPPPVKAALSFAPLAPIRLADAFEK LRDRSDALLKSKGGRPHVFLANLGSAADYTARATFARSFFEAGGIAAVDGEGGSDPAALAAAYRASGAAIACLCSSDKVY ADAAVPAAKALQAAGARHIYLAGRGGEQEEALREAGIGSFVFAGGDALATLEDAYTHLE >Mature_618_residues TTDTEQLRLAADFAPASEADWRKLVDGVLKGAAFEKLVGKTYDGLKIQPIYSRAQGAAPVAGRAPAAAWQIMQRVDHRDA GKANAQALLDLENGATGLTLVFAGANAAHGFGLAATADALARALDGVHLDAAIAIELQATDASAAALLADYVKQRGFKPG ACDIRFGLDPIGDAASSGASAHDAGALAGSAVDLVKQLHGAGFQGPFLAADGRVVHDAGGSEAQELAFVLASGVAYLRAL EAGGIALETARGLIFARLAADTDQFLTLAKFRSLRRLWARIEEACGLQPKPLVVSGETAWRMLTRRDPYVNMLRATIATL AAGLGGANAITVLPHTAALGLPDAFARRVARNTQLVLLEESNLARVADPAAGAGGIEALTSELSTTAWALFQEIEKAGGI VAALQAGLIQSKVAAVKQARDVNIARRRDVLTGASEFPNLNEADVSVEAVAPLPSPPPVKAALSFAPLAPIRLADAFEKL RDRSDALLKSKGGRPHVFLANLGSAADYTARATFARSFFEAGGIAAVDGEGGSDPAALAAAYRASGAAIACLCSSDKVYA DAAVPAAKALQAAGARHIYLAGRGGEQEEALREAGIGSFVFAGGDALATLEDAYTHLE
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=486, Percent_Identity=26.1316872427983, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1789284, Length=468, Percent_Identity=26.2820512820513, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25144500, Length=249, Percent_Identity=32.9317269076305, Blast_Score=128, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 63689; Mature: 63557
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTEQLRLAADFAPASEADWRKLVDGVLKGAAFEKLVGKTYDGLKIQPIYSRAQGAAP CCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCC VAGRAPAAAWQIMQRVDHRDAGKANAQALLDLENGATGLTLVFAGANAAHGFGLAATADA CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHH LARALDGVHLDAAIAIELQATDASAAALLADYVKQRGFKPGACDIRFGLDPIGDAASSGA HHHHHCCCEECEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHCCCC SAHDAGALAGSAVDLVKQLHGAGFQGPFLAADGRVVHDAGGSEAQELAFVLASGVAYLRA CCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH LEAGGIALETARGLIFARLAADTDQFLTLAKFRSLRRLWARIEEACGLQPKPLVVSGETA HHCCCEEEEHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH WRMLTRRDPYVNMLRATIATLAAGLGGANAITVLPHTAALGLPDAFARRVARNTQLVLLE HHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCHHHHHHHHCCCEEEEEE ESNLARVADPAAGAGGIEALTSELSTTAWALFQEIEKAGGIVAALQAGLIQSKVAAVKQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RDVNIARRRDVLTGASEFPNLNEADVSVEAVAPLPSPPPVKAALSFAPLAPIRLADAFEK HCCCHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHH LRDRSDALLKSKGGRPHVFLANLGSAADYTARATFARSFFEAGGIAAVDGEGGSDPAALA HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH AAYRASGAAIACLCSSDKVYADAAVPAAKALQAAGARHIYLAGRGGEQEEALREAGIGSF HHHHCCCCEEEEEECCCCEEEHHHCCHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCE VFAGGDALATLEDAYTHLE EEECCCHHHHHHHHHHCCC >Mature Secondary Structure TTDTEQLRLAADFAPASEADWRKLVDGVLKGAAFEKLVGKTYDGLKIQPIYSRAQGAAP CCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCC VAGRAPAAAWQIMQRVDHRDAGKANAQALLDLENGATGLTLVFAGANAAHGFGLAATADA CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHH LARALDGVHLDAAIAIELQATDASAAALLADYVKQRGFKPGACDIRFGLDPIGDAASSGA HHHHHCCCEECEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHCCCC SAHDAGALAGSAVDLVKQLHGAGFQGPFLAADGRVVHDAGGSEAQELAFVLASGVAYLRA CCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH LEAGGIALETARGLIFARLAADTDQFLTLAKFRSLRRLWARIEEACGLQPKPLVVSGETA HHCCCEEEEHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH WRMLTRRDPYVNMLRATIATLAAGLGGANAITVLPHTAALGLPDAFARRVARNTQLVLLE HHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCHHHHHHHHCCCEEEEEE ESNLARVADPAAGAGGIEALTSELSTTAWALFQEIEKAGGIVAALQAGLIQSKVAAVKQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RDVNIARRRDVLTGASEFPNLNEADVSVEAVAPLPSPPPVKAALSFAPLAPIRLADAFEK HCCCHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHH LRDRSDALLKSKGGRPHVFLANLGSAADYTARATFARSFFEAGGIAAVDGEGGSDPAALA HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH AAYRASGAAIACLCSSDKVYADAAVPAAKALQAAGARHIYLAGRGGEQEEALREAGIGSF HHHHCCCCEEEEEECCCCEEEHHHCCHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCE VFAGGDALATLEDAYTHLE EEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]