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The map label for this gene is bepC [H]

Identifier: 146339668

GI number: 146339668

Start: 2864987

End: 2866414

Strand: Reverse

Name: bepC [H]

Synonym: BRADO2662

Alternate gene names: 146339668

Gene position: 2866414-2864987 (Counterclockwise)

Preceding gene: 146339669

Following gene: 146339667

Centisome position: 38.44

GC content: 69.96

Gene sequence:

>1428_bases
ATGGTGGGTCGAGCCAAAGAATTTGGCATCGGCAGGGTGCGCGCATGGCGGATCGGCTCCGGCCTGATCCTCGCCGCCAG
CCTTGTTGTCAGCCTTGCCGTCTGCGCGCCCGCGCGCGCCGAGGATCTCGCGGCCGCGCTCGCCAAGGCCTATCAGACCA
ACCCGGCGCTCAACGCCGAACGCGCGCGGCAGCGCGCCACGGACGAGAACGTGCCGCAGGCGCTGGCCGGATATCGCCCG
CAGCTGGTCGCGAGCCTGAGCAGCGGCCTGCAGGCCGTGCGCAATCTCCTGCCGGGCAACACCATCCAGACCGCGACCTT
GAAGCCTTGGACCATCGGCCTGACGGTGACGCAGACCTTGTTCAACGGCTTCCGCACCGCCAACAGCGTGCGCATGGCCG
AGCTGCAGGTGCAGTCCGGCCGCGAGGCGCTGCGCAATGTCGGCCAAGGCATCCTGCTCGACGCCGTCACCGCCTACACC
AACGTGCTCGCCAACCAGTCGCTGGTCGAGGCGCAGAAGTCGAACGTCGCCTTCCTGCGCGAGACGCTGGCGGTGACGCA
GCGCCGCCTCAATGCCGGCGACGTCACGCCGACAGACGCCTCGCAAGCGGAAGCCCGGCTGTCGCGCGGCCTCTCCGATC
TGAACGCGGCCGAGGTGAACCTCGCCATCAGCCAGGCCACCTATGCGCAGGTGATCGGCATGACGCCGGGCCAGCTGCGC
GCCGCCGATCCGATCGACCGGTTGCTGCCGCGCTCGCGGGAGGATGCCGTCGCGCTCGCCAACAAAGAGAATCCGGCGGT
TGCCGCCGCGAGCTTCGACGTCGACGCCGCCTCGACCTCGATCCACATCGCCGAGGGCGCGCTGCTGCCGAGCGTGACCT
TGCAAGGCAGCGTCAGCCGCAGCCGCGATTCGGACCAGACGCTCGGCACCTTCGGCACCGACCAGGCCTCGATCGTCGGC
GCCGTGACCGCGCCGATCTATGACGGCGGTACCGCGGCCTCGCAGACCCGGCAGGCCAAGGAGCTCGCCGCGCAAAGCCG
GCTGGTGCTCGATCAGGTTCGCAACCAGACGCGCACCGCCGTGGTCAGCGCCTGGGTCGCCAATGAGGGTGCCAAGGTCG
CCGTCAGCGCCTCCGAGGCCGAGGTGAAGGCCGCCACCGTCGCGCTGCAGGGCGTCTCGCGCGAGGCGCAGGGCGGCCAG
CGCACCACCGTCGACGTACTCAACTCGCAGGCCGATTTGATCCAGGCCAAGGCCCGCCTGATCGGCGCTCAGCGCGACCG
CGTCATCGCCTCCTACACGCTGCTCAGCGCGGTGGGCCGCCTCGACGTCAAGAACCTCAATTTGAACACGCCGGACTATC
TGCCCGAGGTCCACTATCACCAGGTCCGCGACGCCTGGCACGGCCTGCGCACGCCGTCGGGGCAGTAG

Upstream 100 bases:

>100_bases
GAAAAGCCTGCCGAATTCCGCACCAACGGTTTGTGTGTGGCAGTTCCCCGCCGTAAACAGGTAAACAATTGGTTAAGATA
GTGGGACGCGGCGGAGTCGG

Downstream 100 bases:

>100_bases
GGCGGCTTACGGGGCCGCGAGTCATCGGACCGACATGAGATGGGGCCGAGTCCCCTCGCTCTCCGCTGTCGTCCCGGGCA
AGCCTCCACGGCGCGTAAGC

Product: putative outer TolC membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MVGRAKEFGIGRVRAWRIGSGLILAASLVVSLAVCAPARAEDLAAALAKAYQTNPALNAERARQRATDENVPQALAGYRP
QLVASLSSGLQAVRNLLPGNTIQTATLKPWTIGLTVTQTLFNGFRTANSVRMAELQVQSGREALRNVGQGILLDAVTAYT
NVLANQSLVEAQKSNVAFLRETLAVTQRRLNAGDVTPTDASQAEARLSRGLSDLNAAEVNLAISQATYAQVIGMTPGQLR
AADPIDRLLPRSREDAVALANKENPAVAAASFDVDAASTSIHIAEGALLPSVTLQGSVSRSRDSDQTLGTFGTDQASIVG
AVTAPIYDGGTAASQTRQAKELAAQSRLVLDQVRNQTRTAVVSAWVANEGAKVAVSASEAEVKAATVALQGVSREAQGGQ
RTTVDVLNSQADLIQAKARLIGAQRDRVIASYTLLSAVGRLDVKNLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ

Sequences:

>Translated_475_residues
MVGRAKEFGIGRVRAWRIGSGLILAASLVVSLAVCAPARAEDLAAALAKAYQTNPALNAERARQRATDENVPQALAGYRP
QLVASLSSGLQAVRNLLPGNTIQTATLKPWTIGLTVTQTLFNGFRTANSVRMAELQVQSGREALRNVGQGILLDAVTAYT
NVLANQSLVEAQKSNVAFLRETLAVTQRRLNAGDVTPTDASQAEARLSRGLSDLNAAEVNLAISQATYAQVIGMTPGQLR
AADPIDRLLPRSREDAVALANKENPAVAAASFDVDAASTSIHIAEGALLPSVTLQGSVSRSRDSDQTLGTFGTDQASIVG
AVTAPIYDGGTAASQTRQAKELAAQSRLVLDQVRNQTRTAVVSAWVANEGAKVAVSASEAEVKAATVALQGVSREAQGGQ
RTTVDVLNSQADLIQAKARLIGAQRDRVIASYTLLSAVGRLDVKNLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ
>Mature_475_residues
MVGRAKEFGIGRVRAWRIGSGLILAASLVVSLAVCAPARAEDLAAALAKAYQTNPALNAERARQRATDENVPQALAGYRP
QLVASLSSGLQAVRNLLPGNTIQTATLKPWTIGLTVTQTLFNGFRTANSVRMAELQVQSGREALRNVGQGILLDAVTAYT
NVLANQSLVEAQKSNVAFLRETLAVTQRRLNAGDVTPTDASQAEARLSRGLSDLNAAEVNLAISQATYAQVIGMTPGQLR
AADPIDRLLPRSREDAVALANKENPAVAAASFDVDAASTSIHIAEGALLPSVTLQGSVSRSRDSDQTLGTFGTDQASIVG
AVTAPIYDGGTAASQTRQAKELAAQSRLVLDQVRNQTRTAVVSAWVANEGAKVAVSASEAEVKAATVALQGVSREAQGGQ
RTTVDVLNSQADLIQAKARLIGAQRDRVIASYTLLSAVGRLDVKNLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=442, Percent_Identity=26.2443438914027, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50118; Mature: 50118

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRAKEFGIGRVRAWRIGSGLILAASLVVSLAVCAPARAEDLAAALAKAYQTNPALNAE
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH
RARQRATDENVPQALAGYRPQLVASLSSGLQAVRNLLPGNTIQTATLKPWTIGLTVTQTL
HHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHH
FNGFRTANSVRMAELQVQSGREALRNVGQGILLDAVTAYTNVLANQSLVEAQKSNVAFLR
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCHHHHH
ETLAVTQRRLNAGDVTPTDASQAEARLSRGLSDLNAAEVNLAISQATYAQVIGMTPGQLR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHEEEEEHHHHHHHHHCCCCCCCC
AADPIDRLLPRSREDAVALANKENPAVAAASFDVDAASTSIHIAEGALLPSVTLQGSVSR
CCCCHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCC
SRDSDQTLGTFGTDQASIVGAVTAPIYDGGTAASQTRQAKELAAQSRLVLDQVRNQTRTA
CCCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSAWVANEGAKVAVSASEAEVKAATVALQGVSREAQGGQRTTVDVLNSQADLIQAKARL
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCHHHHHHHHHHH
IGAQRDRVIASYTLLSAVGRLDVKNLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ
HCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVGRAKEFGIGRVRAWRIGSGLILAASLVVSLAVCAPARAEDLAAALAKAYQTNPALNAE
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH
RARQRATDENVPQALAGYRPQLVASLSSGLQAVRNLLPGNTIQTATLKPWTIGLTVTQTL
HHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHH
FNGFRTANSVRMAELQVQSGREALRNVGQGILLDAVTAYTNVLANQSLVEAQKSNVAFLR
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCHHHHH
ETLAVTQRRLNAGDVTPTDASQAEARLSRGLSDLNAAEVNLAISQATYAQVIGMTPGQLR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHEEEEEHHHHHHHHHCCCCCCCC
AADPIDRLLPRSREDAVALANKENPAVAAASFDVDAASTSIHIAEGALLPSVTLQGSVSR
CCCCHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCC
SRDSDQTLGTFGTDQASIVGAVTAPIYDGGTAASQTRQAKELAAQSRLVLDQVRNQTRTA
CCCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSAWVANEGAKVAVSASEAEVKAATVALQGVSREAQGGQRTTVDVLNSQADLIQAKARL
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCHHHHHHHHHHH
IGAQRDRVIASYTLLSAVGRLDVKNLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ
HCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]