| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339667
Identifier: 146339667
GI number: 146339667
Start: 2863695
End: 2864654
Strand: Reverse
Name: 146339667
Synonym: BRADO2661
Alternate gene names: NA
Gene position: 2864654-2863695 (Counterclockwise)
Preceding gene: 146339668
Following gene: 146339665
Centisome position: 38.42
GC content: 65.62
Gene sequence:
>960_bases ATGCTCAACCGCCGAAGCCTGCTGCTGGCCTCGCTCGCCGCCGGAGTGACGATGACGACAGCCCGCGCAAACCCCTCACA ACCGGCTACGCCGGTCGATTTCGACGTGCCGGCCGACGCCTGCGACTGCCACACCCATATCCATGGCGACCCGGAGAAGT TTCCTTTCGCCGCCACTCGCGTCTATACGCCCGAGCCAGCCTCGCCGGAAGAAATGGCCGCCCTGCACAAAGCGCTGCAC ATCAAGCGCGTGGTGATCGTGACGCCGAGCGTCTACGGCACCGACAATTCAGCGACCTTGTTCGGGATGAAGGCACGCGG CAACGACGCCCGCGGCGTCGCTGTGATCGATGACAAGACCTCCGAGGCGCAGCTCGATGCGATGAACGCCGACGGCTTTC GCGGCATCCGCCTCAATCTCGCAACCGGCGGCATCAACGATCCCAATGTCGGCCGCGCCCGCTTCCAGGCCGCCGTCGAC CGCATGAAGGCGCGCGGCTGGCACGTTCAGCTCTACACCAACACGCCGATGATCGCGGCGATCAAGGACCTGGTGATGCA GTCGCAGGTCGCGGCCGTGTTCGATCATTTCGGCGGCGCGCAGGCCGAACTCGGCCTCGAGCAGCCCGGCTTCTCCGACC TCATCGACCTCGTCCGCAGCGGCAAGGCCTATGTGAAAATCTCCGGCGCCTACCGCGCCTCGACCAAGAGCCCCGACTAC ACCGACGTCATCCCGTTCGCGAAGGCTCTCATCGCCGCCAACCCCGACCGCATCGTCTGGGGCACCGACTGGCCGCACCC GGATTCGTCACCGCATCCTGAGCTGAAGGTGACGGATGTGAGGCCGTTCTATCAAATCGACGACGGCCGCCTGATGAACC AGCTCCCGGTGTGGGCGCCGGATGCCGCGATCCGCAAGAAGATCCTGGTCGACAACCCCGCGCGGCTGTACGGCTTCTGA
Upstream 100 bases:
>100_bases TGGCTTCGCTCTTGCCCCCTGCCCCGCGCCGGTTCACGCTCCTCCCGCAACACCAAGCGCGTCACCCGCAACGCACGCGC GACATCCGGGGAGACCCACC
Downstream 100 bases:
>100_bases GCCGAGACTGCAGCCTCAATCGCCGTCATTGCGAGGGGCGAAGCGACGAAGCAATCCAGTGTGGTGGGCGGGACTCTGGA ACGCTACCGCCACCGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLNRRSLLLASLAAGVTMTTARANPSQPATPVDFDVPADACDCHTHIHGDPEKFPFAATRVYTPEPASPEEMAALHKALH IKRVVIVTPSVYGTDNSATLFGMKARGNDARGVAVIDDKTSEAQLDAMNADGFRGIRLNLATGGINDPNVGRARFQAAVD RMKARGWHVQLYTNTPMIAAIKDLVMQSQVAAVFDHFGGAQAELGLEQPGFSDLIDLVRSGKAYVKISGAYRASTKSPDY TDVIPFAKALIAANPDRIVWGTDWPHPDSSPHPELKVTDVRPFYQIDDGRLMNQLPVWAPDAAIRKKILVDNPARLYGF
Sequences:
>Translated_319_residues MLNRRSLLLASLAAGVTMTTARANPSQPATPVDFDVPADACDCHTHIHGDPEKFPFAATRVYTPEPASPEEMAALHKALH IKRVVIVTPSVYGTDNSATLFGMKARGNDARGVAVIDDKTSEAQLDAMNADGFRGIRLNLATGGINDPNVGRARFQAAVD RMKARGWHVQLYTNTPMIAAIKDLVMQSQVAAVFDHFGGAQAELGLEQPGFSDLIDLVRSGKAYVKISGAYRASTKSPDY TDVIPFAKALIAANPDRIVWGTDWPHPDSSPHPELKVTDVRPFYQIDDGRLMNQLPVWAPDAAIRKKILVDNPARLYGF >Mature_319_residues MLNRRSLLLASLAAGVTMTTARANPSQPATPVDFDVPADACDCHTHIHGDPEKFPFAATRVYTPEPASPEEMAALHKALH IKRVVIVTPSVYGTDNSATLFGMKARGNDARGVAVIDDKTSEAQLDAMNADGFRGIRLNLATGGINDPNVGRARFQAAVD RMKARGWHVQLYTNTPMIAAIKDLVMQSQVAAVFDHFGGAQAELGLEQPGFSDLIDLVRSGKAYVKISGAYRASTKSPDY TDVIPFAKALIAANPDRIVWGTDWPHPDSSPHPELKVTDVRPFYQIDDGRLMNQLPVWAPDAAIRKKILVDNPARLYGF
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34669; Mature: 34669
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRSLLLASLAAGVTMTTARANPSQPATPVDFDVPADACDCHTHIHGDPEKFPFAATR CCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE VYTPEPASPEEMAALHKALHIKRVVIVTPSVYGTDNSATLFGMKARGNDARGVAVIDDKT EECCCCCCHHHHHHHHHHHHEEEEEEECCCEECCCCCEEEEEEEECCCCCCEEEEEECCC SEAQLDAMNADGFRGIRLNLATGGINDPNVGRARFQAAVDRMKARGWHVQLYTNTPMIAA CCCEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHH IKDLVMQSQVAAVFDHFGGAQAELGLEQPGFSDLIDLVRSGKAYVKISGAYRASTKSPDY HHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCEECCCCCCCC TDVIPFAKALIAANPDRIVWGTDWPHPDSSPHPELKVTDVRPFYQIDDGRLMNQLPVWAP HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCC DAAIRKKILVDNPARLYGF CHHHHHEEEECCCHHHCCC >Mature Secondary Structure MLNRRSLLLASLAAGVTMTTARANPSQPATPVDFDVPADACDCHTHIHGDPEKFPFAATR CCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE VYTPEPASPEEMAALHKALHIKRVVIVTPSVYGTDNSATLFGMKARGNDARGVAVIDDKT EECCCCCCHHHHHHHHHHHHEEEEEEECCCEECCCCCEEEEEEEECCCCCCEEEEEECCC SEAQLDAMNADGFRGIRLNLATGGINDPNVGRARFQAAVDRMKARGWHVQLYTNTPMIAA CCCEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHH IKDLVMQSQVAAVFDHFGGAQAELGLEQPGFSDLIDLVRSGKAYVKISGAYRASTKSPDY HHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCEECCCCCCCC TDVIPFAKALIAANPDRIVWGTDWPHPDSSPHPELKVTDVRPFYQIDDGRLMNQLPVWAP HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCC DAAIRKKILVDNPARLYGF CHHHHHEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA