| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339592
Identifier: 146339592
GI number: 146339592
Start: 2769224
End: 2770363
Strand: Reverse
Name: 146339592
Synonym: BRADO2584
Alternate gene names: NA
Gene position: 2770363-2769224 (Counterclockwise)
Preceding gene: 146339593
Following gene: 146339591
Centisome position: 37.15
GC content: 65.79
Gene sequence:
>1140_bases ATGCGCAGAAACCAGGTTGCCGTCGTCGGCGCGGCCGAGACCACCGAGCTCGGCGTCATCCCGAACATGTCGCAGATCCA GTTGCATGCGGACGCCGCGCTCAACGCCATCGCCGACGCCGGGCTGAAACTCAGCGACATCGACGGCTTCGCCACCGCGG TCGAGACGCCGCAGCAGATGTGTCATTACCTCGGCATCACGCCGACCTGGGTGGACGGCACCTCGGTCGGCGGCTGCTCC TTCATGCTGCATGTCCGCCACGCGGCGGCGGCGATCGAGGCCGGGCTGTGCAAGACCGTGCTGATCACCCATGCCGAAAG CGGCAAGTCGATGATCGGCAAGCTGCCGCGCTCGATTCCGGCCGACAGCCTGCAGGGCCAGTTCGAGGCGCCGTTCGGCG TCTACGGCCCGCCCAGCATGTTTCCGATTCCCGTGCTGCGCTACATGAAGACCTACGGCATCACCCATGAGCAGCTCGCG ATGGTGGCGGTGGTGCAGCGCGAATGGGCGGCGAAGAATCCGCGCGCGATGATGAAGGACACGATCACGGTCGAGGACGT GCTGAACTCGCGCATGATCGCCTATCCGTTCCGGCTGCTGCAATGCTGCCTGGTCACCGACGGCGGCGGCGCGCTGATCC TGACCTCGGCCGATCGCGCCAAGGATTTCCCGCAGAAGCCGGTGTACATTCTCGGCACCGGCGAGAGCGTGGAGACGCCG ATGGTCAGCCAGATGGAGACCTTCACCTCCTCGCGCGCCTTCAAGATCGCAGGTCCCCTCGCCTTCAAGGAAGCCGGCAT CACGCACGCCGACGTCGATCATCTGATGATCTACGACGCCTTCGCGCATCTGCCGCTGTTCGGCCTCGGCGATCTCGGCT TCATGCCGCATGAGGAGACCGGCCCGTTCATCGCCGCCGGCCACACGCGCCCCGGCGGCAAGCTGCCGCTGAACACCAAT GGCGGCGGCCTGTCCTACATGCATTCCGGCATGTACGGCATGTATGCGCTGCAGGAGAGCGTCCGCCAGATGCGCGGCAT CGCGCCGGCGCAGGTGCCGAATGCGAAAATCTCGGTGTGTCACGGCGTCGGCGGCATGTTCGCCGCGTCGGGCACGATCA TCTTCACCAACGAGAGATAG
Upstream 100 bases:
>100_bases CCGGAGTCGCTGGAGCTCGACATGCCGCTCGAAGTCACCTTCGAGCCGCTGGACGAGCAGATCACCCTGCCCCTGTTCCG ACCGGCGAAGGGCTGAGCCG
Downstream 100 bases:
>100_bases TGACATCCATCATCCTGGAGCCCTCTCCCTCGCTCCGTCCCTACTCCATGGCGATCGCATGTGATGGTGCAGATTTGAGT CGGGCTTTCTCGCGAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRRNQVAVVGAAETTELGVIPNMSQIQLHADAALNAIADAGLKLSDIDGFATAVETPQQMCHYLGITPTWVDGTSVGGCS FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPFGVYGPPSMFPIPVLRYMKTYGITHEQLA MVAVVQREWAAKNPRAMMKDTITVEDVLNSRMIAYPFRLLQCCLVTDGGGALILTSADRAKDFPQKPVYILGTGESVETP MVSQMETFTSSRAFKIAGPLAFKEAGITHADVDHLMIYDAFAHLPLFGLGDLGFMPHEETGPFIAAGHTRPGGKLPLNTN GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNER
Sequences:
>Translated_379_residues MRRNQVAVVGAAETTELGVIPNMSQIQLHADAALNAIADAGLKLSDIDGFATAVETPQQMCHYLGITPTWVDGTSVGGCS FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPFGVYGPPSMFPIPVLRYMKTYGITHEQLA MVAVVQREWAAKNPRAMMKDTITVEDVLNSRMIAYPFRLLQCCLVTDGGGALILTSADRAKDFPQKPVYILGTGESVETP MVSQMETFTSSRAFKIAGPLAFKEAGITHADVDHLMIYDAFAHLPLFGLGDLGFMPHEETGPFIAAGHTRPGGKLPLNTN GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNER >Mature_379_residues MRRNQVAVVGAAETTELGVIPNMSQIQLHADAALNAIADAGLKLSDIDGFATAVETPQQMCHYLGITPTWVDGTSVGGCS FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPFGVYGPPSMFPIPVLRYMKTYGITHEQLA MVAVVQREWAAKNPRAMMKDTITVEDVLNSRMIAYPFRLLQCCLVTDGGGALILTSADRAKDFPQKPVYILGTGESVETP MVSQMETFTSSRAFKIAGPLAFKEAGITHADVDHLMIYDAFAHLPLFGLGDLGFMPHEETGPFIAAGHTRPGGKLPLNTN GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNER
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=386, Percent_Identity=25.3886010362694, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI302344767, Length=258, Percent_Identity=26.7441860465116, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI302344760, Length=258, Percent_Identity=26.7441860465116, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI302344762, Length=258, Percent_Identity=26.7441860465116, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI55956775, Length=220, Percent_Identity=25, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17537653, Length=383, Percent_Identity=23.4986945169713, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI19921506, Length=360, Percent_Identity=27.5, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24585051, Length=394, Percent_Identity=27.9187817258883, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40542; Mature: 40542
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNQVAVVGAAETTELGVIPNMSQIQLHADAALNAIADAGLKLSDIDGFATAVETPQQM CCCCEEEEEECCCCCEECCCCCCHHEEEEHHHHHHHHHHCCCEEECCCCHHHHHCCHHHH CHYLGITPTWVDGTSVGGCSFMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIP HHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCC ADSLQGQFEAPFGVYGPPSMFPIPVLRYMKTYGITHEQLAMVAVVQREWAAKNPRAMMKD CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHC TITVEDVLNSRMIAYPFRLLQCCLVTDGGGALILTSADRAKDFPQKPVYILGTGESVETP CEEHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEEECHHCCCCCCCCEEEEECCCCCCCC MVSQMETFTSSRAFKIAGPLAFKEAGITHADVDHLMIYDAFAHLPLFGLGDLGFMPHEET HHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCC GPFIAAGHTRPGGKLPLNTNGGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVC CCEEEECCCCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE HGVGGMFAASGTIIFTNER ECCCCCEECCCEEEEECCC >Mature Secondary Structure MRRNQVAVVGAAETTELGVIPNMSQIQLHADAALNAIADAGLKLSDIDGFATAVETPQQM CCCCEEEEEECCCCCEECCCCCCHHEEEEHHHHHHHHHHCCCEEECCCCHHHHHCCHHHH CHYLGITPTWVDGTSVGGCSFMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIP HHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCC ADSLQGQFEAPFGVYGPPSMFPIPVLRYMKTYGITHEQLAMVAVVQREWAAKNPRAMMKD CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHC TITVEDVLNSRMIAYPFRLLQCCLVTDGGGALILTSADRAKDFPQKPVYILGTGESVETP CEEHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEEECHHCCCCCCCCEEEEECCCCCCCC MVSQMETFTSSRAFKIAGPLAFKEAGITHADVDHLMIYDAFAHLPLFGLGDLGFMPHEET HHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCC GPFIAAGHTRPGGKLPLNTNGGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVC CCEEEECCCCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE HGVGGMFAASGTIIFTNER ECCCCCEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]