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The map label for this gene is rutD [H]

Identifier: 146339525

GI number: 146339525

Start: 2689472

End: 2690392

Strand: Reverse

Name: rutD [H]

Synonym: BRADO2515

Alternate gene names: 146339525

Gene position: 2690392-2689472 (Counterclockwise)

Preceding gene: 146339534

Following gene: 146339522

Centisome position: 36.08

GC content: 67.32

Gene sequence:

>921_bases
ATGACTGCCATTGCCCACCAGCCGCCGCAGACCGTTCGCGCCAACGGGATCGACATCTGCTACGAGATCTTCGGTGATCC
CTCGGCGCCCCCGCTGCTGCTGATCATGGGCCTGGGCGGGCAGATGATCATCTGGGACGACGCGTTCTGCGAGCAGCTCG
CCGCCTGCGGCTTTCGCGTCATCCGCTTCGACAACCGCGACATCGGCCAGTCGAGCCATCTGCATGGCGGGCGGCGGATC
ACACCGTTCGAGCTGCTCAAGCTGCGCTTCTTCAACATCCCGGTCTCGGCGCCCTACAAGATCCTCGACATGGCCAAGGA
CACGGTCGGCCTGATGGACGCCCTCGACATCAAGTCGGCGCATCTGGTCGGTGCCTCGATGGGCGGCATGATCGCCCAGG
AGGTCGCGATCTCGTTCCCGCATCGCGTGCGCTCGCTGACCTCGATCATGTCGACAACAGGCAATCCGCGGATTCCGCCG
CCGACCCGCGAGGTTGCGATGCTGCTGATGGCGCCGCCGCCCCGGACCAGGGACGAGTACATCAAGCGCTTCCAGAAGAC
CTGGAAGGCGCTGCGCGCCGGCTCCTTCCCCGAGGACGAGGCGCGCGACGTGGCGCTGGCCGAGCGCTGTTTCGCCCGTG
GCCTCAACCCGGCGGGTGTCGGCCGTCAGTTGCGGGCAATCCTGGCCTCCGGCAGCCGCAAGCCGCGGCTGCACCAGGTG
ACGGCACCGACGCTCGTCATCCACGGCAAGCTCGACCCGCTGGTGCATCACTCGGCCGGCACCGACACGGCGGAGTCGAT
CCCCAACGCCAAGCTCTTGATGATCGAGCGCATGGGCCACGCCATCCCGATTCCGACCTGGCCGCAGATCATCTCCGCCA
TCGCCGACCACGCTCATGGCGCGAATGCGCAGGCGGCGTAG

Upstream 100 bases:

>100_bases
CACGCCCTTGCTGCGATGCGGGAGGATCATCCGAGCCCGCTTCTCTGCAGCGGCGGGACCATGCCATAGAGGGCAGGTTG
GCCTTGAACGAGGGATCACC

Downstream 100 bases:

>100_bases
CGATCCGTCTGACGTAGGCCCAGCCGCTCGCCATACCCTCAGCTGGTCGTCCCGGCGAACGCCGGGACCCATACCCACCG
ACCTTCGTGGTTGCGACGCG

Product: hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTAIAHQPPQTVRANGIDICYEIFGDPSAPPLLLIMGLGGQMIIWDDAFCEQLAACGFRVIRFDNRDIGQSSHLHGGRRI
TPFELLKLRFFNIPVSAPYKILDMAKDTVGLMDALDIKSAHLVGASMGGMIAQEVAISFPHRVRSLTSIMSTTGNPRIPP
PTREVAMLLMAPPPRTRDEYIKRFQKTWKALRAGSFPEDEARDVALAERCFARGLNPAGVGRQLRAILASGSRKPRLHQV
TAPTLVIHGKLDPLVHHSAGTDTAESIPNAKLLMIERMGHAIPIPTWPQIISAIADHAHGANAQAA

Sequences:

>Translated_306_residues
MTAIAHQPPQTVRANGIDICYEIFGDPSAPPLLLIMGLGGQMIIWDDAFCEQLAACGFRVIRFDNRDIGQSSHLHGGRRI
TPFELLKLRFFNIPVSAPYKILDMAKDTVGLMDALDIKSAHLVGASMGGMIAQEVAISFPHRVRSLTSIMSTTGNPRIPP
PTREVAMLLMAPPPRTRDEYIKRFQKTWKALRAGSFPEDEARDVALAERCFARGLNPAGVGRQLRAILASGSRKPRLHQV
TAPTLVIHGKLDPLVHHSAGTDTAESIPNAKLLMIERMGHAIPIPTWPQIISAIADHAHGANAQAA
>Mature_305_residues
TAIAHQPPQTVRANGIDICYEIFGDPSAPPLLLIMGLGGQMIIWDDAFCEQLAACGFRVIRFDNRDIGQSSHLHGGRRIT
PFELLKLRFFNIPVSAPYKILDMAKDTVGLMDALDIKSAHLVGASMGGMIAQEVAISFPHRVRSLTSIMSTTGNPRIPPP
TREVAMLLMAPPPRTRDEYIKRFQKTWKALRAGSFPEDEARDVALAERCFARGLNPAGVGRQLRAILASGSRKPRLHQVT
APTLVIHGKLDPLVHHSAGTDTAESIPNAKLLMIERMGHAIPIPTWPQIISAIADHAHGANAQAA

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33341; Mature: 33210

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIAHQPPQTVRANGIDICYEIFGDPSAPPLLLIMGLGGQMIIWDDAFCEQLAACGFRV
CCCCCCCCCHHHHCCCCEEEHEECCCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCEEE
IRFDNRDIGQSSHLHGGRRITPFELLKLRFFNIPVSAPYKILDMAKDTVGLMDALDIKSA
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
HLVGASMGGMIAQEVAISFPHRVRSLTSIMSTTGNPRIPPPTREVAMLLMAPPPRTRDEY
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCCHHHH
IKRFQKTWKALRAGSFPEDEARDVALAERCFARGLNPAGVGRQLRAILASGSRKPRLHQV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE
TAPTLVIHGKLDPLVHHSAGTDTAESIPNAKLLMIERMGHAIPIPTWPQIISAIADHAHG
CCCEEEEECCCCHHHCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
ANAQAA
CCCCCC
>Mature Secondary Structure 
TAIAHQPPQTVRANGIDICYEIFGDPSAPPLLLIMGLGGQMIIWDDAFCEQLAACGFRV
CCCCCCCCHHHHCCCCEEEHEECCCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCEEE
IRFDNRDIGQSSHLHGGRRITPFELLKLRFFNIPVSAPYKILDMAKDTVGLMDALDIKSA
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
HLVGASMGGMIAQEVAISFPHRVRSLTSIMSTTGNPRIPPPTREVAMLLMAPPPRTRDEY
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCCHHHH
IKRFQKTWKALRAGSFPEDEARDVALAERCFARGLNPAGVGRQLRAILASGSRKPRLHQV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE
TAPTLVIHGKLDPLVHHSAGTDTAESIPNAKLLMIERMGHAIPIPTWPQIISAIADHAHG
CCCEEEEECCCCHHHCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
ANAQAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA