| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ywrD [H]
Identifier: 146339517
GI number: 146339517
Start: 2679628
End: 2681430
Strand: Reverse
Name: ywrD [H]
Synonym: BRADO2507
Alternate gene names: 146339517
Gene position: 2681430-2679628 (Counterclockwise)
Preceding gene: 146339518
Following gene: 146339516
Centisome position: 35.96
GC content: 69.44
Gene sequence:
>1803_bases ATGAGCTTCATCAATCCCGATCCCTTCACCACCCGCCCCGAGATCGACGGCACCTTCGGCGTCGTCACCTCGACGCACTG GCTCGCGACCGCCGTCGGCATGGCCATGCTGGAACGCGGCGGCAATGCGTTCGATGCCGGCGTCGCGGCCGCCTTCACCC TGCAGGTGGTCGAGCCGCATCTCAACGGCCCCGGCGGCGACGTGCCGATCATCCTGCACGACGTCAAGCGCGGACGCACC GAGGTGATCTGCGGCCAGGGCCCCGCTCCAGCCGGCGCCACCATCGCGCACTACAAGCGCGAGGGCCTGGACATGGTGCC CGGCACCGGCCTTCTGGCCGCCTGCGTCCCCGGCACCTTCGAGTCGTGGATGCTGCTGTTGCGCGACTACGGCACGATGC GGCTGCGCGATGTGCTGGAGCCGGCGATCTCCTACGCCCGCGACGGCTATCCGCTGGTCGAGCGTGTCTCGGCGACCATC CAGACCGTCGAGCAGCTGTTCAAGACGCATTGGCCGACCTCGGCCGCGCTCTATCTGACGAACGGCGCCGTGCCGAAACC TGGCGCGCTGTTCACCAATCCCAAGCTCGCCGAGACCTACGCGCGGATCCTAAGCGAGGCCGAGAGCGCCGGGGGGAATC GCGACGCGCAGATCGAGCGCGCCCGCAAGGCGTGGTCGCAGGGCTTCGTTGCCGAGGCGATCGACCGTTTCTGCCGGACG CAGGAGGTGATGGACGTCTCGGGTTCGCGCCACAAGGGCGTGCTCACGGCCGACGACATGGCGCGCTGGCAGCCGACCAT CGAGGCGCCGCTGACCTATCAGTATGGCCGCTACACCGTGTGCAAGGCCGGCGTCTGGAGCCAGGGCCCGGTGCTGCTGC AACAGCTCGCGCTGCTCAAGGGCTTTGCGCTCGACGGCCTTGATCCGACCGGCCCCGATTTTATCCATTGGCAGATCGAA GCCGCCAAGCTGGCGTTCGCCGATCGCGAGGCGTTCTACGGCGATCCGAACTTTGCTGACATCCCGATCGAGACCCTGCT GTCTGACGCCTATAACGACCAGCGGCGCAAGCTGATCACCGAGAAGGCCTCGCTGGAGCTGCGGCCCGGCAGGCTCGACG GCTACGGCGCCGAGGTGAAGCTGCGCGAGGCGGCAGGTCACCGCGAGGCCGTCGGCGCGATGGGCTCGGGCGAGCCGACC GTCGGCCGCTTCGGCGAGGTGCGCGGCGACACCGTGCATTTCGACATCATCGATTCCCAAGGCAACATGATCTCGGCGAC GCCCTCCGGCGGCTGGCTGCAGTCCTCGCCCGTCATTCCCGAGCTCGGCTTCTGCCTCGGCACCCGCGCGCAGATGTTCT GGCTCGAAGAGAATCATCCGGCAGCACTCGTGCCGGGCAAGCGGCCGCGCACGACCTTGTCGCCGACCATGGCGCTGCGC GACGGCGAGCCCTACGTCGCCTGGGGCTCGCCCGGCGGCGACCAGCAGGACCAGTGGAACACGCAGTTCTTCCTGCGCCA CGTCCATGCCGGCATGAACCTGCAGGAATCGATCGACGCGCCCGCTTGGCACTCCGAGCACTTTCCGATCTCGTTCTGGC CGCGCACCGCGCGTCCCGGCGTGCTCGTCGTCGAGGGCCGTGTGCCGAAGACGACCGTCGAGGAGCTGCGCCGCCGCGGC CATGTCGTCGAGATCGGCCCCGACTGGTCGGAGGGGCGCCTCACGGCCGCCTCGCGCGTCGGCCGCCGCCGCCGCGCCGC CGCCAATCCGCGGGGCATGCAGGGCTACGCCGCGGGCCGATAA
Upstream 100 bases:
>100_bases GCGAAGCGACGAAGCAATCCAGGGGCGGCATCCTGGGCCCCGGGATTGCTTCGCTATCGCTCGCAATGACGACGACTAGC TACACAGATCAAAGGGCGCC
Downstream 100 bases:
>100_bases GAGAGCCACACGCCGATGACCTGGTCGATCATAGCGAAGGACGATACAACCGGCCGGATCGGCATCGCCGTTGCCACGCG CTTCTTCGCCGTCGGCGCGC
Product: putative gamma-glutamyltranspeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSFINPDPFTTRPEIDGTFGVVTSTHWLATAVGMAMLERGGNAFDAGVAAAFTLQVVEPHLNGPGGDVPIILHDVKRGRT EVICGQGPAPAGATIAHYKREGLDMVPGTGLLAACVPGTFESWMLLLRDYGTMRLRDVLEPAISYARDGYPLVERVSATI QTVEQLFKTHWPTSAALYLTNGAVPKPGALFTNPKLAETYARILSEAESAGGNRDAQIERARKAWSQGFVAEAIDRFCRT QEVMDVSGSRHKGVLTADDMARWQPTIEAPLTYQYGRYTVCKAGVWSQGPVLLQQLALLKGFALDGLDPTGPDFIHWQIE AAKLAFADREAFYGDPNFADIPIETLLSDAYNDQRRKLITEKASLELRPGRLDGYGAEVKLREAAGHREAVGAMGSGEPT VGRFGEVRGDTVHFDIIDSQGNMISATPSGGWLQSSPVIPELGFCLGTRAQMFWLEENHPAALVPGKRPRTTLSPTMALR DGEPYVAWGSPGGDQQDQWNTQFFLRHVHAGMNLQESIDAPAWHSEHFPISFWPRTARPGVLVVEGRVPKTTVEELRRRG HVVEIGPDWSEGRLTAASRVGRRRRAAANPRGMQGYAAGR
Sequences:
>Translated_600_residues MSFINPDPFTTRPEIDGTFGVVTSTHWLATAVGMAMLERGGNAFDAGVAAAFTLQVVEPHLNGPGGDVPIILHDVKRGRT EVICGQGPAPAGATIAHYKREGLDMVPGTGLLAACVPGTFESWMLLLRDYGTMRLRDVLEPAISYARDGYPLVERVSATI QTVEQLFKTHWPTSAALYLTNGAVPKPGALFTNPKLAETYARILSEAESAGGNRDAQIERARKAWSQGFVAEAIDRFCRT QEVMDVSGSRHKGVLTADDMARWQPTIEAPLTYQYGRYTVCKAGVWSQGPVLLQQLALLKGFALDGLDPTGPDFIHWQIE AAKLAFADREAFYGDPNFADIPIETLLSDAYNDQRRKLITEKASLELRPGRLDGYGAEVKLREAAGHREAVGAMGSGEPT VGRFGEVRGDTVHFDIIDSQGNMISATPSGGWLQSSPVIPELGFCLGTRAQMFWLEENHPAALVPGKRPRTTLSPTMALR DGEPYVAWGSPGGDQQDQWNTQFFLRHVHAGMNLQESIDAPAWHSEHFPISFWPRTARPGVLVVEGRVPKTTVEELRRRG HVVEIGPDWSEGRLTAASRVGRRRRAAANPRGMQGYAAGR >Mature_599_residues SFINPDPFTTRPEIDGTFGVVTSTHWLATAVGMAMLERGGNAFDAGVAAAFTLQVVEPHLNGPGGDVPIILHDVKRGRTE VICGQGPAPAGATIAHYKREGLDMVPGTGLLAACVPGTFESWMLLLRDYGTMRLRDVLEPAISYARDGYPLVERVSATIQ TVEQLFKTHWPTSAALYLTNGAVPKPGALFTNPKLAETYARILSEAESAGGNRDAQIERARKAWSQGFVAEAIDRFCRTQ EVMDVSGSRHKGVLTADDMARWQPTIEAPLTYQYGRYTVCKAGVWSQGPVLLQQLALLKGFALDGLDPTGPDFIHWQIEA AKLAFADREAFYGDPNFADIPIETLLSDAYNDQRRKLITEKASLELRPGRLDGYGAEVKLREAAGHREAVGAMGSGEPTV GRFGEVRGDTVHFDIIDSQGNMISATPSGGWLQSSPVIPELGFCLGTRAQMFWLEENHPAALVPGKRPRTTLSPTMALRD GEPYVAWGSPGGDQQDQWNTQFFLRHVHAGMNLQESIDAPAWHSEHFPISFWPRTARPGVLVVEGRVPKTTVEELRRRGH VVEIGPDWSEGRLTAASRVGRRRRAAANPRGMQGYAAGR
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=561, Percent_Identity=21.74688057041, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915090, Length=561, Percent_Identity=21.74688057041, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915096, Length=561, Percent_Identity=21.74688057041, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915094, Length=561, Percent_Identity=21.74688057041, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI113429324, Length=556, Percent_Identity=21.7625899280576, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI113429326, Length=561, Percent_Identity=21.5686274509804, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI109148539, Length=560, Percent_Identity=25.3571428571429, Blast_Score=88, Evalue=3e-17, Organism=Escherichia coli, GI1789856, Length=588, Percent_Identity=26.0204081632653, Blast_Score=170, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193208245, Length=542, Percent_Identity=24.9077490774908, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI193208247, Length=595, Percent_Identity=25.0420168067227, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI212646519, Length=540, Percent_Identity=23.3333333333333, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI72000294, Length=540, Percent_Identity=23.3333333333333, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI18859893, Length=567, Percent_Identity=23.1040564373898, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI161077496, Length=577, Percent_Identity=22.3570190641248, Blast_Score=90, Evalue=6e-18, Organism=Drosophila melanogaster, GI24642670, Length=594, Percent_Identity=21.2121212121212, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24642666, Length=594, Percent_Identity=21.2121212121212, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45551474, Length=594, Percent_Identity=21.2121212121212, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI161077880, Length=594, Percent_Identity=21.2121212121212, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI161077878, Length=594, Percent_Identity=21.2121212121212, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 65531; Mature: 65400
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFINPDPFTTRPEIDGTFGVVTSTHWLATAVGMAMLERGGNAFDAGVAAAFTLQVVEPH CCCCCCCCCCCCCCCCCCEEEHCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCC LNGPGGDVPIILHDVKRGRTEVICGQGPAPAGATIAHYKREGLDMVPGTGLLAACVPGTF CCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCH ESWMLLLRDYGTMRLRDVLEPAISYARDGYPLVERVSATIQTVEQLFKTHWPTSAALYLT HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE NGAVPKPGALFTNPKLAETYARILSEAESAGGNRDAQIERARKAWSQGFVAEAIDRFCRT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH QEVMDVSGSRHKGVLTADDMARWQPTIEAPLTYQYGRYTVCKAGVWSQGPVLLQQLALLK HHHHHCCCCCCCCCEEHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH GFALDGLDPTGPDFIHWQIEAAKLAFADREAFYGDPNFADIPIETLLSDAYNDQRRKLIT CCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH EKASLELRPGRLDGYGAEVKLREAAGHREAVGAMGSGEPTVGRFGEVRGDTVHFDIIDSQ HHCCCEECCCCCCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECC GNMISATPSGGWLQSSPVIPELGFCLGTRAQMFWLEENHPAALVPGKRPRTTLSPTMALR CCEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEE DGEPYVAWGSPGGDQQDQWNTQFFLRHVHAGMNLQESIDAPAWHSEHFPISFWPRTARPG CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEECCCCCCCC VLVVEGRVPKTTVEELRRRGHVVEIGPDWSEGRLTAASRVGRRRRAAANPRGMQGYAAGR EEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SFINPDPFTTRPEIDGTFGVVTSTHWLATAVGMAMLERGGNAFDAGVAAAFTLQVVEPH CCCCCCCCCCCCCCCCCEEEHCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCC LNGPGGDVPIILHDVKRGRTEVICGQGPAPAGATIAHYKREGLDMVPGTGLLAACVPGTF CCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCH ESWMLLLRDYGTMRLRDVLEPAISYARDGYPLVERVSATIQTVEQLFKTHWPTSAALYLT HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE NGAVPKPGALFTNPKLAETYARILSEAESAGGNRDAQIERARKAWSQGFVAEAIDRFCRT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH QEVMDVSGSRHKGVLTADDMARWQPTIEAPLTYQYGRYTVCKAGVWSQGPVLLQQLALLK HHHHHCCCCCCCCCEEHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH GFALDGLDPTGPDFIHWQIEAAKLAFADREAFYGDPNFADIPIETLLSDAYNDQRRKLIT CCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH EKASLELRPGRLDGYGAEVKLREAAGHREAVGAMGSGEPTVGRFGEVRGDTVHFDIIDSQ HHCCCEECCCCCCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECC GNMISATPSGGWLQSSPVIPELGFCLGTRAQMFWLEENHPAALVPGKRPRTTLSPTMALR CCEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEE DGEPYVAWGSPGGDQQDQWNTQFFLRHVHAGMNLQESIDAPAWHSEHFPISFWPRTARPG CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEECCCCCCCC VLVVEGRVPKTTVEELRRRGHVVEIGPDWSEGRLTAASRVGRRRRAAANPRGMQGYAAGR EEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]