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The map label for this gene is ynfM [H]

Identifier: 146339460

GI number: 146339460

Start: 2606492

End: 2607793

Strand: Reverse

Name: ynfM [H]

Synonym: BRADO2446

Alternate gene names: 146339460

Gene position: 2607793-2606492 (Counterclockwise)

Preceding gene: 146339461

Following gene: 146339449

Centisome position: 34.97

GC content: 69.05

Gene sequence:

>1302_bases
GTGATGATCGGCTCGGCGTGGAAGGGCGGTCCGCCGTTCCGGCCTTCCGCGCACGAGCCGAGAGGACGGGTGATGACGGA
CATCTCCGCACGAACGCCGGCGCAAGCCGATCACGCTCATGTTCCGGCCACGGTCCGCCGCGCCGTCGTGATCGGCCTGA
TCGCATTCTTCAGTCTCGTCGATCTGTTTGCCGCGCAGGCCATGCTACCCGCGCTGATTCAGCACTACCAGGTCAGCCCG
GCCGCGATGGGTCTTGCGGTGAACGCCTGCACCCTGGGCATGGCGATCTCCAGCCTGGCGACCGGCCTGCTCAGCCCGCT
GATCGATCGCCGCATCGGGATCGTCTGCAGCCTGGCGCTGCTCTCGGTCTTCACAGCGCTGCTCGCGAGCGCGCCAAACC
TTGCGGTGTTCGCAGGTCTGCGCATCCTGCAGGGCCTGTGCATGGCGTCGGCGTTCGCGCTCACTCTGGCGCATCTCGGC
GAGCAGTGCAGCATGAGCGAGGCCGGCGGCGCGTTCGCGGCCTATATCGCCGGCAATGTCGCGAGCAACCTCGTCGGGCG
CCTGCTCTCAGCCAGTCTGACCGGCGAGCTCGGCCTCGCGCCCACCTTCTACGTCTTCGCCGCGCTCAATCTCGGCGGCG
CCTTGCTGGTCGGCGGCACGCTCGGACGCGGCGGCATGATGGCAGGTGTCGCGAGCGCGCTGCGGAGCGCGGCCATCCTC
GACCACCTCGGCAACAGCCGCCTGCGCGCGGCATTCGGCCTCGGCTTCTGCATCCTGTTCGCCTTCATCGGTGCGTTCAC
CTTCGTGAACTTCGTGCTGGTGCGGCCGCCGCTCTCGCTCGGCATGATGCACCTGGGGCTCGTCTATGTCGTGTTCTTGC
CGTCGATCCTCACCACCCTGCTCGCAGGACGGATCGCCGCGCGGACAGGCATCCGGCCTGCGATCTGGGGATCGCTGGGG
CTCGCGGGACTAGGGCTGTTGCTGATGCTGTCGCCACGGCTCGCGCTGGTGCTGAGCGGCATGGTGCTGGTCGGCGCCGG
CACCTTCTTCGCGCAGGCCGTGACCACCGGCTTTGTGGGCAAGGCCGCCACGCACGATCAGGGTGTCGCCAGCGGTCTCT
ATCTCGCCAGCTATTTTGCCGGCGGCATCGTCGGCACGGCCGTGCTCGGCCAGTTGTTCGACAGGGTCGGCTGGAGCGCC
TGCGTCGCCGGCATCGCGGCGGTGCTGGTCGTCGCGGCGCTGTTGGCGGGCCGGCTGACGACGTCAGATGCTCAAGGCCG
GCTCGGCGCGGCGTCCGGCTGA

Upstream 100 bases:

>100_bases
CGGCACCTCGCATTGGTGGAAGAACGACGGCAAGGAGACGGTCATCCTCTATGTCGGCGACGTCCGCAAGGATCCGAACG
ACCACAACATGTAACGCAAC

Downstream 100 bases:

>100_bases
GCCGGCGGCGCCGGCTCGTCGTCATCAGCGATAGCGCGCCAGGCGGCGCCTTCGAGATCCTCGTACTGGCCGCTCTTCAG
CGACCAGAGGAAGCCGACCA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MMIGSAWKGGPPFRPSAHEPRGRVMTDISARTPAQADHAHVPATVRRAVVIGLIAFFSLVDLFAAQAMLPALIQHYQVSP
AAMGLAVNACTLGMAISSLATGLLSPLIDRRIGIVCSLALLSVFTALLASAPNLAVFAGLRILQGLCMASAFALTLAHLG
EQCSMSEAGGAFAAYIAGNVASNLVGRLLSASLTGELGLAPTFYVFAALNLGGALLVGGTLGRGGMMAGVASALRSAAIL
DHLGNSRLRAAFGLGFCILFAFIGAFTFVNFVLVRPPLSLGMMHLGLVYVVFLPSILTTLLAGRIAARTGIRPAIWGSLG
LAGLGLLLMLSPRLALVLSGMVLVGAGTFFAQAVTTGFVGKAATHDQGVASGLYLASYFAGGIVGTAVLGQLFDRVGWSA
CVAGIAAVLVVAALLAGRLTTSDAQGRLGAASG

Sequences:

>Translated_433_residues
MMIGSAWKGGPPFRPSAHEPRGRVMTDISARTPAQADHAHVPATVRRAVVIGLIAFFSLVDLFAAQAMLPALIQHYQVSP
AAMGLAVNACTLGMAISSLATGLLSPLIDRRIGIVCSLALLSVFTALLASAPNLAVFAGLRILQGLCMASAFALTLAHLG
EQCSMSEAGGAFAAYIAGNVASNLVGRLLSASLTGELGLAPTFYVFAALNLGGALLVGGTLGRGGMMAGVASALRSAAIL
DHLGNSRLRAAFGLGFCILFAFIGAFTFVNFVLVRPPLSLGMMHLGLVYVVFLPSILTTLLAGRIAARTGIRPAIWGSLG
LAGLGLLLMLSPRLALVLSGMVLVGAGTFFAQAVTTGFVGKAATHDQGVASGLYLASYFAGGIVGTAVLGQLFDRVGWSA
CVAGIAAVLVVAALLAGRLTTSDAQGRLGAASG
>Mature_433_residues
MMIGSAWKGGPPFRPSAHEPRGRVMTDISARTPAQADHAHVPATVRRAVVIGLIAFFSLVDLFAAQAMLPALIQHYQVSP
AAMGLAVNACTLGMAISSLATGLLSPLIDRRIGIVCSLALLSVFTALLASAPNLAVFAGLRILQGLCMASAFALTLAHLG
EQCSMSEAGGAFAAYIAGNVASNLVGRLLSASLTGELGLAPTFYVFAALNLGGALLVGGTLGRGGMMAGVASALRSAAIL
DHLGNSRLRAAFGLGFCILFAFIGAFTFVNFVLVRPPLSLGMMHLGLVYVVFLPSILTTLLAGRIAARTGIRPAIWGSLG
LAGLGLLLMLSPRLALVLSGMVLVGAGTFFAQAVTTGFVGKAATHDQGVASGLYLASYFAGGIVGTAVLGQLFDRVGWSA
CVAGIAAVLVVAALLAGRLTTSDAQGRLGAASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=395, Percent_Identity=27.3417721518987, Blast_Score=118, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43932; Mature: 43932

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIGSAWKGGPPFRPSAHEPRGRVMTDISARTPAQADHAHVPATVRRAVVIGLIAFFSLV
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DLFAAQAMLPALIQHYQVSPAAMGLAVNACTLGMAISSLATGLLSPLIDRRIGIVCSLAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVFTALLASAPNLAVFAGLRILQGLCMASAFALTLAHLGEQCSMSEAGGAFAAYIAGNV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHH
ASNLVGRLLSASLTGELGLAPTFYVFAALNLGGALLVGGTLGRGGMMAGVASALRSAAIL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
DHLGNSRLRAAFGLGFCILFAFIGAFTFVNFVLVRPPLSLGMMHLGLVYVVFLPSILTTL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAGRIAARTGIRPAIWGSLGLAGLGLLLMLSPRLALVLSGMVLVGAGTFFAQAVTTGFVG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KAATHDQGVASGLYLASYFAGGIVGTAVLGQLFDRVGWSACVAGIAAVLVVAALLAGRLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
TSDAQGRLGAASG
CCCCCCCCCCCCC
>Mature Secondary Structure
MMIGSAWKGGPPFRPSAHEPRGRVMTDISARTPAQADHAHVPATVRRAVVIGLIAFFSLV
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DLFAAQAMLPALIQHYQVSPAAMGLAVNACTLGMAISSLATGLLSPLIDRRIGIVCSLAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVFTALLASAPNLAVFAGLRILQGLCMASAFALTLAHLGEQCSMSEAGGAFAAYIAGNV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHH
ASNLVGRLLSASLTGELGLAPTFYVFAALNLGGALLVGGTLGRGGMMAGVASALRSAAIL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
DHLGNSRLRAAFGLGFCILFAFIGAFTFVNFVLVRPPLSLGMMHLGLVYVVFLPSILTTL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAGRIAARTGIRPAIWGSLGLAGLGLLLMLSPRLALVLSGMVLVGAGTFFAQAVTTGFVG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KAATHDQGVASGLYLASYFAGGIVGTAVLGQLFDRVGWSACVAGIAAVLVVAALLAGRLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
TSDAQGRLGAASG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]