| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146339422
Identifier: 146339422
GI number: 146339422
Start: 2565791
End: 2566567
Strand: Reverse
Name: 146339422
Synonym: BRADO2408
Alternate gene names: NA
Gene position: 2566567-2565791 (Counterclockwise)
Preceding gene: 146339423
Following gene: 146339420
Centisome position: 34.42
GC content: 67.7
Gene sequence:
>777_bases ATGAGGCCCTACGCGCTCCTCGCTACGGCTCTGCTGATCTTGGCGCTGCCCGTGCTGGCCGGCGAGATCGCGCCCTCCGA CCGCCGCTCCGGCTATGAGTTCATGTCGTCCGACAGCAAGGCTATGCAGGATGACGACACCGCCAATCCCGCGATGCTGT CGGTGCTCGATGGCGAGACGCTGTGGAGCACGAAGTCCGGCGCGGCAAACAAGTCCTGCAACGACTGCCACGGGGACGTC ACCGTCGGCATGAAGGGCACGGCGGCACGCTATCCAGCCTTCGACGCAACGAGCGCCACGCCGGTCGATCTCGGCCAACG CGTCAATCTCTGCCGCAGGCAGCATCAGCAAGCGGATCCCTTTGCGCCAGAGAGCCGCGAGTTGCTCGCGCTGACGGCGC TGATCGCAAAGCAGTCGCGCGGCATGCCGATCAACGCCGGCGACGATCCACGCCTCGCCTCATCGGTCGCGCGCGGCCGC GAGCTGTTCTTCCAGCGCCAGGGCCAGCTCAACCTCGCCTGCGCCAATTGCCACGACGACAATTGGGACAGGCACCTCGC GGGCTCGTCCATTACGCAGGGGCAGCCGACCGGCTACCCGATCTACCGCCTGGAGTGGCAGGGCATGGGCTCGCTGCAGC GCCGCCTGCGCGGCTGCATGACCGGCGTCCGCGCCCAGGCTTTCGACTTCGACGCGCCGGACATGATCGCGCTCGAGCTC TATCTGATGTCGCGCGCACGCGGCATGAAGATCGACGCACCCGCGGTGCGGCCGTGA
Upstream 100 bases:
>100_bases TGTCGTTCTTCACAACGGCCAGCGAGAGCGGCAGGTTCGAATTCGAGTGGATCGGCGACAACGGCTTCGTCGCCACGGCG TCCGCGGCGATCACCGTCGA
Downstream 100 bases:
>100_bases GCGGTCAAGCCCCACGCGCCGTCAAGTGAGTGACTCGTCATGCCCGGGCTTGACGGCCGAGAGACCTTCGGCCCCAAGAT CCTCACGCCTCCATTTTCCT
Product: putative diheme cytochrome C/sulfur oxidizing protein soxA
Products: NA
Alternate protein names: Diheme Cytochrome C; Sulfur Oxidation Protein; Diheme Cytochrome C SoxA; Sulfur Oxidation Protein SoxA; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; SoxA Protein; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRPYALLATALLILALPVLAGEIAPSDRRSGYEFMSSDSKAMQDDDTANPAMLSVLDGETLWSTKSGAANKSCNDCHGDV TVGMKGTAARYPAFDATSATPVDLGQRVNLCRRQHQQADPFAPESRELLALTALIAKQSRGMPINAGDDPRLASSVARGR ELFFQRQGQLNLACANCHDDNWDRHLAGSSITQGQPTGYPIYRLEWQGMGSLQRRLRGCMTGVRAQAFDFDAPDMIALEL YLMSRARGMKIDAPAVRP
Sequences:
>Translated_258_residues MRPYALLATALLILALPVLAGEIAPSDRRSGYEFMSSDSKAMQDDDTANPAMLSVLDGETLWSTKSGAANKSCNDCHGDV TVGMKGTAARYPAFDATSATPVDLGQRVNLCRRQHQQADPFAPESRELLALTALIAKQSRGMPINAGDDPRLASSVARGR ELFFQRQGQLNLACANCHDDNWDRHLAGSSITQGQPTGYPIYRLEWQGMGSLQRRLRGCMTGVRAQAFDFDAPDMIALEL YLMSRARGMKIDAPAVRP >Mature_258_residues MRPYALLATALLILALPVLAGEIAPSDRRSGYEFMSSDSKAMQDDDTANPAMLSVLDGETLWSTKSGAANKSCNDCHGDV TVGMKGTAARYPAFDATSATPVDLGQRVNLCRRQHQQADPFAPESRELLALTALIAKQSRGMPINAGDDPRLASSVARGR ELFFQRQGQLNLACANCHDDNWDRHLAGSSITQGQPTGYPIYRLEWQGMGSLQRRLRGCMTGVRAQAFDFDAPDMIALEL YLMSRARGMKIDAPAVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28091; Mature: 28091
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPYALLATALLILALPVLAGEIAPSDRRSGYEFMSSDSKAMQDDDTANPAMLSVLDGET CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCH LWSTKSGAANKSCNDCHGDVTVGMKGTAARYPAFDATSATPVDLGQRVNLCRRQHQQADP HCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC FAPESRELLALTALIAKQSRGMPINAGDDPRLASSVARGRELFFQRQGQLNLACANCHDD CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC NWDRHLAGSSITQGQPTGYPIYRLEWQGMGSLQRRLRGCMTGVRAQAFDFDAPDMIALEL CCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YLMSRARGMKIDAPAVRP HHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRPYALLATALLILALPVLAGEIAPSDRRSGYEFMSSDSKAMQDDDTANPAMLSVLDGET CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCH LWSTKSGAANKSCNDCHGDVTVGMKGTAARYPAFDATSATPVDLGQRVNLCRRQHQQADP HCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC FAPESRELLALTALIAKQSRGMPINAGDDPRLASSVARGRELFFQRQGQLNLACANCHDD CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC NWDRHLAGSSITQGQPTGYPIYRLEWQGMGSLQRRLRGCMTGVRAQAFDFDAPDMIALEL CCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YLMSRARGMKIDAPAVRP HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA