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The map label for this gene is csoS1C [H]

Identifier: 146339304

GI number: 146339304

Start: 2429060

End: 2429368

Strand: Direct

Name: csoS1C [H]

Synonym: BRADO2280

Alternate gene names: 146339304

Gene position: 2429060-2429368 (Clockwise)

Preceding gene: 146339303

Following gene: 146339305

Centisome position: 32.58

GC content: 72.82

Gene sequence:

>309_bases
ATGATCGAGACACGCGGCCTTGTGCCGGCGATCGAGGCGGCGGACGCGATGACCAAGGCCTCCGAGGTGCGGCTGATCGG
CCGGCAGTTCGTCGGCGGCGGCTACGTCACAGTGATGGTGCGCGGCGAGACCGGCGCGGTCAACGCCGCGGTGCGCGCCG
GCGCCGATGCCTGCGAGCGCGTCGGCGACGGCCTGGCGGCCGCGCATATCATCGCGCGCCCGCACATCGAGGTCGAGCAC
GTGCTGCCGCGACCGGGCGTGACGCGTCTCGAGGACCAGAGCATGCCGCGCATTCCGGCGGCAGAGTGA

Upstream 100 bases:

>100_bases
GCTCTGGCGCGCCTGACGGCGAAACGCGGCTGAGCGGACGATCAACATCGAGCGAAGGGAGAGGACGATGGCGACAGAGA
AGATGGGAATTGCGCTGGGC

Downstream 100 bases:

>100_bases
CCACTCATCCGGTGAGCGGATCGTTCGAAGCGACGCCAGCCGGAGATCAAACACCATCATAAGGATCGGACAGGAGAGGA
TAATGGCAAGCGAGCGATTT

Product: major carboxysome shell protein 1C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHIEVEH
VLPRPGVTRLEDQSMPRIPAAE

Sequences:

>Translated_102_residues
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHIEVEH
VLPRPGVTRLEDQSMPRIPAAE
>Mature_102_residues
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHIEVEH
VLPRPGVTRLEDQSMPRIPAAE

Specific function: Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=83, Percent_Identity=54.2168674698795, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10696; Mature: 10696

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCHHHHHH
VGDGLAAAHIIARPHIEVEHVLPRPGVTRLEDQSMPRIPAAE
HCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCHHHHHH
VGDGLAAAHIIARPHIEVEHVLPRPGVTRLEDQSMPRIPAAE
HCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934888 [H]