| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is katN [C]
Identifier: 146339210
GI number: 146339210
Start: 2306618
End: 2307886
Strand: Direct
Name: katN [C]
Synonym: BRADO2172
Alternate gene names: 146339210
Gene position: 2306618-2307886 (Clockwise)
Preceding gene: 146339205
Following gene: 146339213
Centisome position: 30.93
GC content: 65.17
Gene sequence:
>1269_bases ATGTATCACCACGTCAAGAAGCTGATGTTCACCGTCCGTGTCGACGAGCCGGATCCGCGCTTCGGCAACATGCTGCTCGA GCAGTTCGGCGGCGCCAATGGCGAGCTCGCCGCTGCCATGCAGTACTCGATCCAGGGGCTGAATTGCGAGGATCCCGATC GCAAGGATCTGTTGATGGATATCGGCACCGAGGAGCTCAGCCATCTCGAGGTCGTCGGCACGCTGGCGCGCCTGCATCTG AAGCCGTCGAAGTTCGATCGCGAGGCCGCCGAGGCCGACCCGCTGATCGCGATCGCCGGCGGCGGCGGCGTGAACCTGTT CAACTCGCAGGGCAATGCGTGGACCGCGGACTATCTGAAGATCACCGGCGAGCTCGACGTCGACCTGCGCAGCAACATCG CCGCCGAGGCGCGCGCCAAGATCGTCTATGAGCGGCTGATCAATTTCACCGACGATGCCGGCACCAAGGACGCGCTGCAG TTCCTGATGACGCGCGAGATCACCCACATGAAGGCGTTCGCGATGGCGTTGGAGAGCATGAACAAGCCGGCCTTCAGCGT CGGCCGCATCGCGCCGACACCGGGCCTCGTCGATCAGTTCTTCAACGACTCCAGCGGCTCGGGCGATCACGGCGAGATCG ACACCCGCGGCCCATGGAACGAGGGCGGCGACTGGGTCTTCACGGAATCGCCGGCGATCCAGGCCACCGAGAACGGTGCG TCCAGCGCGATCGTCACCGAGAGCTCGCCGCCGGTCGACGAGGCCGGCCTCGGCGATCTCCTGATCGAGGAGCTCAGAGA CATCCTGCACGCCGAGAAGCAGCTCACCAAGGCGCTGCCGAAGATGGCCGAAGCCGCGCGCTTCGATCAGCTGCGCGAAT TGTTCGAGCAGCATCTTGTGGAGACCGAGGCCCAGATCGAGCGCATCAACGCGTGCTTCGAGATGCTCGGCACGACCCCC AAGGCCAAGCCCTGCAAGGGCATGATGGGTCTGGTCGAGGAGGGGCAGGAGATCATCGCGCAAGGCGAAGAGAAGGAGGA CGCCGCCGCCGACCTCGCCTTGATCGGCGCGGCGCAGCGCGTCGAGCATTACGAGATGTCCGGCTACACCACCGCCCGCA ACCTCGCCTCGCAACTCCGCCACAGCGCCGTCGTCGCGCTGCTGTCGAAGTCGCTGGCGGAAGAGGAGAACGCCGATCAG CTGCTCAACCAGGTCGCAAGATCGCTGATGTCGGTCGCCAAGATGCCGGCCGCCATCGAGCAGGCGTGA
Upstream 100 bases:
>100_bases GCTGCGACCTTTGCGCGCCCGATCCGCCGCGAAAGGTAAGGAACAACCGCGATGGCCGGTCGTTCGCCCTTGCATCCTCC GCAAACGTCCGAGGCCTCCC
Downstream 100 bases:
>100_bases CGAGGGTGCAGGGCGGATGATCGCAGCGTCATCCGCCCTTGTCCCAGGGGAAGACAACGGTGACTCCCCTTGGCCAAATC GCCTGGGGGACGATGAGCTC
Product: non-heme manganese-containing catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MYHHVKKLMFTVRVDEPDPRFGNMLLEQFGGANGELAAAMQYSIQGLNCEDPDRKDLLMDIGTEELSHLEVVGTLARLHL KPSKFDREAAEADPLIAIAGGGGVNLFNSQGNAWTADYLKITGELDVDLRSNIAAEARAKIVYERLINFTDDAGTKDALQ FLMTREITHMKAFAMALESMNKPAFSVGRIAPTPGLVDQFFNDSSGSGDHGEIDTRGPWNEGGDWVFTESPAIQATENGA SSAIVTESSPPVDEAGLGDLLIEELRDILHAEKQLTKALPKMAEAARFDQLRELFEQHLVETEAQIERINACFEMLGTTP KAKPCKGMMGLVEEGQEIIAQGEEKEDAAADLALIGAAQRVEHYEMSGYTTARNLASQLRHSAVVALLSKSLAEEENADQ LLNQVARSLMSVAKMPAAIEQA
Sequences:
>Translated_422_residues MYHHVKKLMFTVRVDEPDPRFGNMLLEQFGGANGELAAAMQYSIQGLNCEDPDRKDLLMDIGTEELSHLEVVGTLARLHL KPSKFDREAAEADPLIAIAGGGGVNLFNSQGNAWTADYLKITGELDVDLRSNIAAEARAKIVYERLINFTDDAGTKDALQ FLMTREITHMKAFAMALESMNKPAFSVGRIAPTPGLVDQFFNDSSGSGDHGEIDTRGPWNEGGDWVFTESPAIQATENGA SSAIVTESSPPVDEAGLGDLLIEELRDILHAEKQLTKALPKMAEAARFDQLRELFEQHLVETEAQIERINACFEMLGTTP KAKPCKGMMGLVEEGQEIIAQGEEKEDAAADLALIGAAQRVEHYEMSGYTTARNLASQLRHSAVVALLSKSLAEEENADQ LLNQVARSLMSVAKMPAAIEQA >Mature_422_residues MYHHVKKLMFTVRVDEPDPRFGNMLLEQFGGANGELAAAMQYSIQGLNCEDPDRKDLLMDIGTEELSHLEVVGTLARLHL KPSKFDREAAEADPLIAIAGGGGVNLFNSQGNAWTADYLKITGELDVDLRSNIAAEARAKIVYERLINFTDDAGTKDALQ FLMTREITHMKAFAMALESMNKPAFSVGRIAPTPGLVDQFFNDSSGSGDHGEIDTRGPWNEGGDWVFTESPAIQATENGA SSAIVTESSPPVDEAGLGDLLIEELRDILHAEKQLTKALPKMAEAARFDQLRELFEQHLVETEAQIERINACFEMLGTTP KAKPCKGMMGLVEEGQEIIAQGEEKEDAAADLALIGAAQRVEHYEMSGYTTARNLASQLRHSAVVALLSKSLAEEENADQ LLNQVARSLMSVAKMPAAIEQA
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
Organism=Escherichia coli, GI1787512, Length=151, Percent_Identity=42.3841059602649, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 45987; Mature: 45987
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHHVKKLMFTVRVDEPDPRFGNMLLEQFGGANGELAAAMQYSIQGLNCEDPDRKDLLMD CHHHHEEHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH IGTEELSHLEVVGTLARLHLKPSKFDREAAEADPLIAIAGGGGVNLFNSQGNAWTADYLK CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEHHEE ITGELDVDLRSNIAAEARAKIVYERLINFTDDAGTKDALQFLMTREITHMKAFAMALESM EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NKPAFSVGRIAPTPGLVDQFFNDSSGSGDHGEIDTRGPWNEGGDWVFTESPAIQATENGA CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCC SSAIVTESSPPVDEAGLGDLLIEELRDILHAEKQLTKALPKMAEAARFDQLRELFEQHLV CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETEAQIERINACFEMLGTTPKAKPCKGMMGLVEEGQEIIAQGEEKEDAAADLALIGAAQR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VEHYEMSGYTTARNLASQLRHSAVVALLSKSLAEEENADQLLNQVARSLMSVAKMPAAIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHC QA CC >Mature Secondary Structure MYHHVKKLMFTVRVDEPDPRFGNMLLEQFGGANGELAAAMQYSIQGLNCEDPDRKDLLMD CHHHHEEHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH IGTEELSHLEVVGTLARLHLKPSKFDREAAEADPLIAIAGGGGVNLFNSQGNAWTADYLK CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEHHEE ITGELDVDLRSNIAAEARAKIVYERLINFTDDAGTKDALQFLMTREITHMKAFAMALESM EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NKPAFSVGRIAPTPGLVDQFFNDSSGSGDHGEIDTRGPWNEGGDWVFTESPAIQATENGA CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCC SSAIVTESSPPVDEAGLGDLLIEELRDILHAEKQLTKALPKMAEAARFDQLRELFEQHLV CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETEAQIERINACFEMLGTTPKAKPCKGMMGLVEEGQEIIAQGEEKEDAAADLALIGAAQR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VEHYEMSGYTTARNLASQLRHSAVVALLSKSLAEEENADQLLNQVARSLMSVAKMPAAIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHC QA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]