| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339125
Identifier: 146339125
GI number: 146339125
Start: 2215674
End: 2216468
Strand: Reverse
Name: 146339125
Synonym: BRADO2079
Alternate gene names: NA
Gene position: 2216468-2215674 (Counterclockwise)
Preceding gene: 146339128
Following gene: 146339122
Centisome position: 29.72
GC content: 68.05
Gene sequence:
>795_bases ATGCAGGCAGGGTTTGCGTTTACGAAGCTGGCCGACCGCCTGACCAGCCTGATCGAGCTGTCCACCGACGATCTTGAGCT CCTGTCGCGGATGCCCAGCTCCATTCGCAGCTTCGTTCCGCATGAGGAGGTCTGGCGCAAGGACGATCAACCCTCAGCCT GCTGCCTGCTTCTGCAGGGCTATCTCTGCTGGAAGGATACCGAGGCCGGCGCCGGCCAGATCACCGCGATCTACGTTCCA GGCGATGTGCCCGATCTCTTCACGACCATCGTGCCGCGGGTGAACGCGCAGCTTTGCGCGCTCAGTCCGGCCGTGGCGGC GTTCGTGCCGCACGGCTTCTTCCGCGAGGCTCGCGCACACTCCGCACGGCTGGCCCAGGCGCTGTCTCTGCTGATGCTGG CCGATGCGGCCGCGCTGCGGACGTGGCTCACCAGTCTCGGCAGCCGGGACTCGCTGAGCCGGGTGGCGCATCTGATCTGC GAGATCACGATGCGGCTGCGGGCCGTCGGGCTCGGGCGAGACCTGCGCTTCGCGTCGCCATTCACGCAGTCCGACCTCGC GGCGATCTGCGGCATCTCGCCGGTGCACGCGAACCGGACCATCCAGGACCTCCGCCGCCGAGCCCTGCTGCACTGGCATT CGCGCACGATCACCGTCACGGATTGGGACGGGCTGACCCGGCTGGCCGGCTTCCGGCCGGACTATCTGATGCTGCGCCAG CCGCCGGCCCTGGATCTCCAAACCCCCGCCCAGCAGGACGCGCGTTCTCCGCTCGAATCTTCCGCACCGGGCTGA
Upstream 100 bases:
>100_bases CAACGGGAACAATAGGAACGATCCACCCCGCCAATGTTGAACTCCATTGTGAGTGGGAAGGGGCCGCCGGCGATCCGGCG GCTGATGAGGACGACGCCGG
Downstream 100 bases:
>100_bases TCGCAGCGACACGTTCCCGAAGACATTGTGCAAGCTCCGCGACGACCCCGGACCAGTCTCCGGGATGACGCTGGTGAAAC AACCGCGCTCGCGGATACCA
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Crp/Fnr-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Fnr-Type; Regulatory Protein Crp; Transcriptional Regulator Crp; Crp-Type Transcriptional Activatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ PPALDLQTPAQQDARSPLESSAPG
Sequences:
>Translated_264_residues MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ PPALDLQTPAQQDARSPLESSAPG >Mature_264_residues MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ PPALDLQTPAQQDARSPLESSAPG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29072; Mature: 29072
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQG CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH YLCWKDTEAGAGQITAIYVPGDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAH HHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH SARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLICEITMRLRAVGLGRDLRFASP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEECC PPALDLQTPAQQDARSPLESSAPG CCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQG CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH YLCWKDTEAGAGQITAIYVPGDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAH HHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH SARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLICEITMRLRAVGLGRDLRFASP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEECC PPALDLQTPAQQDARSPLESSAPG CCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA