Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146339125

Identifier: 146339125

GI number: 146339125

Start: 2215674

End: 2216468

Strand: Reverse

Name: 146339125

Synonym: BRADO2079

Alternate gene names: NA

Gene position: 2216468-2215674 (Counterclockwise)

Preceding gene: 146339128

Following gene: 146339122

Centisome position: 29.72

GC content: 68.05

Gene sequence:

>795_bases
ATGCAGGCAGGGTTTGCGTTTACGAAGCTGGCCGACCGCCTGACCAGCCTGATCGAGCTGTCCACCGACGATCTTGAGCT
CCTGTCGCGGATGCCCAGCTCCATTCGCAGCTTCGTTCCGCATGAGGAGGTCTGGCGCAAGGACGATCAACCCTCAGCCT
GCTGCCTGCTTCTGCAGGGCTATCTCTGCTGGAAGGATACCGAGGCCGGCGCCGGCCAGATCACCGCGATCTACGTTCCA
GGCGATGTGCCCGATCTCTTCACGACCATCGTGCCGCGGGTGAACGCGCAGCTTTGCGCGCTCAGTCCGGCCGTGGCGGC
GTTCGTGCCGCACGGCTTCTTCCGCGAGGCTCGCGCACACTCCGCACGGCTGGCCCAGGCGCTGTCTCTGCTGATGCTGG
CCGATGCGGCCGCGCTGCGGACGTGGCTCACCAGTCTCGGCAGCCGGGACTCGCTGAGCCGGGTGGCGCATCTGATCTGC
GAGATCACGATGCGGCTGCGGGCCGTCGGGCTCGGGCGAGACCTGCGCTTCGCGTCGCCATTCACGCAGTCCGACCTCGC
GGCGATCTGCGGCATCTCGCCGGTGCACGCGAACCGGACCATCCAGGACCTCCGCCGCCGAGCCCTGCTGCACTGGCATT
CGCGCACGATCACCGTCACGGATTGGGACGGGCTGACCCGGCTGGCCGGCTTCCGGCCGGACTATCTGATGCTGCGCCAG
CCGCCGGCCCTGGATCTCCAAACCCCCGCCCAGCAGGACGCGCGTTCTCCGCTCGAATCTTCCGCACCGGGCTGA

Upstream 100 bases:

>100_bases
CAACGGGAACAATAGGAACGATCCACCCCGCCAATGTTGAACTCCATTGTGAGTGGGAAGGGGCCGCCGGCGATCCGGCG
GCTGATGAGGACGACGCCGG

Downstream 100 bases:

>100_bases
TCGCAGCGACACGTTCCCGAAGACATTGTGCAAGCTCCGCGACGACCCCGGACCAGTCTCCGGGATGACGCTGGTGAAAC
AACCGCGCTCGCGGATACCA

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Crp/Fnr-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Fnr-Type; Regulatory Protein Crp; Transcriptional Regulator Crp; Crp-Type Transcriptional Activatory Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP
GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC
EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ
PPALDLQTPAQQDARSPLESSAPG

Sequences:

>Translated_264_residues
MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP
GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC
EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ
PPALDLQTPAQQDARSPLESSAPG
>Mature_264_residues
MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQGYLCWKDTEAGAGQITAIYVP
GDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAHSARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLIC
EITMRLRAVGLGRDLRFASPFTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ
PPALDLQTPAQQDARSPLESSAPG

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29072; Mature: 29072

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH
YLCWKDTEAGAGQITAIYVPGDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAH
HHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH
SARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLICEITMRLRAVGLGRDLRFASP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEECC
PPALDLQTPAQQDARSPLESSAPG
CCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQAGFAFTKLADRLTSLIELSTDDLELLSRMPSSIRSFVPHEEVWRKDDQPSACCLLLQG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH
YLCWKDTEAGAGQITAIYVPGDVPDLFTTIVPRVNAQLCALSPAVAAFVPHGFFREARAH
HHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH
SARLAQALSLLMLADAAALRTWLTSLGSRDSLSRVAHLICEITMRLRAVGLGRDLRFASP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FTQSDLAAICGISPVHANRTIQDLRRRALLHWHSRTITVTDWDGLTRLAGFRPDYLMLRQ
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEECC
PPALDLQTPAQQDARSPLESSAPG
CCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA