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The map label for this gene is cmoB [H]

Identifier: 146339118

GI number: 146339118

Start: 2209788

End: 2210552

Strand: Reverse

Name: cmoB [H]

Synonym: BRADO2072

Alternate gene names: 146339118

Gene position: 2210552-2209788 (Counterclockwise)

Preceding gene: 146339119

Following gene: 146339117

Centisome position: 29.65

GC content: 63.14

Gene sequence:

>765_bases
ATGACGAGCGACGTGCTCTCGCGCGATGAGATCCGCCGCCGGGTGGATGCGCTCGGGCCGTGGTTTCACAACCTCGACCT
GAGGGGCGTGCCGACCGCGCCCGCGCACTTCCTCGGCGACTATCCGAACGTGAAGTGGCGGCGCTTCGCCGACATTATCC
CGGATGATCTCACCGGCAAGTCCGTGCTCGACATCGGCTGCAATGCTGGCTTCTACGCCATGGAGATGAAGCGCCGCGGC
GCGATGCGCGTGCTCGGCCTCGACACCGACGACGATTATCTGGCGCAGGCGCGCTTCGCCGCCGACGTCAACGGACTGGA
CATCGAATTCCGAAAGCTCTCGACCTATGACGTCGGACAGCTCGGCGAGACCTTCGATCTCGTGATCTTCATGGGCGTGC
TCTACCATCTGCGTCATCCGCTGCTCGCGCTCGATCTGATCCGCGAGCACGTGGTCGGCGATCAGCTGCTGTTCCAGTCG
ATGCAGCGCGGCTCCGCCGAGATCGACGAGATCGCGCGCAACTATGATTTCTGGACGACCAGTCCTTTCGACAGTCCAGG
CTATCCCAAACTGCATTTCATCGAGCACAAATATGCCGATGACCCCACCAATTGGTGGGCGCCGAACCGCGCCTGCGTCG
AAGCCATGCTGCGCAGCGCCGGCTTTGCGATCCTCGCCCATCCCGAGGAGGAGGTCTATCTGTGCCGCAAGGTGCCGCGA
CCACAGCAGGACGGTCCCGTCTATCCAGCGCGAGGTGAGAGATGA

Upstream 100 bases:

>100_bases
TCGCACTGCTCGCCGCGTCACAGGACAGCGGCGGGCCGCGGCCGACCGTGCGCGCTGCTGTCCGCAGGGAGGTCCTTCCA
ACTCTTGACGGAGCAGGAGC

Downstream 100 bases:

>100_bases
TCGAGGCGGCGAAGATCTGGAACGAGCCGAACAACAAATCGCACTGGGACCTGCAGCTCGATCCGGACTGGGGGCGCTTT
GCGGAGACCGCGATCGCGAC

Product: putative 3-demethylubiquinone-9 3-O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTSDVLSRDEIRRRVDALGPWFHNLDLRGVPTAPAHFLGDYPNVKWRRFADIIPDDLTGKSVLDIGCNAGFYAMEMKRRG
AMRVLGLDTDDDYLAQARFAADVNGLDIEFRKLSTYDVGQLGETFDLVIFMGVLYHLRHPLLALDLIREHVVGDQLLFQS
MQRGSAEIDEIARNYDFWTTSPFDSPGYPKLHFIEHKYADDPTNWWAPNRACVEAMLRSAGFAILAHPEEEVYLCRKVPR
PQQDGPVYPARGER

Sequences:

>Translated_254_residues
MTSDVLSRDEIRRRVDALGPWFHNLDLRGVPTAPAHFLGDYPNVKWRRFADIIPDDLTGKSVLDIGCNAGFYAMEMKRRG
AMRVLGLDTDDDYLAQARFAADVNGLDIEFRKLSTYDVGQLGETFDLVIFMGVLYHLRHPLLALDLIREHVVGDQLLFQS
MQRGSAEIDEIARNYDFWTTSPFDSPGYPKLHFIEHKYADDPTNWWAPNRACVEAMLRSAGFAILAHPEEEVYLCRKVPR
PQQDGPVYPARGER
>Mature_253_residues
TSDVLSRDEIRRRVDALGPWFHNLDLRGVPTAPAHFLGDYPNVKWRRFADIIPDDLTGKSVLDIGCNAGFYAMEMKRRGA
MRVLGLDTDDDYLAQARFAADVNGLDIEFRKLSTYDVGQLGETFDLVIFMGVLYHLRHPLLALDLIREHVVGDQLLFQSM
QRGSAEIDEIARNYDFWTTSPFDSPGYPKLHFIEHKYADDPTNWWAPNRACVEAMLRSAGFAILAHPEEEVYLCRKVPRP
QQDGPVYPARGER

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 29015; Mature: 28884

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDVLSRDEIRRRVDALGPWFHNLDLRGVPTAPAHFLGDYPNVKWRRFADIIPDDLTGK
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCC
SVLDIGCNAGFYAMEMKRRGAMRVLGLDTDDDYLAQARFAADVNGLDIEFRKLSTYDVGQ
CEEEECCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
LGETFDLVIFMGVLYHLRHPLLALDLIREHVVGDQLLFQSMQRGSAEIDEIARNYDFWTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
SPFDSPGYPKLHFIEHKYADDPTNWWAPNRACVEAMLRSAGFAILAHPEEEVYLCRKVPR
CCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCC
PQQDGPVYPARGER
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TSDVLSRDEIRRRVDALGPWFHNLDLRGVPTAPAHFLGDYPNVKWRRFADIIPDDLTGK
CCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCC
SVLDIGCNAGFYAMEMKRRGAMRVLGLDTDDDYLAQARFAADVNGLDIEFRKLSTYDVGQ
CEEEECCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
LGETFDLVIFMGVLYHLRHPLLALDLIREHVVGDQLLFQSMQRGSAEIDEIARNYDFWTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
SPFDSPGYPKLHFIEHKYADDPTNWWAPNRACVEAMLRSAGFAILAHPEEEVYLCRKVPR
CCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCC
PQQDGPVYPARGER
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA