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The map label for this gene is ycaC [H]

Identifier: 146338917

GI number: 146338917

Start: 1982215

End: 1982775

Strand: Direct

Name: ycaC [H]

Synonym: BRADO1857

Alternate gene names: 146338917

Gene position: 1982215-1982775 (Clockwise)

Preceding gene: 146338914

Following gene: 146338918

Centisome position: 26.58

GC content: 72.19

Gene sequence:

>561_bases
ATGATCATTCCGACCCGGGACAACGCCGCCATCCTGTTCCTCGATCTGCAGGCGGAGATCGTCACCAACAGCCGCACGCG
CGGGATTCCTGAGCTCGCGCGCGCCGCCGCCGCGCTGGCCCGGCTCGCGAGTTTGCACCGGCTCCCGGCCTTTCTGTCCG
CCGTGCCGCCCGGCGGGCCGTTCCTCGCCGAGGTGACGTCGGAGCTGCCGGGCTATGAGCCGCGGATGCGGACGGAGACC
AGCGCGTTCGCCGATCACGGGCTGGTGGCGGCCTTGCAAGCCTCGGGGCGCAAGGCGTTGATCCTGGCCGGCGTCGCCAG
CGAGATCGTCGTGCAGCGGACCGCGCTCGATGCGCTCGCGGCGGGCTATGAAGTGTTCGTCGCCGTCGACGCCTGCGGCG
GTGTCGATCCGCGCACCGAGGACGCGGCGTGGCGGCGCATCGCGGCGGCTGGCGGCGCGACGACATCCGCCATCACCTTC
GCCGCCGAGCTCGCCGGCGACTTCACCACCGAGACCGGCGGCGCCACGCTCGGCATCCTGTACAGCCTGCTCGGAGCTTG
A

Upstream 100 bases:

>100_bases
AAGGCCGCGACAGCCCCGCAACGCATCCTGCGGCATCGATCAGCGCCGTGCCGCTCGACAATCTCGCGGCCAGCGGCGCC
ACCTGACGAGGGATTCTCGC

Downstream 100 bases:

>100_bases
GCCGCGCGCAGACCGGAGCTGCGCTCCCATGGCCGGTCGCGTGCCACCGAGCTCGCGCGGTGGATGACACCTGCACGGAA
GCCGTCTAAGACACGCGCCT

Product: cysteine hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIIPTRDNAAILFLDLQAEIVTNSRTRGIPELARAAAALARLASLHRLPAFLSAVPPGGPFLAEVTSELPGYEPRMRTET
SAFADHGLVAALQASGRKALILAGVASEIVVQRTALDALAAGYEVFVAVDACGGVDPRTEDAAWRRIAAAGGATTSAITF
AAELAGDFTTETGGATLGILYSLLGA

Sequences:

>Translated_186_residues
MIIPTRDNAAILFLDLQAEIVTNSRTRGIPELARAAAALARLASLHRLPAFLSAVPPGGPFLAEVTSELPGYEPRMRTET
SAFADHGLVAALQASGRKALILAGVASEIVVQRTALDALAAGYEVFVAVDACGGVDPRTEDAAWRRIAAAGGATTSAITF
AAELAGDFTTETGGATLGILYSLLGA
>Mature_186_residues
MIIPTRDNAAILFLDLQAEIVTNSRTRGIPELARAAAALARLASLHRLPAFLSAVPPGGPFLAEVTSELPGYEPRMRTET
SAFADHGLVAALQASGRKALILAGVASEIVVQRTALDALAAGYEVFVAVDACGGVDPRTEDAAWRRIAAAGGATTSAITF
AAELAGDFTTETGGATLGILYSLLGA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=181, Percent_Identity=31.4917127071823, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19104; Mature: 19104

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPTRDNAAILFLDLQAEIVTNSRTRGIPELARAAAALARLASLHRLPAFLSAVPPGGP
CCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLAEVTSELPGYEPRMRTETSAFADHGLVAALQASGRKALILAGVASEIVVQRTALDALA
HHHHHHHHCCCCCCCCCCCHHHHHHCCHHEEEECCCCEEEEEECHHHHHHHHHHHHHHHH
AGYEVFVAVDACGGVDPRTEDAAWRRIAAAGGATTSAITFAAELAGDFTTETGGATLGIL
CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
YSLLGA
HHHHCC
>Mature Secondary Structure
MIIPTRDNAAILFLDLQAEIVTNSRTRGIPELARAAAALARLASLHRLPAFLSAVPPGGP
CCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLAEVTSELPGYEPRMRTETSAFADHGLVAALQASGRKALILAGVASEIVVQRTALDALA
HHHHHHHHCCCCCCCCCCCHHHHHHCCHHEEEECCCCEEEEEECHHHHHHHHHHHHHHHH
AGYEVFVAVDACGGVDPRTEDAAWRRIAAAGGATTSAITFAAELAGDFTTETGGATLGIL
CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
YSLLGA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]