| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is luxQ [H]
Identifier: 146338894
GI number: 146338894
Start: 1959112
End: 1961475
Strand: Direct
Name: luxQ [H]
Synonym: BRADO1833
Alternate gene names: 146338894
Gene position: 1959112-1961475 (Clockwise)
Preceding gene: 146338893
Following gene: 146338895
Centisome position: 26.27
GC content: 64.64
Gene sequence:
>2364_bases ATGAGACCGGCCGACACCGGCGAAACCGGAGGACAGCCGTCCGCCTGCCTCGACGGCGGCCGGCGGCCGGCCCCGGCTGC GGCCGAGCCGCGCGCAAGGATGTGGACGATTGGCACGTCCGTGGCGATGGCCTCCGCCATGATCATGGCGGTCGAGCAGA TCACGGATCTGAAGCAGGACTGGATCGTCTCGCTGCTGATGCTGGCGATCGCGGCGATCATCATCATGGCTGTCTTGACG TCGATGCTGATCCGCAACAGCGCGCAGGCCAGGGCGATGACGCAGGCCCTGACGCGCCAGAACGAGCAGTTGGCGCAGAC CACGAAGCTCCTCAACGAAGCCCAGCGAATCGGCCGTCTCGGCCACTGGATGACGGCGGAAGGCGACGCGGCGGTCTGGT CCGAGGAGCTGTTCGAGATCACCGGCCTGGAGCCGTTGTCCAGCGTCTCCTTCAGCAAGATGATCGAGATCATCCATCCG GAGGATGTCGGGACCTACATCCGCGCAAGGGATCGCACGCTGAAGACGGGCTGCGCGCTGAAGCAGGACCTTCGCGTCAT TCGCCCGGATGGCGAGATCCGTTGGATCAGGATCGTGGCAGATCCCATCGACGACGTCGACGGCCGGTTCCGCGAGCGCT TCGGCATCGTTCAGGACATCACTGAGCGAAAGCAGGCGGAGGTCGCCGCCGATCAGGCACAGCAGCTGCTGCTCGATGCG ATCGAGGCGCTGACGAAGGGATTCGTGCTGTTCGACAAGGATGATCGATTTGTCCTCTCGAACACGCGGTTTCGCGAGAT GTTTCCCGGTTGGGCCACCTTGATGCGGCCCGGCATCTCGTTCACTGACCTGATGCGCAAGGCGCATGACCACGGGCTGG TGCGTCCGAAGGGCGACGGCTTCGAGGATTGGCTCGAGCGCAAGCGCGCCTGGCATCTCGGCGGCAGCCGCATGATCGAG CATCGCGAGATCAATGGACGCTGGATCCAGAGCGTCGACCATCGCATCTCCGATGGCGGCACCGTCTGCCTCGTGACAGA TATCACCGCCTTCAAGACGGTTCAGGCCGAGCTCGAGCAGAAGCTTGCTTATGTGCAGGCGATCCGCTCGGATCTCGAGG AGCAGAAGCGCGAGCTCGAGGCCACGGGGGCCGAGCTGCGCGCCGCGCGCGACGCCGCGGAGGCCGCCAACCGCGCCAAG TCCGATTTCCTGGCGATCATGAGCCACGAGATCAGGACGCCGCTGAGCGGCATGGTCGGCATGGTCGATCTGCTGCGCGG CACCTCGCTCAACGACGAGCAGAAACGCTACACGTCGCTCGCCAAGGAATCCGCGGATCTGCTGCTCCAGGTGATCAACG ACATCCTCGATTTCTCCAAGCTCGAGGCGGGGAAATTGAAGTCCGAATGCATCGATTTCGACGTTCCGAGCCTGGTCGAG AGCGCGGTGTCGTTCATGGGAGAGAAGGCCAGGAGACGCGGCCTCGACCTCAAGGTGAGCTTTGCGCCGGGCCTGCCGCA ATATCTCGAGGGCGATCCGACCCGCATCCGCCAAGTGATGCTGAACCTCGTCGGCAACGCCATCAAGTTCACCGAACAGG GCGCGATCGAGGTGCACGCCTCTCACCGCGAGCTCGACGACGGTGCGGTCGATCTCAGGATCGAGGTCATCGACAGCGGC ATCGGCATGTCTCAGGAGATCCAGGCTCAGATCTTCGATCCCTTCGTCCAGGCCGACACCTCGATCTCGCGCAAATACGG CGGCAGCGGACTTGGCCTTGCGATCTGCAAGCAGCTCTGCGCCATCATGGGCGGCAGCATCGGCGTCGAGAGCGAGCCTG GCCGCGGCAGCCGCTTCTGGTTCGAAGCCAGGTGCCAGCGGGGTGAAGCCCTGGCTCTGCCCGCCGAGACGGTCATCGAG GCGGTCGACCGCCCGCTCGAGATCCTCGTCGCCGAGGACAGTCCGATCATCGCGACCCTGATCAACAGCCTGCTGGTCAA GCAGGGCTTCAAGCCGACCATGGTCGGCAACGGCAGCAAGGCGGTCGCGGCAGTTTCGCAGAAGTCATACGATCTCGTCC TCATGGACGTGCAGATGCCCGAGATGGACGGCATCTCCGCGACCGAGGCCATCCGGCGGCTGCCGGGCCCGGAGCGCCAC GTCCCGATTATCGCGTTGACGGCCAATGCGCTGGTGGGACAGCGCGAGACCTATCTTGCTGCCGGCATGAACGACTATGT CACCAAGCCGATCCAGCCGGCCCTCTTGTTCGCGGCGATCCGCCGCTGGGCCCTGCCGCAATATGCAGATGCACCGCCGC TGCAGTCGGGCGGGGTCAGCCAGCTCGAGATGTTCGTGTCCTGA
Upstream 100 bases:
>100_bases TCGACCTGACCACGCCTGAGGAGATCACAGCGCATCTGCCGCTTCTGAGCGAGACGATCGGCGTCACGACCGACGAGCTC TCGCGCGTGGCGGATCGCGT
Downstream 100 bases:
>100_bases CGCCGTTCGTCGCGCCGATTGTGAGCGGTGGTGCGCGACGAAAAGTGCTTCGCAGGCCTGGAGCAGACGCAAAAGTAAAA TTTGCTACATCCGGTGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 787; Mature: 787
Protein sequence:
>787_residues MRPADTGETGGQPSACLDGGRRPAPAAAEPRARMWTIGTSVAMASAMIMAVEQITDLKQDWIVSLLMLAIAAIIIMAVLT SMLIRNSAQARAMTQALTRQNEQLAQTTKLLNEAQRIGRLGHWMTAEGDAAVWSEELFEITGLEPLSSVSFSKMIEIIHP EDVGTYIRARDRTLKTGCALKQDLRVIRPDGEIRWIRIVADPIDDVDGRFRERFGIVQDITERKQAEVAADQAQQLLLDA IEALTKGFVLFDKDDRFVLSNTRFREMFPGWATLMRPGISFTDLMRKAHDHGLVRPKGDGFEDWLERKRAWHLGGSRMIE HREINGRWIQSVDHRISDGGTVCLVTDITAFKTVQAELEQKLAYVQAIRSDLEEQKRELEATGAELRAARDAAEAANRAK SDFLAIMSHEIRTPLSGMVGMVDLLRGTSLNDEQKRYTSLAKESADLLLQVINDILDFSKLEAGKLKSECIDFDVPSLVE SAVSFMGEKARRRGLDLKVSFAPGLPQYLEGDPTRIRQVMLNLVGNAIKFTEQGAIEVHASHRELDDGAVDLRIEVIDSG IGMSQEIQAQIFDPFVQADTSISRKYGGSGLGLAICKQLCAIMGGSIGVESEPGRGSRFWFEARCQRGEALALPAETVIE AVDRPLEILVAEDSPIIATLINSLLVKQGFKPTMVGNGSKAVAAVSQKSYDLVLMDVQMPEMDGISATEAIRRLPGPERH VPIIALTANALVGQRETYLAAGMNDYVTKPIQPALLFAAIRRWALPQYADAPPLQSGGVSQLEMFVS
Sequences:
>Translated_787_residues MRPADTGETGGQPSACLDGGRRPAPAAAEPRARMWTIGTSVAMASAMIMAVEQITDLKQDWIVSLLMLAIAAIIIMAVLT SMLIRNSAQARAMTQALTRQNEQLAQTTKLLNEAQRIGRLGHWMTAEGDAAVWSEELFEITGLEPLSSVSFSKMIEIIHP EDVGTYIRARDRTLKTGCALKQDLRVIRPDGEIRWIRIVADPIDDVDGRFRERFGIVQDITERKQAEVAADQAQQLLLDA IEALTKGFVLFDKDDRFVLSNTRFREMFPGWATLMRPGISFTDLMRKAHDHGLVRPKGDGFEDWLERKRAWHLGGSRMIE HREINGRWIQSVDHRISDGGTVCLVTDITAFKTVQAELEQKLAYVQAIRSDLEEQKRELEATGAELRAARDAAEAANRAK SDFLAIMSHEIRTPLSGMVGMVDLLRGTSLNDEQKRYTSLAKESADLLLQVINDILDFSKLEAGKLKSECIDFDVPSLVE SAVSFMGEKARRRGLDLKVSFAPGLPQYLEGDPTRIRQVMLNLVGNAIKFTEQGAIEVHASHRELDDGAVDLRIEVIDSG IGMSQEIQAQIFDPFVQADTSISRKYGGSGLGLAICKQLCAIMGGSIGVESEPGRGSRFWFEARCQRGEALALPAETVIE AVDRPLEILVAEDSPIIATLINSLLVKQGFKPTMVGNGSKAVAAVSQKSYDLVLMDVQMPEMDGISATEAIRRLPGPERH VPIIALTANALVGQRETYLAAGMNDYVTKPIQPALLFAAIRRWALPQYADAPPLQSGGVSQLEMFVS >Mature_787_residues MRPADTGETGGQPSACLDGGRRPAPAAAEPRARMWTIGTSVAMASAMIMAVEQITDLKQDWIVSLLMLAIAAIIIMAVLT SMLIRNSAQARAMTQALTRQNEQLAQTTKLLNEAQRIGRLGHWMTAEGDAAVWSEELFEITGLEPLSSVSFSKMIEIIHP EDVGTYIRARDRTLKTGCALKQDLRVIRPDGEIRWIRIVADPIDDVDGRFRERFGIVQDITERKQAEVAADQAQQLLLDA IEALTKGFVLFDKDDRFVLSNTRFREMFPGWATLMRPGISFTDLMRKAHDHGLVRPKGDGFEDWLERKRAWHLGGSRMIE HREINGRWIQSVDHRISDGGTVCLVTDITAFKTVQAELEQKLAYVQAIRSDLEEQKRELEATGAELRAARDAAEAANRAK SDFLAIMSHEIRTPLSGMVGMVDLLRGTSLNDEQKRYTSLAKESADLLLQVINDILDFSKLEAGKLKSECIDFDVPSLVE SAVSFMGEKARRRGLDLKVSFAPGLPQYLEGDPTRIRQVMLNLVGNAIKFTEQGAIEVHASHRELDDGAVDLRIEVIDSG IGMSQEIQAQIFDPFVQADTSISRKYGGSGLGLAICKQLCAIMGGSIGVESEPGRGSRFWFEARCQRGEALALPAETVIE AVDRPLEILVAEDSPIIATLINSLLVKQGFKPTMVGNGSKAVAAVSQKSYDLVLMDVQMPEMDGISATEAIRRLPGPERH VPIIALTANALVGQRETYLAAGMNDYVTKPIQPALLFAAIRRWALPQYADAPPLQSGGVSQLEMFVS
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=253, Percent_Identity=44.2687747035573, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI1788713, Length=371, Percent_Identity=36.9272237196765, Blast_Score=220, Evalue=3e-58, Organism=Escherichia coli, GI48994928, Length=392, Percent_Identity=34.9489795918367, Blast_Score=209, Evalue=4e-55, Organism=Escherichia coli, GI87081816, Length=381, Percent_Identity=35.9580052493438, Blast_Score=184, Evalue=3e-47, Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=42.9824561403509, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=30.5309734513274, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790346, Length=254, Percent_Identity=32.6771653543307, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=28.0334728033473, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI1786600, Length=246, Percent_Identity=28.0487804878049, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=27.9279279279279, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=257, Percent_Identity=27.2373540856031, Blast_Score=83, Evalue=8e-17, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=29.4372294372294, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=28.3842794759825, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790300, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1787894, Length=248, Percent_Identity=23.7903225806452, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788394, Length=114, Percent_Identity=30.7017543859649, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788550, Length=111, Percent_Identity=35.1351351351351, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1789809, Length=115, Percent_Identity=32.1739130434783, Blast_Score=63, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=70, Percent_Identity=50, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6322000, Length=118, Percent_Identity=34.7457627118644, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 86658; Mature: 86658
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPADTGETGGQPSACLDGGRRPAPAAAEPRARMWTIGTSVAMASAMIMAVEQITDLKQD CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH WIVSLLMLAIAAIIIMAVLTSMLIRNSAQARAMTQALTRQNEQLAQTTKLLNEAQRIGRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHWMTAEGDAAVWSEELFEITGLEPLSSVSFSKMIEIIHPEDVGTYIRARDRTLKTGCAL CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH KQDLRVIRPDGEIRWIRIVADPIDDVDGRFRERFGIVQDITERKQAEVAADQAQQLLLDA HHCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEALTKGFVLFDKDDRFVLSNTRFREMFPGWATLMRPGISFTDLMRKAHDHGLVRPKGDG HHHHHCCCEEECCCCCEEECCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC FEDWLERKRAWHLGGSRMIEHREINGRWIQSVDHRISDGGTVCLVTDITAFKTVQAELEQ HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH KLAYVQAIRSDLEEQKRELEATGAELRAARDAAEAANRAKSDFLAIMSHEIRTPLSGMVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MVDLLRGTSLNDEQKRYTSLAKESADLLLQVINDILDFSKLEAGKLKSECIDFDVPSLVE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH SAVSFMGEKARRRGLDLKVSFAPGLPQYLEGDPTRIRQVMLNLVGNAIKFTEQGAIEVHA HHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEC SHRELDDGAVDLRIEVIDSGIGMSQEIQAQIFDPFVQADTSISRKYGGSGLGLAICKQLC CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH AIMGGSIGVESEPGRGSRFWFEARCQRGEALALPAETVIEAVDRPLEILVAEDSPIIATL HHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCHHHHHHHHCCCEEEEEECCCCHHHHH INSLLVKQGFKPTMVGNGSKAVAAVSQKSYDLVLMDVQMPEMDGISATEAIRRLPGPERH HHHHHHHCCCCCCEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCC VPIIALTANALVGQRETYLAAGMNDYVTKPIQPALLFAAIRRWALPQYADAPPLQSGGVS CCEEEEECCHHHCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLEMFVS HHHHHCC >Mature Secondary Structure MRPADTGETGGQPSACLDGGRRPAPAAAEPRARMWTIGTSVAMASAMIMAVEQITDLKQD CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH WIVSLLMLAIAAIIIMAVLTSMLIRNSAQARAMTQALTRQNEQLAQTTKLLNEAQRIGRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHWMTAEGDAAVWSEELFEITGLEPLSSVSFSKMIEIIHPEDVGTYIRARDRTLKTGCAL CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH KQDLRVIRPDGEIRWIRIVADPIDDVDGRFRERFGIVQDITERKQAEVAADQAQQLLLDA HHCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEALTKGFVLFDKDDRFVLSNTRFREMFPGWATLMRPGISFTDLMRKAHDHGLVRPKGDG HHHHHCCCEEECCCCCEEECCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC FEDWLERKRAWHLGGSRMIEHREINGRWIQSVDHRISDGGTVCLVTDITAFKTVQAELEQ HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH KLAYVQAIRSDLEEQKRELEATGAELRAARDAAEAANRAKSDFLAIMSHEIRTPLSGMVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MVDLLRGTSLNDEQKRYTSLAKESADLLLQVINDILDFSKLEAGKLKSECIDFDVPSLVE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH SAVSFMGEKARRRGLDLKVSFAPGLPQYLEGDPTRIRQVMLNLVGNAIKFTEQGAIEVHA HHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEC SHRELDDGAVDLRIEVIDSGIGMSQEIQAQIFDPFVQADTSISRKYGGSGLGLAICKQLC CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH AIMGGSIGVESEPGRGSRFWFEARCQRGEALALPAETVIEAVDRPLEILVAEDSPIIATL HHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCHHHHHHHHCCCEEEEEECCCCHHHHH INSLLVKQGFKPTMVGNGSKAVAAVSQKSYDLVLMDVQMPEMDGISATEAIRRLPGPERH HHHHHHHCCCCCCEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCC VPIIALTANALVGQRETYLAAGMNDYVTKPIQPALLFAAIRRWALPQYADAPPLQSGGVS CCEEEEECCHHHCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLEMFVS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]