| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is rsbP [H]
Identifier: 146338892
GI number: 146338892
Start: 1957516
End: 1958757
Strand: Direct
Name: rsbP [H]
Synonym: BRADO1831
Alternate gene names: 146338892
Gene position: 1957516-1958757 (Clockwise)
Preceding gene: 146338891
Following gene: 146338893
Centisome position: 26.25
GC content: 65.7
Gene sequence:
>1242_bases GTGCCTGAAGGGCTCGCGGACGCCCGGATCCTGATTGCCGACGATGATCCGCTCTGCCGGCGGCTGGTCGCCGGCGTGCT GCGCGCGCAGAAGTTCACCAACATCGAATTTGCGGAGGGCGGCCTGTCGACGATGGAGCAGGTGCGCCGCTTCCGCCCGG ACCTGCTGCTGCTCGACATGCAGATGCCGGATATGAGCGGGCTCGATGTCTGTCGCGAGATCCGCGCCCAGGCCGATTTC GCAGACGCGCCGATCCTGGTGCAGACCGCGACCGTCGATCGCAAGAAGATGGGCGAGCTGTTCGCTGCCGGCGCCTCGGA TTTTCTCTCCAAGCCGATCAATCCATCGGAGCTGATTGCCCGCGTCGTGGTGCATCTCGAACGCTGGAACTCGCTGCGCG CCCTGCGGGATTATCGCGAGCGCATCTCTGGCGAGCTCGAGGCCGCCCGTCGCATGCAGGTTGAACTGCTGCCGGATCCC ATCACCTTGCAATGGGCGGCGCGCGCTGCGGATTTGCGGATCGCAAGCTACAACAGATCGTCCTCGGAGCTCGGCGGCGA CCTCTGGGGCATGCTGCCGATCAGCAACGGCGCGTTTGGAATCTTCCTTGCCGACTTTACCGGCCACGGCATCAATGCCG CGTTGAATACGTTCCGCCTGCACGCGTTGATTCACGAATACAAGGCGTTGCACGATGATCCCGGCGGCTTGCTGTCGATG CTGAACGAGCGCCTCGTTCGTCTGCTGCGCATCGGACAATTCGCAACGTTCATGTACGTCGTTGTCGATCACCGCGCCGG CTTGCTGAAAGTCGCGTCCGCGGCCGCGCCGCCGGCCATTCTCGTGCAGGGGGTGGAGGGCCGTGCGCGGCTCTGCGACA GCAGCGGCTTTCCGCTCGGGATCGAGCGCGGCGTGCGCTATCGCACCTCGCGCCGCAAATTTCCGGCCGGTTCGCGGCTC CTGCTGTTCAGCGATGGACTGTCCGAATTCCCGGATACGAAGGGAAAGCGGATCGGCGACGATGGGCTGCAGGCGGCGCT GAATGCCTGCGAGCCCGCGCTTACGCCGCAGGAGGTGATCGATCGGCTATGCGCGGCTGCGGGCATCATCGATGGCAGCC CGCTGCCCGATGACACCACGATCGTGTGCCTCGATCGACGCGCGGCGCCTCGCAAAGGCGACGGCACGCGCGATCACGCC GCGAAGCAGCCGTCGGCTCTGTCGACCTTCGGAGGCCGCTGA
Upstream 100 bases:
>100_bases ATCGCGTGACGGTGCTCAACGGTGGAACGACGGTGCGGCTGGAGTTTCTGCGGTGAGCCCAGTCTTGAACACGGTCGAGT CCGCGGTCGACGAGCGGGGC
Downstream 100 bases:
>100_bases CGTGACCATCGCCCTCGACGTGCCGCTGATCGACCAGGATCAACTGGAGCTGCTGCGCGCGGCGCTCGACCCGGACGAAC TGCGCGCGATGCTGGCCGAG
Product: putative response regulator serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MPEGLADARILIADDDPLCRRLVAGVLRAQKFTNIEFAEGGLSTMEQVRRFRPDLLLLDMQMPDMSGLDVCREIRAQADF ADAPILVQTATVDRKKMGELFAAGASDFLSKPINPSELIARVVVHLERWNSLRALRDYRERISGELEAARRMQVELLPDP ITLQWAARAADLRIASYNRSSSELGGDLWGMLPISNGAFGIFLADFTGHGINAALNTFRLHALIHEYKALHDDPGGLLSM LNERLVRLLRIGQFATFMYVVVDHRAGLLKVASAAAPPAILVQGVEGRARLCDSSGFPLGIERGVRYRTSRRKFPAGSRL LLFSDGLSEFPDTKGKRIGDDGLQAALNACEPALTPQEVIDRLCAAAGIIDGSPLPDDTTIVCLDRRAAPRKGDGTRDHA AKQPSALSTFGGR
Sequences:
>Translated_413_residues MPEGLADARILIADDDPLCRRLVAGVLRAQKFTNIEFAEGGLSTMEQVRRFRPDLLLLDMQMPDMSGLDVCREIRAQADF ADAPILVQTATVDRKKMGELFAAGASDFLSKPINPSELIARVVVHLERWNSLRALRDYRERISGELEAARRMQVELLPDP ITLQWAARAADLRIASYNRSSSELGGDLWGMLPISNGAFGIFLADFTGHGINAALNTFRLHALIHEYKALHDDPGGLLSM LNERLVRLLRIGQFATFMYVVVDHRAGLLKVASAAAPPAILVQGVEGRARLCDSSGFPLGIERGVRYRTSRRKFPAGSRL LLFSDGLSEFPDTKGKRIGDDGLQAALNACEPALTPQEVIDRLCAAAGIIDGSPLPDDTTIVCLDRRAAPRKGDGTRDHA AKQPSALSTFGGR >Mature_412_residues PEGLADARILIADDDPLCRRLVAGVLRAQKFTNIEFAEGGLSTMEQVRRFRPDLLLLDMQMPDMSGLDVCREIRAQADFA DAPILVQTATVDRKKMGELFAAGASDFLSKPINPSELIARVVVHLERWNSLRALRDYRERISGELEAARRMQVELLPDPI TLQWAARAADLRIASYNRSSSELGGDLWGMLPISNGAFGIFLADFTGHGINAALNTFRLHALIHEYKALHDDPGGLLSML NERLVRLLRIGQFATFMYVVVDHRAGLLKVASAAAPPAILVQGVEGRARLCDSSGFPLGIERGVRYRTSRRKFPAGSRLL LFSDGLSEFPDTKGKRIGDDGLQAALNACEPALTPQEVIDRLCAAAGIIDGSPLPDDTTIVCLDRRAAPRKGDGTRDHAA KQPSALSTFGGR
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=128, Percent_Identity=36.71875, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1786599, Length=114, Percent_Identity=32.4561403508772, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789149, Length=109, Percent_Identity=31.1926605504587, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=112, Percent_Identity=29.4642857142857, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 45105; Mature: 44974
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGLADARILIADDDPLCRRLVAGVLRAQKFTNIEFAEGGLSTMEQVRRFRPDLLLLDM CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCEEEEEE QMPDMSGLDVCREIRAQADFADAPILVQTATVDRKKMGELFAAGASDFLSKPINPSELIA CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHH RVVVHLERWNSLRALRDYRERISGELEAARRMQVELLPDPITLQWAARAADLRIASYNRS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCEEEEEHHHHHCEEEEECCCC SSELGGDLWGMLPISNGAFGIFLADFTGHGINAALNTFRLHALIHEYKALHDDPGGLLSM CHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LNERLVRLLRIGQFATFMYVVVDHRAGLLKVASAAAPPAILVQGVEGRARLCDSSGFPLG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCC IERGVRYRTSRRKFPAGSRLLLFSDGLSEFPDTKGKRIGDDGLQAALNACEPALTPQEVI HHCCCHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH DRLCAAAGIIDGSPLPDDTTIVCLDRRAAPRKGDGTRDHAAKQPSALSTFGGR HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHCCCC >Mature Secondary Structure PEGLADARILIADDDPLCRRLVAGVLRAQKFTNIEFAEGGLSTMEQVRRFRPDLLLLDM CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCEEEEEE QMPDMSGLDVCREIRAQADFADAPILVQTATVDRKKMGELFAAGASDFLSKPINPSELIA CCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHH RVVVHLERWNSLRALRDYRERISGELEAARRMQVELLPDPITLQWAARAADLRIASYNRS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCEEEEEHHHHHCEEEEECCCC SSELGGDLWGMLPISNGAFGIFLADFTGHGINAALNTFRLHALIHEYKALHDDPGGLLSM CHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LNERLVRLLRIGQFATFMYVVVDHRAGLLKVASAAAPPAILVQGVEGRARLCDSSGFPLG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCC IERGVRYRTSRRKFPAGSRLLLFSDGLSEFPDTKGKRIGDDGLQAALNACEPALTPQEVI HHCCCHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH DRLCAAAGIIDGSPLPDDTTIVCLDRRAAPRKGDGTRDHAAKQPSALSTFGGR HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]