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The map label for this gene is dapA1 [H]

Identifier: 146338874

GI number: 146338874

Start: 1938642

End: 1939577

Strand: Direct

Name: dapA1 [H]

Synonym: BRADO1813

Alternate gene names: 146338874

Gene position: 1938642-1939577 (Clockwise)

Preceding gene: 146338873

Following gene: 146338875

Centisome position: 26.0

GC content: 66.67

Gene sequence:

>936_bases
GTGCCCATGACCGCTTCATCCAGAAAGCTTTACAAGGGCGTCTTCCCGGTCGCGCCGACCATCTTCGACGCCGACGGCCG
TCTCGACCTCGAGGGCCAGAAGCGCGCGATCGACTTCATGATCGATGCCGGTTCGCACGGCATCTGCATCCTCGCGAATT
TCTCCGAGCAGTTCGTGCTGACCGACGACGAGCGCGATCTCGTCATGACGACGGTGCTGGAGCATGTCGCCGGCCGCGTG
CCGGTGATCGTCACCACCACGCATTTCTCGACCTTCGTCTGTGCCGAGCGCTCGCGCCGCGCGCAGGACAAGGGCGCCGC
GATGGTCATGGTGATGCCGCCCTATCACGGCGCCACCTTCCGCGTGCCCGACAGCTCGATCTACGAGTTCTATCGCGGCG
TGTCGGATGCGATCTCGATCCCGATCATGGTGCAGGACGCGCCGGTCGCGGGCACCCCGCTGTCGGTGCCGCTGCTCGCG
CGCATGGCCAAGGAGATCGAGAACCTCGCTTATTTCAAGATCGAGGTGCCGCGCGCCGCCGACAAGCTGCGCGCGCTGAT
CGAGGCGGGCGGCGCTGACATCCAGGGCCCGTGGGACGGCGAGGAGGCGATCACCCTGATGGCCGATCTCGATGCCGGCG
CGACCGGCGCGATGACCGGCGGCGGCTATCCCGACGGCATCAGAAAGATCATCGATCCCTATTTCGCAGGCGATCGCGAC
GCTGCTGCCGCGGCCTATGAGCGCTGGCTGCCGCTGATCAACTACGAGAACCGGCAGTGCGGGCTTGCGACCTGCAAGAT
CCTGATGAAGGAGGGCGGCGTGATCAAGCACGACACGCTGCGCAGCCCCCAGCCGCCGATCCACCCGGCCACCCAAAAGG
GCCTGATCGAGATCGCGCGCCGGCTCGACCCGCTCGTGCTGCGCTGGGGACGCTGA

Upstream 100 bases:

>100_bases
GCTCTACATCGATCACGTGCTGCAGGCCGATCGCGGCGTGGATTTCGACTTCCTGGTCGGCCGCACCGGCTCGCCGGTGC
CGCGCGACAATCACTAAGAG

Downstream 100 bases:

>100_bases
GCCATGAGCGAGCTTCGTGTCGCCATCGTCGGCTTCGGCAAGATCGCCAGGGATCAGCACGTGCCGGCAATCGCCGCCAC
CGAGGGCGTGACCCTGACGG

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS 1 [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPMTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVLTDDERDLVMTTVLEHVAGRV
PVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATFRVPDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLA
RMAKEIENLAYFKIEVPRAADKLRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRD
AAAAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIARRLDPLVLRWGR

Sequences:

>Translated_311_residues
MPMTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVLTDDERDLVMTTVLEHVAGRV
PVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATFRVPDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLA
RMAKEIENLAYFKIEVPRAADKLRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRD
AAAAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIARRLDPLVLRWGR
>Mature_310_residues
PMTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVLTDDERDLVMTTVLEHVAGRVP
VIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATFRVPDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLAR
MAKEIENLAYFKIEVPRAADKLRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRDA
AAAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIARRLDPLVLRWGR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=189, Percent_Identity=30.6878306878307, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI87082415, Length=181, Percent_Identity=24.3093922651934, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33974; Mature: 33842

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVL
CCCCCCCHHHHHCCCCCCCEEECCCCEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEE
TDDERDLVMTTVLEHVAGRVPVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATF
ECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEE
RVPDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLARMAKEIENLAYFKIEVPRAA
ECCCHHHHHHHCCHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCHHH
DKLRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRD
HHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AAAAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIAR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
RLDPLVLRWGR
HCCHHEEECCC
>Mature Secondary Structure 
PMTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVL
CCCCCCHHHHHCCCCCCCEEECCCCEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEE
TDDERDLVMTTVLEHVAGRVPVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATF
ECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEE
RVPDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLARMAKEIENLAYFKIEVPRAA
ECCCHHHHHHHCCHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCHHH
DKLRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRD
HHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AAAAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIAR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
RLDPLVLRWGR
HCCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]