| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is galE [C]
Identifier: 146338854
GI number: 146338854
Start: 1914006
End: 1914977
Strand: Direct
Name: galE [C]
Synonym: BRADO1793
Alternate gene names: 146338854
Gene position: 1914006-1914977 (Clockwise)
Preceding gene: 146338853
Following gene: 146338855
Centisome position: 25.67
GC content: 68.42
Gene sequence:
>972_bases ATGCATGTCCTGATCTTCGGCGGCGCCGGCTTCGTCGGACTTAACACTGCGCAAGGACTGCTCGAGCGTGGGCATGCGGT GACCGTATTCGATGCGGCACCGCTGCCGAGCGCGGCGCAGCGCGCCTTCGCACCGTTTGGTGAACGGCTGCACGTGATCA ACGGCGACGTCATAGACGCCGACGCCGTCGCGGCCGCTATCGGCAATGGCTGCGATGCCGTCGTCATGGGCGCCGCGATC ACCGCCGGTCCCGAACGCGATGCGTCCGATCCCGAGCGCATCCTCGCCGTGAATCTGCTCGCACAGGTACCGATCTTGCA GGCCGCGCGGCGCAGCGGCGTCCGGCGCGTGATCAATCTGTCGTCGGCTGCATCCTACGGCGCCAGCGGCCAGCGCTTCG CGGTGCTGGAGGAGACCACGCCGTGCGAACCGGTGTCGCTGTATGCGATCACGAAATTCACCTCCGAACGCGTCGCCGCG CGACTGTCAGATCTTTGGCAGACCGACGTCATCAGCGTGCGCTTGTCCGCCGTGTTCGGGCCGTTCGAGCGCGGCGGGGG CGTGCGCGATACGCCATCGCCGCAGGCGCTGATCGCGGCCTGCTGCGCGCGCAGCGAGCCGGCGTTGTTGAACGAAGCCG GCGACAAGGACTGGGTCTACGCGGTCGATGTCGCCGATGCCGTGTGCCTGCTGCTCGAAGCGGAGAAGCCGCAGCAGACG CTCTACAACATCTCGAACGAGGCGACGTTTACGGCCGAGGCGTGGGGCCGCGCCTTCGCGAGCGGTCGGTCCGGCTTCAC CTGCCGCCTCGCGGAGCCGGGCGAAACGCCGACGGTGCCTGTGTTCGCGCCGGTCCGCGGCCGGCTGTCGACGATGCGGC TGGCGAACGAGTTCGGCTGGCGCGCGCGGTTCGACTGCGCAGGCTCCGCCGAACATTTCGGCCGCTGGTTCGATCAGTAC GGGAGGGATTGA
Upstream 100 bases:
>100_bases AGAGCAGGTCAGGCGGCGCGCACGCTGCGTTTCCTCGTGGCGAGGAGGCTGCGCCAGCAGCCGTCTCGAACCATGAGGCC CCGATGGAGAGGCTTTTCGC
Downstream 100 bases:
>100_bases GATGCGGCTGAAGGATAAGGTCGCCATCATCACCGGCGGCGGCTCCGGCATCGGCCGCGCCAGCGCCGTGATGTTCGCGC GCGAAGGTGCATTCATCGCG
Product: putative UDP-glucose 4-epimerase
Products: NA
Alternate protein names: Cholesterol dehydrogenase; 3-beta-hydroxy-Delta(5)-steroid dehydrogenase; 3-beta-HSD; 3BHSD; 3-beta hydroxysterol dehydrogenase; 3-beta-hydroxy-5-ene steroid dehydrogenase; Progesterone reductase; Steroid Delta-isomerase; Delta-5-3-ketosteroid isomerase [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHVLIFGGAGFVGLNTAQGLLERGHAVTVFDAAPLPSAAQRAFAPFGERLHVINGDVIDADAVAAAIGNGCDAVVMGAAI TAGPERDASDPERILAVNLLAQVPILQAARRSGVRRVINLSSAASYGASGQRFAVLEETTPCEPVSLYAITKFTSERVAA RLSDLWQTDVISVRLSAVFGPFERGGGVRDTPSPQALIAACCARSEPALLNEAGDKDWVYAVDVADAVCLLLEAEKPQQT LYNISNEATFTAEAWGRAFASGRSGFTCRLAEPGETPTVPVFAPVRGRLSTMRLANEFGWRARFDCAGSAEHFGRWFDQY GRD
Sequences:
>Translated_323_residues MHVLIFGGAGFVGLNTAQGLLERGHAVTVFDAAPLPSAAQRAFAPFGERLHVINGDVIDADAVAAAIGNGCDAVVMGAAI TAGPERDASDPERILAVNLLAQVPILQAARRSGVRRVINLSSAASYGASGQRFAVLEETTPCEPVSLYAITKFTSERVAA RLSDLWQTDVISVRLSAVFGPFERGGGVRDTPSPQALIAACCARSEPALLNEAGDKDWVYAVDVADAVCLLLEAEKPQQT LYNISNEATFTAEAWGRAFASGRSGFTCRLAEPGETPTVPVFAPVRGRLSTMRLANEFGWRARFDCAGSAEHFGRWFDQY GRD >Mature_323_residues MHVLIFGGAGFVGLNTAQGLLERGHAVTVFDAAPLPSAAQRAFAPFGERLHVINGDVIDADAVAAAIGNGCDAVVMGAAI TAGPERDASDPERILAVNLLAQVPILQAARRSGVRRVINLSSAASYGASGQRFAVLEETTPCEPVSLYAITKFTSERVAA RLSDLWQTDVISVRLSAVFGPFERGGGVRDTPSPQALIAACCARSEPALLNEAGDKDWVYAVDVADAVCLLLEAEKPQQT LYNISNEATFTAEAWGRAFASGRSGFTCRLAEPGETPTVPVFAPVRGRLSTMRLANEFGWRARFDCAGSAEHFGRWFDQY GRD
Specific function: 3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively [H]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-beta-HSD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =1.1.1.145; =5.3.3.1 [H]
Molecular weight: Translated: 34345; Mature: 34345
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVLIFGGAGFVGLNTAQGLLERGHAVTVFDAAPLPSAAQRAFAPFGERLHVINGDVIDA CEEEEEECCCEEECCHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCEECH DAVAAAIGNGCDAVVMGAAITAGPERDASDPERILAVNLLAQVPILQAARRSGVRRVINL HHHHHHHCCCCCCEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSAASYGASGQRFAVLEETTPCEPVSLYAITKFTSERVAARLSDLWQTDVISVRLSAVFG HHHHCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHC PFERGGGVRDTPSPQALIAACCARSEPALLNEAGDKDWVYAVDVADAVCLLLEAEKPQQT CHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCHHH LYNISNEATFTAEAWGRAFASGRSGFTCRLAEPGETPTVPVFAPVRGRLSTMRLANEFGW HHCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCC RARFDCAGSAEHFGRWFDQYGRD EEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MHVLIFGGAGFVGLNTAQGLLERGHAVTVFDAAPLPSAAQRAFAPFGERLHVINGDVIDA CEEEEEECCCEEECCHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCEECH DAVAAAIGNGCDAVVMGAAITAGPERDASDPERILAVNLLAQVPILQAARRSGVRRVINL HHHHHHHCCCCCCEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSAASYGASGQRFAVLEETTPCEPVSLYAITKFTSERVAARLSDLWQTDVISVRLSAVFG HHHHCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHC PFERGGGVRDTPSPQALIAACCARSEPALLNEAGDKDWVYAVDVADAVCLLLEAEKPQQT CHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCHHH LYNISNEATFTAEAWGRAFASGRSGFTCRLAEPGETPTVPVFAPVRGRLSTMRLANEFGW HHCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCC RARFDCAGSAEHFGRWFDQYGRD EEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]