Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 146338816

GI number: 146338816

Start: 1875397

End: 1876356

Strand: Direct

Name: yiiP [C]

Synonym: BRADO1750

Alternate gene names: 146338816

Gene position: 1875397-1876356 (Clockwise)

Preceding gene: 146338814

Following gene: 146338819

Centisome position: 25.15

GC content: 66.46

Gene sequence:

>960_bases
ATGGCAGCGACCACGGATTCCAGAGTTGCCGTCTATGCTGCCTTGGCCGGCAACCTGCTCGTCGCCTGCACAAAGATCGC
GGCGGCGGTCTGGACCGGCAGTTCGGCGATGATGAGCGAAGCCATCCATTCGGTCGTGGACACCTTCAACGAGCTCCTGC
TGCTCTACGGCTTCCACCGCGCGAGCCGTCCGCCCGATCGCGGACATCCGCTCGGCCACGGCCGCGAGCTCTACTTCTGG
AGCTTCATCGTCGCGCTGCTGCTGTTCGCGCTCGGCGCGGGCGTCTCGCTGTACGAGGGCGTCGCGCACCTGATGCATCC
GGAGCCGATCGAGAATCCGACGGTGAACTACATCGTGCTCGGCCTGTCTTTCGTGTTCGAGGCCGGCTCCTGGTGGGTCG
CCGTGCGGCGCTTTCGCGCGGCGGCGCCGGACCTCTCCACCATCGAGGCGTTCCGGCGCAGCAAGGATCCGCCGGCCTTC
ATGGTCGTGTTCGAGGACAGCGCGGCGCTGATCGGAATCATGATCGCAGCCGCCGCGACCGCCGCAGCCGTGGGGTTCGA
CGAGCCGGCGTGGGATGGCATCGGATCGATCCTGATCGGGCTCTTGCTCGCGGTGACCTCAATGGTGCTGGCGCGGGAGA
GCAAGAGTCTCCTGATCGGGGAGCAAGCGGATCCCGAATTGGCGAGCTCGGTGCTCGAGATTGCGCGCGCGTCGGAGGCC
GTGCTGTCCGCCAATGGTCTGCTGACGGTGCAGCTGTCGCCGCAGCAGGTCGTCGTAGCGCTCAGCGTCGAATTCGCCGA
CGATCTCCGCGCCGATGATATCGAGCGTGCCGTCGTCACAATTGAGACGGAGTTGCGCGGTCGCCATCCCGAGATCGCGG
CGCTGTTCGTCAAGCCGCAGACTGGCGCACGCTATCGGGAGACGCGCGCGCGCCAGTTGCAAGGTTCTGCTCCTGCGTGA

Upstream 100 bases:

>100_bases
TTGCGCCTGCGCGATCCTGATCGTTCCCGGGACGCCGCGCAAGGGAACCGGGCCCGCCAGCCGGCGTTGCCCGGCGCATG
AACGATCAAGGCGGGGTGTC

Downstream 100 bases:

>100_bases
CGGCGGGTCAGCGGTAGGCGACATCGCTGCGGGCCGACGACAGCCGCACCAGCATGCCGATCTGATAGATCGCCGAGAGC
GCCACCAGGATGTAGACGAT

Product: putative cation-efflux pump

Products: NA

Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation Transporter Permease Component; Cation-Efflux Pump; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAATTDSRVAVYAALAGNLLVACTKIAAAVWTGSSAMMSEAIHSVVDTFNELLLLYGFHRASRPPDRGHPLGHGRELYFW
SFIVALLLFALGAGVSLYEGVAHLMHPEPIENPTVNYIVLGLSFVFEAGSWWVAVRRFRAAAPDLSTIEAFRRSKDPPAF
MVVFEDSAALIGIMIAAAATAAAVGFDEPAWDGIGSILIGLLLAVTSMVLARESKSLLIGEQADPELASSVLEIARASEA
VLSANGLLTVQLSPQQVVVALSVEFADDLRADDIERAVVTIETELRGRHPEIAALFVKPQTGARYRETRARQLQGSAPA

Sequences:

>Translated_319_residues
MAATTDSRVAVYAALAGNLLVACTKIAAAVWTGSSAMMSEAIHSVVDTFNELLLLYGFHRASRPPDRGHPLGHGRELYFW
SFIVALLLFALGAGVSLYEGVAHLMHPEPIENPTVNYIVLGLSFVFEAGSWWVAVRRFRAAAPDLSTIEAFRRSKDPPAF
MVVFEDSAALIGIMIAAAATAAAVGFDEPAWDGIGSILIGLLLAVTSMVLARESKSLLIGEQADPELASSVLEIARASEA
VLSANGLLTVQLSPQQVVVALSVEFADDLRADDIERAVVTIETELRGRHPEIAALFVKPQTGARYRETRARQLQGSAPA
>Mature_318_residues
AATTDSRVAVYAALAGNLLVACTKIAAAVWTGSSAMMSEAIHSVVDTFNELLLLYGFHRASRPPDRGHPLGHGRELYFWS
FIVALLLFALGAGVSLYEGVAHLMHPEPIENPTVNYIVLGLSFVFEAGSWWVAVRRFRAAAPDLSTIEAFRRSKDPPAFM
VVFEDSAALIGIMIAAAATAAAVGFDEPAWDGIGSILIGLLLAVTSMVLARESKSLLIGEQADPELASSVLEIARASEAV
LSANGLLTVQLSPQQVVVALSVEFADDLRADDIERAVVTIETELRGRHPEIAALFVKPQTGARYRETRARQLQGSAPA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI57164948, Length=257, Percent_Identity=33.4630350194552, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI115534117, Length=209, Percent_Identity=36.3636363636364, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24653143, Length=197, Percent_Identity=34.010152284264, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24653141, Length=197, Percent_Identity=34.010152284264, Blast_Score=121, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34124; Mature: 33992

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTDSRVAVYAALAGNLLVACTKIAAAVWTGSSAMMSEAIHSVVDTFNELLLLYGFHR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRPPDRGHPLGHGRELYFWSFIVALLLFALGAGVSLYEGVAHLMHPEPIENPTVNYIVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
GLSFVFEAGSWWVAVRRFRAAAPDLSTIEAFRRSKDPPAFMVVFEDSAALIGIMIAAAAT
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
AAAVGFDEPAWDGIGSILIGLLLAVTSMVLARESKSLLIGEQADPELASSVLEIARASEA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
VLSANGLLTVQLSPQQVVVALSVEFADDLRADDIERAVVTIETELRGRHPEIAALFVKPQ
HEECCCEEEEEECCCEEEEEEEEEHHHCCCCCCHHHEEEEEEHHHCCCCCCEEEEEEECC
TGARYRETRARQLQGSAPA
CCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AATTDSRVAVYAALAGNLLVACTKIAAAVWTGSSAMMSEAIHSVVDTFNELLLLYGFHR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRPPDRGHPLGHGRELYFWSFIVALLLFALGAGVSLYEGVAHLMHPEPIENPTVNYIVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
GLSFVFEAGSWWVAVRRFRAAAPDLSTIEAFRRSKDPPAFMVVFEDSAALIGIMIAAAAT
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
AAAVGFDEPAWDGIGSILIGLLLAVTSMVLARESKSLLIGEQADPELASSVLEIARASEA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
VLSANGLLTVQLSPQQVVVALSVEFADDLRADDIERAVVTIETELRGRHPEIAALFVKPQ
HEECCCEEEEEECCCEEEEEEEEEHHHCCCCCCHHHEEEEEEHHHCCCCCCEEEEEEECC
TGARYRETRARQLQGSAPA
CCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA