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The map label for this gene is hupF [H]

Identifier: 146338754

GI number: 146338754

Start: 1806106

End: 1806396

Strand: Direct

Name: hupF [H]

Synonym: BRADO1688

Alternate gene names: 146338754

Gene position: 1806106-1806396 (Clockwise)

Preceding gene: 146338753

Following gene: 146338755

Centisome position: 24.22

GC content: 65.98

Gene sequence:

>291_bases
ATGTGCCTGGGCCTGCCGATGACGATCATGGCGACCGATGGCGTCTCGGCGCTGTGCAGCTTCGACGGCGAGCAGCGCCG
CGTCTCGGTGCTGCTGTTGTCGAATCCGCCGGTCGGCGCAAAAGTCCTGGTCTATCTCGACAACGCGGTGCGCCTGCTCG
ATGACGAGGAGGCGCGGCTGATCGGCGACGCCCTTCGCGGCTTGCAAGCCGCGATGAGCGGCGAGAATTGCGACGATTTC
TTCGCCGACCTGATCGGCCGCGAGCCGCAGTTGCCGGAGCATTTGCGCTGA

Upstream 100 bases:

>100_bases
GGCCGGCGAGGCACGGCTGCTGACCAACGACATCGATCATCAAAGTTATGAGATGCGCGCGGAACCGGCCGAATAGCTGG
TTGCTGCGAGGGAGTTCACC

Downstream 100 bases:

>100_bases
GCCTTGCGCACCGGCCTCTGTCCGGTAGCCGACAACAAAATATCCAATTGGAAGGAAAGTTGTCGGACATCGTCTGCAAA
ACTGCTTTGCAGATGTCTTA

Product: hydrogenase expression/formation protein HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MCLGLPMTIMATDGVSALCSFDGEQRRVSVLLLSNPPVGAKVLVYLDNAVRLLDDEEARLIGDALRGLQAAMSGENCDDF
FADLIGREPQLPEHLR

Sequences:

>Translated_96_residues
MCLGLPMTIMATDGVSALCSFDGEQRRVSVLLLSNPPVGAKVLVYLDNAVRLLDDEEARLIGDALRGLQAAMSGENCDDF
FADLIGREPQLPEHLR
>Mature_96_residues
MCLGLPMTIMATDGVSALCSFDGEQRRVSVLLLSNPPVGAKVLVYLDNAVRLLDDEEARLIGDALRGLQAAMSGENCDDF
FADLIGREPQLPEHLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10416; Mature: 10416

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGLPMTIMATDGVSALCSFDGEQRRVSVLLLSNPPVGAKVLVYLDNAVRLLDDEEARL
CCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCHHEECCCCHHHH
IGDALRGLQAAMSGENCDDFFADLIGREPQLPEHLR
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCLGLPMTIMATDGVSALCSFDGEQRRVSVLLLSNPPVGAKVLVYLDNAVRLLDDEEARL
CCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCHHEECCCCHHHH
IGDALRGLQAAMSGENCDDFFADLIGREPQLPEHLR
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8230232; 8163174; 12597275 [H]