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The map label for this gene is rbcL [H]

Identifier: 146338726

GI number: 146338726

Start: 1777615

End: 1779075

Strand: Direct

Name: rbcL [H]

Synonym: BRADO1659

Alternate gene names: 146338726

Gene position: 1777615-1779075 (Clockwise)

Preceding gene: 146338725

Following gene: 146338727

Centisome position: 23.84

GC content: 64.41

Gene sequence:

>1461_bases
ATGAACGACCAATCGATCACCGTCCGCGGCAAGGATCGCTACAAGTCCGGCGTGATGGAATACAAGAAGATGGGCTATTG
GGAACCGTCCTATCAGCCCAATGACACCGACGTGATCGCGCTGTTCCGCGTCACTCCGCAGGACGGAGTCGACCCGGTCG
AGGCCTGTGCCGCGGTTGCCGGTGAATCCTCGACCGCGACCTGGACCGTGGTGTGGACCGACCGACTGACCGCCGCCGAG
AAGTATCGCGCCAAGTGCTACCGCGTCGAGCCGGTGCCGGGCTCGCCGGGCAGCTACTTCGCCTATATCGCCTACGATCT
CGATCTGTTCGAGCCCGGTTCGATCGCCAACCTCACGGCCTCGATCATCGGCAACGTGTTCGGTTTCAAGCCGCTGAAAG
CGCTGCGGCTGGAGGACATGCGGCTGCCGGTGGCCTATGTGAAGACCTTCCAGGGCCCGGCGACCGGCATCGTCGTCGAG
CGCGAGCGGCTCGACAAGTTCGGCCGTCCGCTGCTCGGCGCCACCGTCAAGCCGAAGCTCGGTCTCTCGGGACGCAACTA
CGGCCGCGTCGTCTATGAGGCGCTGAAGGGCGGTCTCGACTTCACCAAGGATGACGAGAACATCAACTCGCAGCCCTTCA
TGCATTGGCGCGAGCGCTTCCTGTACTGTATGGAAGCGGTCAACAAGGCGCAGGCGGCGACCGGCGAGATCAAGGGCACC
TATCTCAACGTCACCGCAGCGACGATGGAGGACATGTATGAGCGCGCCGAGTTCGCCAAGGAGCTCGGCTCGAACATCAT
CATGATCGACCTCGTTATCGGCTACACCGCGATCCAGTCGATGGCGAAATGGTCCCGCAAGAACGACATGATCCTGCATC
TGCATCGCGCGGGACATTCGACCTACACGCGGCAGCGCGCGCACGGTGTCTCGTTCCGCGTCATCGCCAAATGGATGCGG
CTCGCCGGCGTCGACCACATCCATGCCGGCACCGTGGTCGGCAAACTCGAAGGCGATCCGAACACCACGCGCGGCTATTA
CGACATCTGCCGCGAGGACTTCAACCCGATGCGGCTCGAGCACGGCGTGTTCTTCGACCAGCACTGGGCGAGCCTCAACA
AGCTGATGCCGGTGGCCTCGGGCGGCATCCATGCCGGCCAGATGCACCAGCTGCTCGACCTGCTCGGCGAGGACGTCGTG
CTGCAGTTCGGCGGCGGCACCATCGGCCATCCCCGCGGCATCGCCGCCGGCGCGACCGCCAACCGCGTCGCGCTGGAAGC
GATGATCCTCGCCCGCAACGAGGGCCGCGACTACGTCCACGAGGGTCCGGAGATTCTCGCCAAGGCGGCGATGACCTGCA
CGCCGCTGCGCGAGGCGCTAGAGATCTGGAAGGACGTCACCTTCAACTACGAATCGACGGACTCTCCGGACTTCGTCCCG
ACCGTCACCCCCGCGGCCTAA

Upstream 100 bases:

>100_bases
ATGGCCAAGCGCTATCGCTCCGGCGCGCTCGATCCGCGCGTCGGGGGAATGACCGAAGCTGCGTGACGTCAACGTCGATA
ACGAACATCAGGAGGAACAC

Downstream 100 bases:

>100_bases
ACCCCATTCGATTCGTCGCTGGGCGGGCCGGAGACCGGCTCGCGTGTCGCAGCGAAATCAGGAGACATTCCCATGCGCGT
GACCCAAGGCTGCTTTTCCT

Product: ribulose bisophosphate carboxylase

Products: NA

Alternate protein names: RuBisCO large subunit 2 [H]

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MNDQSITVRGKDRYKSGVMEYKKMGYWEPSYQPNDTDVIALFRVTPQDGVDPVEACAAVAGESSTATWTVVWTDRLTAAE
KYRAKCYRVEPVPGSPGSYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVE
RERLDKFGRPLLGATVKPKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNKAQAATGEIKGT
YLNVTAATMEDMYERAEFAKELGSNIIMIDLVIGYTAIQSMAKWSRKNDMILHLHRAGHSTYTRQRAHGVSFRVIAKWMR
LAGVDHIHAGTVVGKLEGDPNTTRGYYDICREDFNPMRLEHGVFFDQHWASLNKLMPVASGGIHAGQMHQLLDLLGEDVV
LQFGGGTIGHPRGIAAGATANRVALEAMILARNEGRDYVHEGPEILAKAAMTCTPLREALEIWKDVTFNYESTDSPDFVP
TVTPAA

Sequences:

>Translated_486_residues
MNDQSITVRGKDRYKSGVMEYKKMGYWEPSYQPNDTDVIALFRVTPQDGVDPVEACAAVAGESSTATWTVVWTDRLTAAE
KYRAKCYRVEPVPGSPGSYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVE
RERLDKFGRPLLGATVKPKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNKAQAATGEIKGT
YLNVTAATMEDMYERAEFAKELGSNIIMIDLVIGYTAIQSMAKWSRKNDMILHLHRAGHSTYTRQRAHGVSFRVIAKWMR
LAGVDHIHAGTVVGKLEGDPNTTRGYYDICREDFNPMRLEHGVFFDQHWASLNKLMPVASGGIHAGQMHQLLDLLGEDVV
LQFGGGTIGHPRGIAAGATANRVALEAMILARNEGRDYVHEGPEILAKAAMTCTPLREALEIWKDVTFNYESTDSPDFVP
TVTPAA
>Mature_486_residues
MNDQSITVRGKDRYKSGVMEYKKMGYWEPSYQPNDTDVIALFRVTPQDGVDPVEACAAVAGESSTATWTVVWTDRLTAAE
KYRAKCYRVEPVPGSPGSYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVE
RERLDKFGRPLLGATVKPKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNKAQAATGEIKGT
YLNVTAATMEDMYERAEFAKELGSNIIMIDLVIGYTAIQSMAKWSRKNDMILHLHRAGHSTYTRQRAHGVSFRVIAKWMR
LAGVDHIHAGTVVGKLEGDPNTTRGYYDICREDFNPMRLEHGVFFDQHWASLNKLMPVASGGIHAGQMHQLLDLLGEDVV
LQFGGGTIGHPRGIAAGATANRVALEAMILARNEGRDYVHEGPEILAKAAMTCTPLREALEIWKDVTFNYESTDSPDFVP
TVTPAA

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR020888
- InterPro:   IPR000685
- InterPro:   IPR017443
- InterPro:   IPR017444 [H]

Pfam domain/function: PF00016 RuBisCO_large; PF02788 RuBisCO_large_N [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 53965; Mature: 53965

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00157 RUBISCO_LARGE ; PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQSITVRGKDRYKSGVMEYKKMGYWEPSYQPNDTDVIALFRVTPQDGVDPVEACAAVA
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHC
GESSTATWTVVWTDRLTAAEKYRAKCYRVEPVPGSPGSYFAYIAYDLDLFEPGSIANLTA
CCCCCEEEEEEEECCHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHH
SIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKL
HHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCC
GLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNKAQAATGEIKGT
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
YLNVTAATMEDMYERAEFAKELGSNIIMIDLVIGYTAIQSMAKWSRKNDMILHLHRAGHS
EEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
TYTRQRAHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDICREDFNPMRLE
HHHHHHHCCCHHHHHHHHHHHCCCCCEECCEEEEEECCCCCCCCHHHHHHHCCCCCEEEC
HGVFFDQHWASLNKLMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPRGIAAGATA
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH
NRVALEAMILARNEGRDYVHEGPEILAKAAMTCTPLREALEIWKDVTFNYESTDSPDFVP
HHHHHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TVTPAA
CCCCCC
>Mature Secondary Structure
MNDQSITVRGKDRYKSGVMEYKKMGYWEPSYQPNDTDVIALFRVTPQDGVDPVEACAAVA
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHC
GESSTATWTVVWTDRLTAAEKYRAKCYRVEPVPGSPGSYFAYIAYDLDLFEPGSIANLTA
CCCCCEEEEEEEECCHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHH
SIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKL
HHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCC
GLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNKAQAATGEIKGT
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
YLNVTAATMEDMYERAEFAKELGSNIIMIDLVIGYTAIQSMAKWSRKNDMILHLHRAGHS
EEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
TYTRQRAHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDICREDFNPMRLE
HHHHHHHCCCHHHHHHHHHHHCCCCCEECCEEEEEECCCCCCCCHHHHHHHCCCCCEEEC
HGVFFDQHWASLNKLMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPRGIAAGATA
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH
NRVALEAMILARNEGRDYVHEGPEILAKAAMTCTPLREALEIWKDVTFNYESTDSPDFVP
HHHHHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TVTPAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA