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The map label for this gene is cycA

Identifier: 146338698

GI number: 146338698

Start: 1746273

End: 1746707

Strand: Direct

Name: cycA

Synonym: BRADO1630

Alternate gene names: NA

Gene position: 1746273-1746707 (Clockwise)

Preceding gene: 146338694

Following gene: 146338705

Centisome position: 23.42

GC content: 61.15

Gene sequence:

>435_bases
ATGCTGAAATCGGGTTTGGTTGCGGCGGTCGTGATTGCAACGTCGGCAGGCGCCGCATTCGCGCTGGACGGCGGCGACGC
TGCGAAAGGCGAGCAGGTCTTCAAGCAATGCATGACCTGCCACCGCATCGGACCCGATGCGAAGAATGCTGTGGGTCCGG
TTCTGACCGGTGTGGTCGGCCGCCCGACGGGGACCGCTCCGGGATTTGCCTATTCCGAGCTCAACAAGCACGCCGGCGAG
GCCGGGCTGGTCTGGACCGATGACAACATCTTCGAATACCTCGCCGACCCCAACGCCTTCCTGAAGAAATATCTCACCGA
GAAGGGCAAGGCGGACCAAGCCACCGGCTCGACCAAGATGGTGTTCAAGCTCGCCAACGAGCAGCAGCGCAAGGACGTCG
TCGCTTATCTTAAGACCTTCTCGGAGAAGAAGTGA

Upstream 100 bases:

>100_bases
TCACATTTGAATGAAGCGGGCATGACAAGAGCACATGACATTGTTACCTGTAAGGAGCCAGTCACATGGACTAACAAGAC
GGCACATCAGGAGGATGCAG

Downstream 100 bases:

>100_bases
GGGGAGGCGGACCGACGCTCAGGCTTGAGCGCCGATCACCGCACCATCTACACGCACCAGTGTCGTCCCGGCGAAAGCCG
GGACCCATACCGCGTGATGT

Product: cytochrome c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLKSGLVAAVVIATSAGAAFALDGGDAAKGEQVFKQCMTCHRIGPDAKNAVGPVLTGVVGRPTGTAPGFAYSELNKHAGE
AGLVWTDDNIFEYLADPNAFLKKYLTEKGKADQATGSTKMVFKLANEQQRKDVVAYLKTFSEKK

Sequences:

>Translated_144_residues
MLKSGLVAAVVIATSAGAAFALDGGDAAKGEQVFKQCMTCHRIGPDAKNAVGPVLTGVVGRPTGTAPGFAYSELNKHAGE
AGLVWTDDNIFEYLADPNAFLKKYLTEKGKADQATGSTKMVFKLANEQQRKDVVAYLKTFSEKK
>Mature_144_residues
MLKSGLVAAVVIATSAGAAFALDGGDAAKGEQVFKQCMTCHRIGPDAKNAVGPVLTGVVGRPTGTAPGFAYSELNKHAGE
AGLVWTDDNIFEYLADPNAFLKKYLTEKGKADQATGSTKMVFKLANEQQRKDVVAYLKTFSEKK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=116, Percent_Identity=37.0689655172414, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17539604, Length=124, Percent_Identity=39.5161290322581, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=126, Percent_Identity=37.3015873015873, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322508, Length=120, Percent_Identity=35, Blast_Score=70, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6320796, Length=115, Percent_Identity=34.7826086956522, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137228, Length=117, Percent_Identity=41.025641025641, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137204, Length=120, Percent_Identity=40, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15243; Mature: 15243

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSGLVAAVVIATSAGAAFALDGGDAAKGEQVFKQCMTCHRIGPDAKNAVGPVLTGVVG
CCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
RPTGTAPGFAYSELNKHAGEAGLVWTDDNIFEYLADPNAFLKKYLTEKGKADQATGSTKM
CCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
VFKLANEQQRKDVVAYLKTFSEKK
HHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKSGLVAAVVIATSAGAAFALDGGDAAKGEQVFKQCMTCHRIGPDAKNAVGPVLTGVVG
CCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
RPTGTAPGFAYSELNKHAGEAGLVWTDDNIFEYLADPNAFLKKYLTEKGKADQATGSTKM
CCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
VFKLANEQQRKDVVAYLKTFSEKK
HHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA