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The map label for this gene is crtB [H]

Identifier: 146338679

GI number: 146338679

Start: 1725528

End: 1726568

Strand: Direct

Name: crtB [H]

Synonym: BRADO1611

Alternate gene names: 146338679

Gene position: 1725528-1726568 (Clockwise)

Preceding gene: 146338678

Following gene: 146338680

Centisome position: 23.14

GC content: 70.89

Gene sequence:

>1041_bases
ATGAGCTGGGAAGACGATATCGCGATCTGTCGACGGATGTTGCGGGGCGGATCGAAGACGTTCTTCGCCGCCTCGAAGGT
GCTGCCCCGCGCGGTCGGCGATCCCGCCATCGCGCTCTACGCGTTCTGCCGCGAGGCCGATGACGCGATCGATGGTCCGG
GCCGCAAGGTCGATGCGGTGGAGATGCTGCATGAGCGGCTCGAGCGCATCTACGAGGGGCGCCCGGACGACAGCCCCGTC
GACCGCGCTCTTGCCGGTGCCGTCGCCGCGTTCGCCATTCCGCGCGCGCTGCCAGAGGCGCTGCTCGAAGGTCTCGCCTG
GGACGCGCAGGGCCGCCGCTACGACACATTGAGCGATGTGCTCGCCTATGCCGTGCGCGTCGCCGGCACCGTGGGCGTGA
TGATGTCGCTGCTGATGCACCGGCGCGATGCCGAGACCGTCGGCCGGGCCTGCGATCTCGGCATCGCCATGCAGCTCACC
AACATCGCCCGCGACGTCGGCGAGGATGCGCGCAATGGCCGGCTGTACCTGCCAAGGCAATGGCTGCGGGAGACTGGGCT
CGATGTCGAGACATGGCGGGCTGCCCCGTTCTTCGACGACCGGATCGCGCGCGTCACCGCGCGGCTGCTGGCGGTCGCCG
ACGTGTTCTATGCGCGCGCCGCAGCCGGCATCGCCGATCTGCCGTGGAACTGCCGGCCCGGCATTCACGCCGCGCGCCTG
ATCTATGCCGAGATCGGCCGGGAGGTCGCACGCGCCGAGTTCGATTCGTTGTCGCGGCGTGCCGTGGTGTCGATGCCGCG
CAAGCTGCGGCTGCTCGGCAAGGCGGCGCTGGTGTCGTTCGCCCAGCCGCAACCGTCGCTGGCGCCCGCGCGCCCCGAGG
CGCGGGTGCTGATCGACGCCGTCATCGCCGCTGATGCGCATCGCCCGCACGCGCTGGCGCCGCCCCGGCGGACTATGCAC
GACCGCGCGCTCTGGGTGATCGATCTGTTCGAGCGGCTGGAGCGGCGCGACCAGCTGTCGCGCTCGGCGCGGACGTCCTG
A

Upstream 100 bases:

>100_bases
TCGGGGCCGGCACGCATCCCGGCGCCGGTCTGCCGGGCGTGTTGTCCTCCGCGCGCGTGCTCGATGATCTCGTACCCGCG
CCGCATGAGCTGGAGCGCCG

Downstream 100 bases:

>100_bases
CAGGCACGACAAGCGAGGCGACATGAGCGAGATGGGCGGCCTGCTCGAATTCGTCGTCGTCGCGCTCTGCGTGCTCGGCT
GGCTCGTGCTCGAATGGCAG

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSWEDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAVEMLHERLERIYEGRPDDSPV
DRALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLSDVLAYAVRVAGTVGVMMSLLMHRRDAETVGRACDLGIAMQLT
NIARDVGEDARNGRLYLPRQWLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHAARL
IYAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAALVSFAQPQPSLAPARPEARVLIDAVIAADAHRPHALAPPRRTMH
DRALWVIDLFERLERRDQLSRSARTS

Sequences:

>Translated_346_residues
MSWEDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAVEMLHERLERIYEGRPDDSPV
DRALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLSDVLAYAVRVAGTVGVMMSLLMHRRDAETVGRACDLGIAMQLT
NIARDVGEDARNGRLYLPRQWLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHAARL
IYAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAALVSFAQPQPSLAPARPEARVLIDAVIAADAHRPHALAPPRRTMH
DRALWVIDLFERLERRDQLSRSARTS
>Mature_345_residues
SWEDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAVEMLHERLERIYEGRPDDSPVD
RALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLSDVLAYAVRVAGTVGVMMSLLMHRRDAETVGRACDLGIAMQLTN
IARDVGEDARNGRLYLPRQWLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHAARLI
YAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAALVSFAQPQPSLAPARPEARVLIDAVIAADAHRPHALAPPRRTMHD
RALWVIDLFERLERRDQLSRSARTS

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 38323; Mature: 38191

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWEDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
EMLHERLERIYEGRPDDSPVDRALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLSDV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LAYAVRVAGTVGVMMSLLMHRRDAETVGRACDLGIAMQLTNIARDVGEDARNGRLYLPRQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCEEECCHH
WLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHAARL
HHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IYAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAALVSFAQPQPSLAPARPEARVLIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VIAADAHRPHALAPPRRTMHDRALWVIDLFERLERRDQLSRSARTS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SWEDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
EMLHERLERIYEGRPDDSPVDRALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLSDV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LAYAVRVAGTVGVMMSLLMHRRDAETVGRACDLGIAMQLTNIARDVGEDARNGRLYLPRQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCEEECCHH
WLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHAARL
HHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IYAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAALVSFAQPQPSLAPARPEARVLIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VIAADAHRPHALAPPRRTMHDRALWVIDLFERLERRDQLSRSARTS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]