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The map label for this gene is yjiA [H]

Identifier: 146338617

GI number: 146338617

Start: 1653811

End: 1654812

Strand: Direct

Name: yjiA [H]

Synonym: BRADO1545

Alternate gene names: 146338617

Gene position: 1653811-1654812 (Clockwise)

Preceding gene: 146338616

Following gene: 146338619

Centisome position: 22.18

GC content: 69.26

Gene sequence:

>1002_bases
ATGACGATCGATTTCTTCGTTCTTACCGGCTTTCTCGGCTCCGGCAAGACGACGCTGCTGCGCGACGTGCTGAGCGCGGA
GACGGCGTCGGACACCGCCGTGATCGTGAACGAGGCCGGCGAGGTCGGGCTCGACGGCGTCCTGTTGCGCGAGAGCGGCG
ACGACGTGCCGATGGCGATGCTGTCGAACGGCTGCGTTTGCTGCCAAATCGGCAGCGACCTCGCCTTCACCATCGATCGC
CTGATCATGGCGCCGCGCCCAGAAGGGGTTCCGCTGCTGCGCCGGATCATCCTGGAGACGTCGGGCCTGTCGATGCCCGG
CCCGGTGCTGCGCCAGCTCGCGACGCTCGCCGAGCACCGCATGCGCGTCGCCGTCATCGCGACCTACGATCTCACGCGCG
GCCTCGCCGTCGCGACCTTCGAGGAGGCGGCCGCGCAATGGGCCGCGGCGCACCGCATCGTCGCGACCAAGGCGGATCTA
GCACCCGGCGCGTTGGCCGAGGCGGCGGTTGCGATCGCGCAGCTCAATCCGGTGGCCGAGGCGGTCGTCGTTGCGGATCG
CGCCGCAGCCGTATCCGCCGCCTTCGCGCCGTTGTCATCAGTACCGCCGCTGCGCGAGATCGTGCCCGCTCTCGCCGTCG
CGCATCCGCGCCTTGCGCTCTGCGTCGTCCGCCCGCTCGCCGACATCGCCTATGCCGATCTCGCGAGCTGGCTCGACAAT
GTCGCAGGCCGGCTCGGCGAGCGTCTTCTACGCATCAAGGGGCTCGTCAAAGTCTGCGAGGCGCCGCGGCCGCTGCTGGT
CGAAAGCGTCGGCACGATGTTCTCGCCGCCGCGGCAACTGACGGCCAACAATCCGCCGCCGCCCTTCATTGTCGTCATCG
CGCGCGACATCGACTGCGCCGAGCTGGAGCAGGTCGAGCCGAAGGGACTGTTCAAGTTCTCCTGGCGCGAGCCGGAGAGC
AGGGAAGCACCGCGCGCCATTCGCGCCGAGTGGGTGACCTGA

Upstream 100 bases:

>100_bases
AGGAGCTGCTCGCCGACGTGCGCGAGCTCGTGAAGGCGAGCTGGGAGAGCGACGTGCCGGAGAAATATGTGACCAAGGAC
GCCGCGGCGCCATGAGCGCC

Downstream 100 bases:

>100_bases
ACGCTGCGAACAGTAGCGCCGTCCCAAGCCACCTGCCGTCAGTCCGGGGCAATCGTGCACACGCTTGCGTGCGCGCGATT
GAACCCGGAATCCCGAGGTT

Product: putative cobalamin synthesis protein cobW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTIDFFVLTGFLGSGKTTLLRDVLSAETASDTAVIVNEAGEVGLDGVLLRESGDDVPMAMLSNGCVCCQIGSDLAFTIDR
LIMAPRPEGVPLLRRIILETSGLSMPGPVLRQLATLAEHRMRVAVIATYDLTRGLAVATFEEAAAQWAAAHRIVATKADL
APGALAEAAVAIAQLNPVAEAVVVADRAAAVSAAFAPLSSVPPLREIVPALAVAHPRLALCVVRPLADIAYADLASWLDN
VAGRLGERLLRIKGLVKVCEAPRPLLVESVGTMFSPPRQLTANNPPPPFIVVIARDIDCAELEQVEPKGLFKFSWREPES
REAPRAIRAEWVT

Sequences:

>Translated_333_residues
MTIDFFVLTGFLGSGKTTLLRDVLSAETASDTAVIVNEAGEVGLDGVLLRESGDDVPMAMLSNGCVCCQIGSDLAFTIDR
LIMAPRPEGVPLLRRIILETSGLSMPGPVLRQLATLAEHRMRVAVIATYDLTRGLAVATFEEAAAQWAAAHRIVATKADL
APGALAEAAVAIAQLNPVAEAVVVADRAAAVSAAFAPLSSVPPLREIVPALAVAHPRLALCVVRPLADIAYADLASWLDN
VAGRLGERLLRIKGLVKVCEAPRPLLVESVGTMFSPPRQLTANNPPPPFIVVIARDIDCAELEQVEPKGLFKFSWREPES
REAPRAIRAEWVT
>Mature_332_residues
TIDFFVLTGFLGSGKTTLLRDVLSAETASDTAVIVNEAGEVGLDGVLLRESGDDVPMAMLSNGCVCCQIGSDLAFTIDRL
IMAPRPEGVPLLRRIILETSGLSMPGPVLRQLATLAEHRMRVAVIATYDLTRGLAVATFEEAAAQWAAAHRIVATKADLA
PGALAEAAVAIAQLNPVAEAVVVADRAAAVSAAFAPLSSVPPLREIVPALAVAHPRLALCVVRPLADIAYADLASWLDNV
AGRLGERLLRIKGLVKVCEAPRPLLVESVGTMFSPPRQLTANNPPPPFIVVIARDIDCAELEQVEPKGLFKFSWREPESR
EAPRAIRAEWVT

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=333, Percent_Identity=25.2252252252252, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI146231952, Length=333, Percent_Identity=25.2252252252252, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI126722884, Length=333, Percent_Identity=24.9249249249249, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI223941779, Length=318, Percent_Identity=25.1572327044025, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI33469141, Length=333, Percent_Identity=24.6246246246246, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI87082430, Length=278, Percent_Identity=26.6187050359712, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788499, Length=158, Percent_Identity=35.4430379746835, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35430; Mature: 35298

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDFFVLTGFLGSGKTTLLRDVLSAETASDTAVIVNEAGEVGLDGVLLRESGDDVPMAM
CEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHH
LSNGCVCCQIGSDLAFTIDRLIMAPRPEGVPLLRRIILETSGLSMPGPVLRQLATLAEHR
HCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
MRVAVIATYDLTRGLAVATFEEAAAQWAAAHRIVATKADLAPGALAEAAVAIAQLNPVAE
EEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCHHHH
AVVVADRAAAVSAAFAPLSSVPPLREIVPALAVAHPRLALCVVRPLADIAYADLASWLDN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGRLGERLLRIKGLVKVCEAPRPLLVESVGTMFSPPRQLTANNPPPPFIVVIARDIDCA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHH
ELEQVEPKGLFKFSWREPESREAPRAIRAEWVT
HHHHCCCCCCEEEECCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
TIDFFVLTGFLGSGKTTLLRDVLSAETASDTAVIVNEAGEVGLDGVLLRESGDDVPMAM
EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHH
LSNGCVCCQIGSDLAFTIDRLIMAPRPEGVPLLRRIILETSGLSMPGPVLRQLATLAEHR
HCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
MRVAVIATYDLTRGLAVATFEEAAAQWAAAHRIVATKADLAPGALAEAAVAIAQLNPVAE
EEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCHHHH
AVVVADRAAAVSAAFAPLSSVPPLREIVPALAVAHPRLALCVVRPLADIAYADLASWLDN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGRLGERLLRIKGLVKVCEAPRPLLVESVGTMFSPPRQLTANNPPPPFIVVIARDIDCA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHH
ELEQVEPKGLFKFSWREPESREAPRAIRAEWVT
HHHHCCCCCCEEEECCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]