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The map label for this gene is dcrA [H]

Identifier: 146338591

GI number: 146338591

Start: 1622222

End: 1624297

Strand: Direct

Name: dcrA [H]

Synonym: BRADO1518

Alternate gene names: 146338591

Gene position: 1622222-1624297 (Clockwise)

Preceding gene: 146338589

Following gene: 146338597

Centisome position: 21.76

GC content: 69.03

Gene sequence:

>2076_bases
ATGAAGATCGGTCGCTTGTTTGCTGTCTCGATGCTGTCGGTCACGGTCCTGGCGGTCGTGCCGGCGGCGCAGAACGTGAC
GGCGCAGTACCGGACCTATGTCGACCGGACCGAGGCGATCAAGCTGGTCGAAGCCTATGGCGCCGTGCTGTCGTTCGGGC
AGCAGGTGGTCGGACACCGTGCGCCCTATATCAGCCCGCTGTTCCAGGAGCAGCCCGCATCGGACACGCAACTGGCGGCG
ATCGCGAAAATCAGGCAGGTGTCGGATGCGAGCTTCGAGAAGGCCAAGATCGCGGCCGCCGATCTGAGCAACGGCAAATC
CATCGCCGATGGCCTGGTGCAGGCGGGTGCCAAGCTCAACGACATTCGTGGTGCGATCGATCCGAACCTGTCGCGCCCGC
TCGGCGCGCGCGATCAGAGCGTGGTCAAGAGCTTCCTGCCGGGCGTCGGCCAGGTCGCCGGAATGATCGATCCGATTCTG
GATGGCCTGGCGGACCAGGTGGCCGCGACCGATGCGTCATTGATCACGCTGCTCAACGTCGCCCGCACCGCGCAGGACCT
GCGCATCGCGGCCGGCGGCCGCGCGGCGACACTGTCGCCGGCGATCAGCGCCCGCCGCCAGATCACGGGGGCCGAGAAGG
CCATCATGGATCGCGCGCTCGGCCGGATCGAGACCAACCGCGACCGGCTGCAGTCCGGCGTGCAGCAGCTGGGCAATCCG
CCGCGCCTGGCGGCCGCGCTGAAGGAGGCCAACGAAGCCTATTTCGGCCGCGCCAATGCGGTGGTCGACAAGGAGATGGC
GGTCGGGCAGGGCGACGCCAACTACTCCATCAATGCCGATCAGCTGGCCGAGGTCGTCGTGCCCGCGATCGAGAAATTCT
TCGTGCTGCGCGACTCCACGATCGCCGAAGCGCGTGACCGCGCCAGAACGGCGCGCGACAGTGCTCTGACGATGCTGATC
ATCGGCGTCGCCGTGGTCGTCGCGCTGCTCGCCCTGCTGATCGGCGTCACCATGCTGCTGCGCCGCCGCGTCATCGCGCC
GGTGATCGCGCTCACCGGCGTGATCGGCGAGATGGCGAAGGGGAACGACGAGGTCGCGATCCCCGCCAGCGGCCGCGACG
ACGAGATCAGCGCGATGGCGGGCTCGCTGCAGACCTTCAAGGAGGCGCTGCTGGAGAAGAAGGCCGCCGAGCGCGCGGCT
TCCGCGGAAGCGCAGGCCAAGATCGAGCGCGGCCAGCGCGTCGAGACCTTCACCCGCGCCTTCGAGGCTGCGATCGGCGA
GGTGATCGAGGTGGTCTCCTCCGCGACCTCGGATCTCGAGCAGGCGGCCGACGCGCTCACGACGACCGCCGGACGCTCGC
TGGAGCTCGCCACCGTGGTGGCAAGCGCCTCCGGCGAAGCGACGACCAACGTGCATTCGGTCGCCGCCGCGACCGAGGAG
ATGACGACCTCGGTCGATGAGATCAGCCGCCAGGTGAAGGTCTCCGCGCAGATCGCCAGCGAGGCGATGGAGCAGGCACG
GCGCACGAACGACCGCGTCGGCGAGCTCGCCAAGGCGGCGGCGCGGATCGGCGACGTCGTCGAGCTGATCAACGCGATTG
CCGGGCAGACCAATCTGCTGGCGCTCAACGCCACCATCGAGGCGGCGCGCGCCGGCGAGGCCGGCAAGGGCTTTGCGGTC
GTCGCCTCCGAGGTCAAGGCGCTGGCGGAACAGACCGCGAAGGCCACCGGCGAGATCGGCCAGCAGATCGGCAGCATCCA
GGGCGCCACGCAGGAATCCGTGGGCGCGATCAAGGAGATCGGCGAGACCATCGCCCGCATGTCGGAGATCGCCGCCGCGA
TCGCCTCGTCGGTCGAGGAGCAGAGCTCGGCCACGCGCGAAATCTCCCGCAACGTGCAGCAGGCCGCGCATGGCACCCAG
GAGGTCTCGGCCAACATCTCCAGCGTGCGCGAGGGCGCCAACGAGACCGGATCGGCGTCCTCCAACGTGCTCGCCGCGGC
CAAGTCGCTGAGCGGCCAGAGCAGCCGCCTGAAGCAGGAGGTCGCGCGCTTCCTGGATTCGGTGCGGGCGGCGTGA

Upstream 100 bases:

>100_bases
CCCGCCCGGCCCCGTAAGATTGCGGGGTTGGTTCCACTTAAGCAAGGCTTAGGCCCGATCGGCCATATTTATCCAAAATC
AATCTGGATGGACGCCCACG

Downstream 100 bases:

>100_bases
GGTCGTCGGCGCCGCGGCGGCAGGCCTACTTGCCCTTCTCGATCCTGGTCACCGTGTAGCCCGCGGCGTCCTCCTGCGCC
TCGAACCTGACCTTGTCGCC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MKIGRLFAVSMLSVTVLAVVPAAQNVTAQYRTYVDRTEAIKLVEAYGAVLSFGQQVVGHRAPYISPLFQEQPASDTQLAA
IAKIRQVSDASFEKAKIAAADLSNGKSIADGLVQAGAKLNDIRGAIDPNLSRPLGARDQSVVKSFLPGVGQVAGMIDPIL
DGLADQVAATDASLITLLNVARTAQDLRIAAGGRAATLSPAISARRQITGAEKAIMDRALGRIETNRDRLQSGVQQLGNP
PRLAAALKEANEAYFGRANAVVDKEMAVGQGDANYSINADQLAEVVVPAIEKFFVLRDSTIAEARDRARTARDSALTMLI
IGVAVVVALLALLIGVTMLLRRRVIAPVIALTGVIGEMAKGNDEVAIPASGRDDEISAMAGSLQTFKEALLEKKAAERAA
SAEAQAKIERGQRVETFTRAFEAAIGEVIEVVSSATSDLEQAADALTTTAGRSLELATVVASASGEATTNVHSVAAATEE
MTTSVDEISRQVKVSAQIASEAMEQARRTNDRVGELAKAAARIGDVVELINAIAGQTNLLALNATIEAARAGEAGKGFAV
VASEVKALAEQTAKATGEIGQQIGSIQGATQESVGAIKEIGETIARMSEIAAAIASSVEEQSSATREISRNVQQAAHGTQ
EVSANISSVREGANETGSASSNVLAAAKSLSGQSSRLKQEVARFLDSVRAA

Sequences:

>Translated_691_residues
MKIGRLFAVSMLSVTVLAVVPAAQNVTAQYRTYVDRTEAIKLVEAYGAVLSFGQQVVGHRAPYISPLFQEQPASDTQLAA
IAKIRQVSDASFEKAKIAAADLSNGKSIADGLVQAGAKLNDIRGAIDPNLSRPLGARDQSVVKSFLPGVGQVAGMIDPIL
DGLADQVAATDASLITLLNVARTAQDLRIAAGGRAATLSPAISARRQITGAEKAIMDRALGRIETNRDRLQSGVQQLGNP
PRLAAALKEANEAYFGRANAVVDKEMAVGQGDANYSINADQLAEVVVPAIEKFFVLRDSTIAEARDRARTARDSALTMLI
IGVAVVVALLALLIGVTMLLRRRVIAPVIALTGVIGEMAKGNDEVAIPASGRDDEISAMAGSLQTFKEALLEKKAAERAA
SAEAQAKIERGQRVETFTRAFEAAIGEVIEVVSSATSDLEQAADALTTTAGRSLELATVVASASGEATTNVHSVAAATEE
MTTSVDEISRQVKVSAQIASEAMEQARRTNDRVGELAKAAARIGDVVELINAIAGQTNLLALNATIEAARAGEAGKGFAV
VASEVKALAEQTAKATGEIGQQIGSIQGATQESVGAIKEIGETIARMSEIAAAIASSVEEQSSATREISRNVQQAAHGTQ
EVSANISSVREGANETGSASSNVLAAAKSLSGQSSRLKQEVARFLDSVRAA
>Mature_691_residues
MKIGRLFAVSMLSVTVLAVVPAAQNVTAQYRTYVDRTEAIKLVEAYGAVLSFGQQVVGHRAPYISPLFQEQPASDTQLAA
IAKIRQVSDASFEKAKIAAADLSNGKSIADGLVQAGAKLNDIRGAIDPNLSRPLGARDQSVVKSFLPGVGQVAGMIDPIL
DGLADQVAATDASLITLLNVARTAQDLRIAAGGRAATLSPAISARRQITGAEKAIMDRALGRIETNRDRLQSGVQQLGNP
PRLAAALKEANEAYFGRANAVVDKEMAVGQGDANYSINADQLAEVVVPAIEKFFVLRDSTIAEARDRARTARDSALTMLI
IGVAVVVALLALLIGVTMLLRRRVIAPVIALTGVIGEMAKGNDEVAIPASGRDDEISAMAGSLQTFKEALLEKKAAERAA
SAEAQAKIERGQRVETFTRAFEAAIGEVIEVVSSATSDLEQAADALTTTAGRSLELATVVASASGEATTNVHSVAAATEE
MTTSVDEISRQVKVSAQIASEAMEQARRTNDRVGELAKAAARIGDVVELINAIAGQTNLLALNATIEAARAGEAGKGFAV
VASEVKALAEQTAKATGEIGQQIGSIQGATQESVGAIKEIGETIARMSEIAAAIASSVEEQSSATREISRNVQQAAHGTQ
EVSANISSVREGANETGSASSNVLAAAKSLSGQSSRLKQEVARFLDSVRAA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=399, Percent_Identity=27.8195488721804, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1787690, Length=385, Percent_Identity=30.6493506493506, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI2367378, Length=427, Percent_Identity=26.463700234192, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=30.4075235109718, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=182, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 71863; Mature: 71863

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGRLFAVSMLSVTVLAVVPAAQNVTAQYRTYVDRTEAIKLVEAYGAVLSFGQQVVGHR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APYISPLFQEQPASDTQLAAIAKIRQVSDASFEKAKIAAADLSNGKSIADGLVQAGAKLN
CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
DIRGAIDPNLSRPLGARDQSVVKSFLPGVGQVAGMIDPILDGLADQVAATDASLITLLNV
HHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTAQDLRIAAGGRAATLSPAISARRQITGAEKAIMDRALGRIETNRDRLQSGVQQLGNP
HHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PRLAAALKEANEAYFGRANAVVDKEMAVGQGDANYSINADQLAEVVVPAIEKFFVLRDST
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
IAEARDRARTARDSALTMLIIGVAVVVALLALLIGVTMLLRRRVIAPVIALTGVIGEMAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNDEVAIPASGRDDEISAMAGSLQTFKEALLEKKAAERAASAEAQAKIERGQRVETFTRA
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FEAAIGEVIEVVSSATSDLEQAADALTTTAGRSLELATVVASASGEATTNVHSVAAATEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHH
MTTSVDEISRQVKVSAQIASEAMEQARRTNDRVGELAKAAARIGDVVELINAIAGQTNLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALNATIEAARAGEAGKGFAVVASEVKALAEQTAKATGEIGQQIGSIQGATQESVGAIKEI
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GETIARMSEIAAAIASSVEEQSSATREISRNVQQAAHGTQEVSANISSVREGANETGSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
SNVLAAAKSLSGQSSRLKQEVARFLDSVRAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGRLFAVSMLSVTVLAVVPAAQNVTAQYRTYVDRTEAIKLVEAYGAVLSFGQQVVGHR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APYISPLFQEQPASDTQLAAIAKIRQVSDASFEKAKIAAADLSNGKSIADGLVQAGAKLN
CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
DIRGAIDPNLSRPLGARDQSVVKSFLPGVGQVAGMIDPILDGLADQVAATDASLITLLNV
HHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTAQDLRIAAGGRAATLSPAISARRQITGAEKAIMDRALGRIETNRDRLQSGVQQLGNP
HHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PRLAAALKEANEAYFGRANAVVDKEMAVGQGDANYSINADQLAEVVVPAIEKFFVLRDST
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
IAEARDRARTARDSALTMLIIGVAVVVALLALLIGVTMLLRRRVIAPVIALTGVIGEMAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNDEVAIPASGRDDEISAMAGSLQTFKEALLEKKAAERAASAEAQAKIERGQRVETFTRA
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FEAAIGEVIEVVSSATSDLEQAADALTTTAGRSLELATVVASASGEATTNVHSVAAATEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHH
MTTSVDEISRQVKVSAQIASEAMEQARRTNDRVGELAKAAARIGDVVELINAIAGQTNLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALNATIEAARAGEAGKGFAVVASEVKALAEQTAKATGEIGQQIGSIQGATQESVGAIKEI
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GETIARMSEIAAAIASSVEEQSSATREISRNVQQAAHGTQEVSANISSVREGANETGSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
SNVLAAAKSLSGQSSRLKQEVARFLDSVRAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]