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The map label for this gene is kaiC

Identifier: 146338558

GI number: 146338558

Start: 1586062

End: 1587819

Strand: Direct

Name: kaiC

Synonym: BRADO1478

Alternate gene names: NA

Gene position: 1586062-1587819 (Clockwise)

Preceding gene: 146338557

Following gene: 146338559

Centisome position: 21.27

GC content: 64.05

Gene sequence:

>1758_bases
ATGAAAACGAGTGTGCGTCCTCGAATCGTGACGCGGGATCTCCCTGTGATCGCAAAATCCCCGACCGGGATCGACGGCCT
GGACGAGGTCACGTTCGGCGGCCTGCCGCGGGGACGCCCGACGCTGTTGTGCGGCGCCGCAGGCTGCGGCAAGACGCTGT
TCGCGATGACTTTTCTCTACAACGGCGCCGTTGCCTATGACGAGCCCGGCGTTTTCATCGCGTTCGAGGAGCAGCCCGAG
GATCTGATCAAGAATGTCGGCTCGCTGAGCTATGACATCGAGCGGCTGATCGAGCAGAAGAAGATCGTCGTCGATCACAT
CCACCTCGATCGCAACGAGATCGAGGAGGCGGGGGACTACGATCTCGACGGGCTGTTCATCCGCATCGGCTTCGCGATCG
ATTCCATCGGCGCCAAGCGCGTCGTGATCGACACGATCGAGACGCTGTTCGGCGGTCTCGACAATCAGGCCGTGCTGCGC
TCCGAGCTGCGGCGGCTGTTCGAGTGGCTGAAGAGCAAGGGCGTCACCGCGATCATCACCGGCGAGCGCGGTGGCGGTAC
GCTGACCCGTTATGGCCTCGAGGAATACGTCGCCGATTGCGTGATCCTGCTCGACAACCGCGTTCATGATCAGTTGTCGA
CGCGGCGACTGCGCGTTGTGAAGTACCGCGGCACGGCGCACGGCACCAACGAATATCCCTTCATCATCGACCAGGAAGGC
ATCACGGTGATGCCGATCACCTCGTCGGGTCTCGCCCATGATGCCTGGACCGAGCGGGTCTCGACGGGCATCGCCGATCT
CGACGACATGCTGGAAGGGCGTGGCTACTACAAGGGATCGAGCATCCTGATCTCCGGCATGGCTGGGTCCGGAAAGTCGA
CGATGTCGGCGCATTTCGCCAATTCGATCTGCGCGGGCGGACAGCGCTGCATCTATTTCGCGCTGGAAGAATCGCCGCAG
CAGATCATCCGCAACATGCGGTCGGTCGGCCTGGACCTGCAGCAATGGGTCGATCGCGGCCTGCTGCGCTTCTCCGCGCG
CCGTCCCAATCTGTACGGGCTGGAAACGCATCTCGCCGCGATGCACCGCGAAGTGAAGGAATTCGATCCTGCCGCCGTGG
TCGTCGATCCGATCTCGTCGCTGATGGGCGCGGGTCTCGCCGGTGACGTTCACTCGATGACGCTGCGGCTCATCGATTTC
CTGAAGGCGCGCGGTGTCACCGCGCTGTTCACCAATCTGGGCGGTGGCACCGCCGAGACGGTGACCACGGAGATGCAGAT
CTCCTCGCTCACCGACACTTGGCTGCTGCTCTACAACCGCGAGAGCAATGGCGAGCACAATCGCCAGCTCTATCTGTTGA
AGTCGCGCGGCATGGCGCATTCCAATCAGGTTCGCGAGTTCCTGATGAGCGCCGACGGCATCGCGCTGCGCGAGGTCTAT
GTCGGTCCCGAAGGTGTCCTCACGGGGTCGGCGCGGCTCGCCCAGGAGGCCAGGGATCGCGCGGATCGGCTCTCGCGCAT
GCAGGAGGTCGAGCGCCGGACGCGGGACGTCGAGCGCCGCCGCAGAGAAATCGAGCAGCAGATCGAAACGCTGAAGGCTC
AGCTTGCGAGCGAGGAGGGGGAAATGGAGCTTCTGAACCTGGAAAGCAGCGCGCGCGACGAGCAGCGCTCGGCGGATCGC
ATCGCCCTGGCGCAGAGCCGCTCGGCCAAGCGGCCAGCCGGCGGCGCCGCCTCGACACCGATGGCCTCGCGCAAATGA

Upstream 100 bases:

>100_bases
AAAATCTTTTTCCGAAGCCGGGAACCTTTTTCCTTCCGAAGCGTCGATTCACGCCTTGGTGTGGCCAGAGCGTGTTCGCT
CGACGGCGGGGGGAAGATCG

Downstream 100 bases:

>100_bases
CGGCCGCAGCGATGGAACAGGATGGCTACAATCTCCGGCTCTATGTCGCGGGCCAGACGCCCAAATCGGTGGCGGCTCTC
GCCAACCTCAAGAAGCTGTG

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKTSVRPRIVTRDLPVIAKSPTGIDGLDEVTFGGLPRGRPTLLCGAAGCGKTLFAMTFLYNGAVAYDEPGVFIAFEEQPE
DLIKNVGSLSYDIERLIEQKKIVVDHIHLDRNEIEEAGDYDLDGLFIRIGFAIDSIGAKRVVIDTIETLFGGLDNQAVLR
SELRRLFEWLKSKGVTAIITGERGGGTLTRYGLEEYVADCVILLDNRVHDQLSTRRLRVVKYRGTAHGTNEYPFIIDQEG
ITVMPITSSGLAHDAWTERVSTGIADLDDMLEGRGYYKGSSILISGMAGSGKSTMSAHFANSICAGGQRCIYFALEESPQ
QIIRNMRSVGLDLQQWVDRGLLRFSARRPNLYGLETHLAAMHREVKEFDPAAVVVDPISSLMGAGLAGDVHSMTLRLIDF
LKARGVTALFTNLGGGTAETVTTEMQISSLTDTWLLLYNRESNGEHNRQLYLLKSRGMAHSNQVREFLMSADGIALREVY
VGPEGVLTGSARLAQEARDRADRLSRMQEVERRTRDVERRRREIEQQIETLKAQLASEEGEMELLNLESSARDEQRSADR
IALAQSRSAKRPAGGAASTPMASRK

Sequences:

>Translated_585_residues
MKTSVRPRIVTRDLPVIAKSPTGIDGLDEVTFGGLPRGRPTLLCGAAGCGKTLFAMTFLYNGAVAYDEPGVFIAFEEQPE
DLIKNVGSLSYDIERLIEQKKIVVDHIHLDRNEIEEAGDYDLDGLFIRIGFAIDSIGAKRVVIDTIETLFGGLDNQAVLR
SELRRLFEWLKSKGVTAIITGERGGGTLTRYGLEEYVADCVILLDNRVHDQLSTRRLRVVKYRGTAHGTNEYPFIIDQEG
ITVMPITSSGLAHDAWTERVSTGIADLDDMLEGRGYYKGSSILISGMAGSGKSTMSAHFANSICAGGQRCIYFALEESPQ
QIIRNMRSVGLDLQQWVDRGLLRFSARRPNLYGLETHLAAMHREVKEFDPAAVVVDPISSLMGAGLAGDVHSMTLRLIDF
LKARGVTALFTNLGGGTAETVTTEMQISSLTDTWLLLYNRESNGEHNRQLYLLKSRGMAHSNQVREFLMSADGIALREVY
VGPEGVLTGSARLAQEARDRADRLSRMQEVERRTRDVERRRREIEQQIETLKAQLASEEGEMELLNLESSARDEQRSADR
IALAQSRSAKRPAGGAASTPMASRK
>Mature_585_residues
MKTSVRPRIVTRDLPVIAKSPTGIDGLDEVTFGGLPRGRPTLLCGAAGCGKTLFAMTFLYNGAVAYDEPGVFIAFEEQPE
DLIKNVGSLSYDIERLIEQKKIVVDHIHLDRNEIEEAGDYDLDGLFIRIGFAIDSIGAKRVVIDTIETLFGGLDNQAVLR
SELRRLFEWLKSKGVTAIITGERGGGTLTRYGLEEYVADCVILLDNRVHDQLSTRRLRVVKYRGTAHGTNEYPFIIDQEG
ITVMPITSSGLAHDAWTERVSTGIADLDDMLEGRGYYKGSSILISGMAGSGKSTMSAHFANSICAGGQRCIYFALEESPQ
QIIRNMRSVGLDLQQWVDRGLLRFSARRPNLYGLETHLAAMHREVKEFDPAAVVVDPISSLMGAGLAGDVHSMTLRLIDF
LKARGVTALFTNLGGGTAETVTTEMQISSLTDTWLLLYNRESNGEHNRQLYLLKSRGMAHSNQVREFLMSADGIALREVY
VGPEGVLTGSARLAQEARDRADRLSRMQEVERRTRDVERRRREIEQQIETLKAQLASEEGEMELLNLESSARDEQRSADR
IALAQSRSAKRPAGGAASTPMASRK

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 64630; Mature: 64630

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSVRPRIVTRDLPVIAKSPTGIDGLDEVTFGGLPRGRPTLLCGAAGCGKTLFAMTFLY
CCCCCCCEEEECCCCEEECCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
NGAVAYDEPGVFIAFEEQPEDLIKNVGSLSYDIERLIEQKKIVVDHIHLDRNEIEEAGDY
CCEEEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHEEHEEECCHHHHHHCCCC
DLDGLFIRIGFAIDSIGAKRVVIDTIETLFGGLDNQAVLRSELRRLFEWLKSKGVTAIIT
CCCEEEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
GERGGGTLTRYGLEEYVADCVILLDNRVHDQLSTRRLRVVKYRGTAHGTNEYPFIIDQEG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCC
ITVMPITSSGLAHDAWTERVSTGIADLDDMLEGRGYYKGSSILISGMAGSGKSTMSAHFA
EEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHH
NSICAGGQRCIYFALEESPQQIIRNMRSVGLDLQQWVDRGLLRFSARRPNLYGLETHLAA
HHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
MHREVKEFDPAAVVVDPISSLMGAGLAGDVHSMTLRLIDFLKARGVTALFTNLGGGTAET
HHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHH
VTTEMQISSLTDTWLLLYNRESNGEHNRQLYLLKSRGMAHSNQVREFLMSADGIALREVY
EEEEEEHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEE
VGPEGVLTGSARLAQEARDRADRLSRMQEVERRTRDVERRRREIEQQIETLKAQLASEEG
ECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EMELLNLESSARDEQRSADRIALAQSRSAKRPAGGAASTPMASRK
CEEEEECCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTSVRPRIVTRDLPVIAKSPTGIDGLDEVTFGGLPRGRPTLLCGAAGCGKTLFAMTFLY
CCCCCCCEEEECCCCEEECCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
NGAVAYDEPGVFIAFEEQPEDLIKNVGSLSYDIERLIEQKKIVVDHIHLDRNEIEEAGDY
CCEEEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHEEHEEECCHHHHHHCCCC
DLDGLFIRIGFAIDSIGAKRVVIDTIETLFGGLDNQAVLRSELRRLFEWLKSKGVTAIIT
CCCEEEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
GERGGGTLTRYGLEEYVADCVILLDNRVHDQLSTRRLRVVKYRGTAHGTNEYPFIIDQEG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCC
ITVMPITSSGLAHDAWTERVSTGIADLDDMLEGRGYYKGSSILISGMAGSGKSTMSAHFA
EEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHH
NSICAGGQRCIYFALEESPQQIIRNMRSVGLDLQQWVDRGLLRFSARRPNLYGLETHLAA
HHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
MHREVKEFDPAAVVVDPISSLMGAGLAGDVHSMTLRLIDFLKARGVTALFTNLGGGTAET
HHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHH
VTTEMQISSLTDTWLLLYNRESNGEHNRQLYLLKSRGMAHSNQVREFLMSADGIALREVY
EEEEEEHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEE
VGPEGVLTGSARLAQEARDRADRLSRMQEVERRTRDVERRRREIEQQIETLKAQLASEEG
ECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EMELLNLESSARDEQRSADRIALAQSRSAKRPAGGAASTPMASRK
CEEEEECCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]