| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cheB [H]
Identifier: 146338556
GI number: 146338556
Start: 1583825
End: 1585021
Strand: Direct
Name: cheB [H]
Synonym: BRADO1476
Alternate gene names: 146338556
Gene position: 1583825-1585021 (Clockwise)
Preceding gene: 146338555
Following gene: 146338557
Centisome position: 21.24
GC content: 68.09
Gene sequence:
>1197_bases ATGAGCGTCGCGTTGGCCAGTTCTTCGATTCCAAGTTCGACCAGGCAGGAACCCCTCAGGGTGATGGTCGTGGACGACTC TGTCGTCATCCGCGGCATGATATCGCGCTGGATCAGCTCTGAGCCGGACATGGTCGTGGCGGCGTCGTTGCGGACCGGCC TCGAAGCGGTCAATCAGATCGACCGCGTCAACCCCGATGTCGCCGTGCTCGACATCGAGATGCCCGAGCTCGATGGTATC GCCGCGCTGCCGAAGCTGCTTGCGAAGAAAAAGAACCTCGCTGTGATCATGGCCTCGACGCTGACCCGCCGCAACGCGGA GATCAGCTTCAAGGCGCTGTCGCTCGGCGCGGCCGACTACATCCCGAAGCCCGAGAGCACGCGCGAAGCATCAGCCGCCG AAAATTTCCACTACGACCTGATCCAGAAGATCCGCAATCTCGGCGCCAAGGCGCGCCGTGCGGCTCCCGTGGCCTACGCT CCCGCGGCGGCTCCCGCCGCTCCGCACGTGCAGGAATTGCGGCCCGCGCCGGCGATGCGTCCGGCCGCGGCACCGACGCC GGTCCCGGCCGTTCCGGCCGCGGCCCTGGCGCGCCGCGCCTTCAGCTCACAGATGCCGAAGGTGCTGTTGATCGGCTCGT CGACCGGCGGCCCGCAGGCGCTGATGTCGGTCGTCACCGAGCTCGGCGCAGTGATCGACCGCTTCCCGGTGTTGATCACC CAGCACATGCCGCCGACCTTCACCACCATTCTCGCCGAGCATCTGGCGCGCTCGAGCCGCAGGCCGGCGCATGAGGCCGT CGATGGCGAGGTCATCAAGCCCGGCCAGATCTATCTCGCGCCCGGCGGCCGCCACATGCGCGTCGCACGCCACGGCGCCG AAGCCGTGATCGCGCTCGACAACGGCCCGCCCGTCAACTTCTGCAAGCCGGCCGTGGATCCGCTGTTCACCTCGGCCGTC GAGATCTGGCAGGGTGCGACGCTCGCCGTGATCCTCACCGGCATGGGCTCCGACGGCATGCGCGGCGGCAAGGACATCGT CGCGGCCGGCGGCAGCGTCATCGCGCAGGACGAGGCCACCAGCGTGGTCTGGGGCATGCCGGGCGCGGCCGCCAATGCCG GGATCTGCGCGGCCATCCTTCCCTTGAATCAGATCGCTCCGAAGCTCGTGCGTCTGTTTGCTGGAGACCGTTCGTGA
Upstream 100 bases:
>100_bases ATTCCAGGAAGTCGGGCTGATCTGAACCCCCGACCGGTTCGGATAGTCCGTGCTTGTCCGGGCTTGCCGTCGTCCTGTGC CTCTGTCCTGTTGGTGAACT
Downstream 100 bases:
>100_bases CACCCCTGGACTATGAGTTCTTGCGTAAGCTCCTGAAGGAGCGGTCCGGTCTCGACCTATCTGCCGACAAGCAATATCTG GTCGAGAGCCGGCTGTTGCC
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSVALASSSIPSSTRQEPLRVMVVDDSVVIRGMISRWISSEPDMVVAASLRTGLEAVNQIDRVNPDVAVLDIEMPELDGI AALPKLLAKKKNLAVIMASTLTRRNAEISFKALSLGAADYIPKPESTREASAAENFHYDLIQKIRNLGAKARRAAPVAYA PAAAPAAPHVQELRPAPAMRPAAAPTPVPAVPAAALARRAFSSQMPKVLLIGSSTGGPQALMSVVTELGAVIDRFPVLIT QHMPPTFTTILAEHLARSSRRPAHEAVDGEVIKPGQIYLAPGGRHMRVARHGAEAVIALDNGPPVNFCKPAVDPLFTSAV EIWQGATLAVILTGMGSDGMRGGKDIVAAGGSVIAQDEATSVVWGMPGAAANAGICAAILPLNQIAPKLVRLFAGDRS
Sequences:
>Translated_398_residues MSVALASSSIPSSTRQEPLRVMVVDDSVVIRGMISRWISSEPDMVVAASLRTGLEAVNQIDRVNPDVAVLDIEMPELDGI AALPKLLAKKKNLAVIMASTLTRRNAEISFKALSLGAADYIPKPESTREASAAENFHYDLIQKIRNLGAKARRAAPVAYA PAAAPAAPHVQELRPAPAMRPAAAPTPVPAVPAAALARRAFSSQMPKVLLIGSSTGGPQALMSVVTELGAVIDRFPVLIT QHMPPTFTTILAEHLARSSRRPAHEAVDGEVIKPGQIYLAPGGRHMRVARHGAEAVIALDNGPPVNFCKPAVDPLFTSAV EIWQGATLAVILTGMGSDGMRGGKDIVAAGGSVIAQDEATSVVWGMPGAAANAGICAAILPLNQIAPKLVRLFAGDRS >Mature_397_residues SVALASSSIPSSTRQEPLRVMVVDDSVVIRGMISRWISSEPDMVVAASLRTGLEAVNQIDRVNPDVAVLDIEMPELDGIA ALPKLLAKKKNLAVIMASTLTRRNAEISFKALSLGAADYIPKPESTREASAAENFHYDLIQKIRNLGAKARRAAPVAYAP AAAPAAPHVQELRPAPAMRPAAAPTPVPAVPAAALARRAFSSQMPKVLLIGSSTGGPQALMSVVTELGAVIDRFPVLITQ HMPPTFTTILAEHLARSSRRPAHEAVDGEVIKPGQIYLAPGGRHMRVARHGAEAVIALDNGPPVNFCKPAVDPLFTSAVE IWQGATLAVILTGMGSDGMRGGKDIVAAGGSVIAQDEATSVVWGMPGAAANAGICAAILPLNQIAPKLVRLFAGDRS
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=373, Percent_Identity=36.7292225201072, Blast_Score=210, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 41646; Mature: 41515
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVALASSSIPSSTRQEPLRVMVVDDSVVIRGMISRWISSEPDMVVAASLRTGLEAVNQI CCEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH DRVNPDVAVLDIEMPELDGIAALPKLLAKKKNLAVIMASTLTRRNAEISFKALSLGAADY HHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEEECCCHHC IPKPESTREASAAENFHYDLIQKIRNLGAKARRAAPVAYAPAAAPAAPHVQELRPAPAMR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCCHHHCCCCCCCC PAAAPTPVPAVPAAALARRAFSSQMPKVLLIGSSTGGPQALMSVVTELGAVIDRFPVLIT CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC QHMPPTFTTILAEHLARSSRRPAHEAVDGEVIKPGQIYLAPGGRHMRVARHGAEAVIALD CCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCEEEECCCCCEEEEEECCCCEEEEEC NGPPVNFCKPAVDPLFTSAVEIWQGATLAVILTGMGSDGMRGGKDIVAAGGSVIAQDEAT CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCCEEECCCCC SVVWGMPGAAANAGICAAILPLNQIAPKLVRLFAGDRS EEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVALASSSIPSSTRQEPLRVMVVDDSVVIRGMISRWISSEPDMVVAASLRTGLEAVNQI CEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH DRVNPDVAVLDIEMPELDGIAALPKLLAKKKNLAVIMASTLTRRNAEISFKALSLGAADY HHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEEECCCHHC IPKPESTREASAAENFHYDLIQKIRNLGAKARRAAPVAYAPAAAPAAPHVQELRPAPAMR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCCHHHCCCCCCCC PAAAPTPVPAVPAAALARRAFSSQMPKVLLIGSSTGGPQALMSVVTELGAVIDRFPVLIT CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC QHMPPTFTTILAEHLARSSRRPAHEAVDGEVIKPGQIYLAPGGRHMRVARHGAEAVIALD CCCCHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCEEEECCCCCEEEEEECCCCEEEEEC NGPPVNFCKPAVDPLFTSAVEIWQGATLAVILTGMGSDGMRGGKDIVAAGGSVIAQDEAT CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCCEEECCCCC SVVWGMPGAAANAGICAAILPLNQIAPKLVRLFAGDRS EEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA