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The map label for this gene is trkD

Identifier: 146338546

GI number: 146338546

Start: 1572517

End: 1574394

Strand: Direct

Name: trkD

Synonym: BRADO1466

Alternate gene names: 146338546

Gene position: 1572517-1574394 (Clockwise)

Preceding gene: 146338545

Following gene: 146338547

Centisome position: 21.09

GC content: 65.65

Gene sequence:

>1878_bases
ATGAACGCAAACCTTGCGCATCAACCGCCGCAAGGCCGGCTCAGCCTGCTTGCACTGTCGGCGCTTGGCATCGTGTTCGG
CGACATCGGCACGAGTCCGCTGTATACGTTCAAGACGATCCTCGGCACCGGCGGGCAGCCGACAGGCGCCGCCGCCGTGC
TCGGCGCGCTGTCGCTGGTGATCTGGACGCTGTTCATCATCACGACTGTGAAATACGTGATGTTCGCGATGCGCGTCGAC
AATGACGGCGAGGGCGGCATCCTGGCGCTGATGGCATTGCTCGGCGTGAAGCGCCAGCGTCGGCCGACGATCGTCGCGCT
CGGCCTGTTCGGCGCGGCGCTGATCTATGGCGACGGCGCGATCACGCCGGCCATTTCCGTGCTCTCGGCGCTCGAAGGCC
TGAACATGGCGGCGCCCGCGCTGCAGCCTTATGTCGTGCCGGCGGCCGTCGTGATTCTGCTCGCGCTGTTCGCGATCCAG
TCGCGCGGCACGGCCTCGATCGGGCGTCTGTTCGGGCCGGTCATGCTGCTGTGGTTCGTGACCATCGCGGTGTTGGGACT
GGTTGGGATCGCCAGGCACCCAACGGTGTTCGCGGCGATCAATCCGAGCTACGGATTGTCTTATCTGGTGTCCAACGGCG
CCACCGGCTTCTTGGTGCTCGGCTCGGTGTTCCTGTGCGTGACCGGCGCGGAGGCGCTCTACGCCGACATGGGGCATTTC
GGCGCCGGACCGATCAAGCTCGCCTGGTTTGCGGTCGTCTTTCCCAGCCTGATCATCAACTACGCCGGCCAGGCGGCGCT
GGTGATCGACGGCGCGCCGACGGATGGCAACATCTTCTTCAGGCTCTGCCCGGACGGGCTGCTGCTGCCGCTGATCGGGC
TCGCGACCTTGGCGACCATCATCGCCAGCCAGTCGGTCATTACCGGTGCATTCTCCATGACCCGGCAGGCGATCCAGCTC
GGCTGGATGCCGCGGCTCGCGATCAAGCAGACCTCGTCGGAAGGCTACGGCCAGATCTATGTCGGGGCGGTCAACTGGCT
CTTGATGCTCGTCACTGTGAGCCTGACGATCGGGTTCGGCAAGTCCGACAATCTGGCGTCGGCCTATGGCATCGCGGTGT
CGCTGACGATGCTGATGACGTCGGCGCTGCTGTTCATCGCCATGCGCGAGATCTGGCAGTGGAGTCTGCTTGCGGCCGGC
GCGGTGGCGGGCGTCTTCCTGACCATCGACAGCGCATTCTTCCTGGCCAATCTGACCAAGATCGCCGAGGGCGGCTACGT
GCCGCTGCTGCTGGCGACCAGCGTCTATGGCCTGATGTGGATCTGGCACCGGGGGGCTGCGGCCGTGGCCGAACGCATGC
GCGAGCGGCTGATCCCGGTGGCGCAGTTCATGGCCGACATCGCCGAGAAGAAGGTCCCCAGGGTCCCCGGCACGGCGGTG
TTCCTGACCCGGACGGAGCGCGGCGCGCCGCCGGTGATGCTCTGGCACGTCAAGCACAACCGCGCGCTACATGAGCATCT
GCTGGTGCTGCGGGTGGAGGTGATCTCGATTCCCTGGGTCGCCCCGGATGACCGGCTGAAGATCGAGGAGCTCGCGCCGA
ATGTCTGGCGTGCCGAGGCGACATTCGGCTTCATGGAGCGGCCTCACATTCCCGAATTGCTCAAGGCCAGCAAGGCGCGC
GGCTGCCGCATCGATCTCGACGATATCACCTACTATGTCGGGCACGAAACGGTGACCGCGCGCGACGATGGCAAAGGCCT
GCCGGCGTGGCAGGAGCAATTGTTCGCCGCCATGGAGCGCAACTCGCTCCACGTCAGCGACTTCTTCAGCCTGCCACGCG
ACAGCGTCGTGGAGATCGGCCGGCAGGTGGCGATTTGA

Upstream 100 bases:

>100_bases
TCGCAACGCGCAATGATCGATTCTATGATAGGGGCCCGCGAAGCAGGACGAGCGCCATTCGCTGACATCGGGGGTGACAT
TGAACGACGACAAGGCTTCG

Downstream 100 bases:

>100_bases
TCGCAGCTGAGCGCTGACGCTATGCTCGCGATTGCTGTGGCTGACGAACGACGGCGGATCGACTCACTTGGGGACCGGGG
GCTGTGCTCGGCGCGTGCGA

Product: KUP family potassium transport system low affinity

Products: K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MNANLAHQPPQGRLSLLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLVIWTLFIITTVKYVMFAMRVD
NDGEGGILALMALLGVKRQRRPTIVALGLFGAALIYGDGAITPAISVLSALEGLNMAAPALQPYVVPAAVVILLALFAIQ
SRGTASIGRLFGPVMLLWFVTIAVLGLVGIARHPTVFAAINPSYGLSYLVSNGATGFLVLGSVFLCVTGAEALYADMGHF
GAGPIKLAWFAVVFPSLIINYAGQAALVIDGAPTDGNIFFRLCPDGLLLPLIGLATLATIIASQSVITGAFSMTRQAIQL
GWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFGKSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAG
AVAGVFLTIDSAFFLANLTKIAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAV
FLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKIEELAPNVWRAEATFGFMERPHIPELLKASKAR
GCRIDLDDITYYVGHETVTARDDGKGLPAWQEQLFAAMERNSLHVSDFFSLPRDSVVEIGRQVAI

Sequences:

>Translated_625_residues
MNANLAHQPPQGRLSLLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLVIWTLFIITTVKYVMFAMRVD
NDGEGGILALMALLGVKRQRRPTIVALGLFGAALIYGDGAITPAISVLSALEGLNMAAPALQPYVVPAAVVILLALFAIQ
SRGTASIGRLFGPVMLLWFVTIAVLGLVGIARHPTVFAAINPSYGLSYLVSNGATGFLVLGSVFLCVTGAEALYADMGHF
GAGPIKLAWFAVVFPSLIINYAGQAALVIDGAPTDGNIFFRLCPDGLLLPLIGLATLATIIASQSVITGAFSMTRQAIQL
GWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFGKSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAG
AVAGVFLTIDSAFFLANLTKIAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAV
FLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKIEELAPNVWRAEATFGFMERPHIPELLKASKAR
GCRIDLDDITYYVGHETVTARDDGKGLPAWQEQLFAAMERNSLHVSDFFSLPRDSVVEIGRQVAI
>Mature_625_residues
MNANLAHQPPQGRLSLLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLVIWTLFIITTVKYVMFAMRVD
NDGEGGILALMALLGVKRQRRPTIVALGLFGAALIYGDGAITPAISVLSALEGLNMAAPALQPYVVPAAVVILLALFAIQ
SRGTASIGRLFGPVMLLWFVTIAVLGLVGIARHPTVFAAINPSYGLSYLVSNGATGFLVLGSVFLCVTGAEALYADMGHF
GAGPIKLAWFAVVFPSLIINYAGQAALVIDGAPTDGNIFFRLCPDGLLLPLIGLATLATIIASQSVITGAFSMTRQAIQL
GWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFGKSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAG
AVAGVFLTIDSAFFLANLTKIAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAV
FLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKIEELAPNVWRAEATFGFMERPHIPELLKASKAR
GCRIDLDDITYYVGHETVTARDDGKGLPAWQEQLFAAMERNSLHVSDFFSLPRDSVVEIGRQVAI

Specific function: Transport of potassium into the cell

COG id: COG3158

COG function: function code P; K+ transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family

Homologues:

Organism=Escherichia coli, GI48994960, Length=622, Percent_Identity=41.1575562700965, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KUP1_BRASO (A4YN81)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001203594.1
- STRING:   A4YN81
- GeneID:   5120204
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO1466
- eggNOG:   COG3158
- HOGENOM:   HBG351154
- OMA:   TYYIGHE
- ProtClustDB:   CLSK929606
- BioCyc:   BSP376:BRADO1466-MONOMER
- HAMAP:   MF_01522
- InterPro:   IPR003855
- InterPro:   IPR023051

Pfam domain/function: PF02705 K_trans

EC number: NA

Molecular weight: Translated: 66989; Mature: 66989

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12910234)-; HASH(0x1812c1b4)-; HASH(0x17ff4060)-; HASH(0x18d40298)-; HASH(0x18abdce0)-; HASH(0x18a5c08c)-; HASH(0x18d50000)-; HASH(0x17e03cd8)-; HASH(0x18d3d9d8)-; HASH(0x188d0878)-; HASH(0x17f5f068)-; HASH(0x17355bb8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANLAHQPPQGRLSLLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IWTLFIITTVKYVMFAMRVDNDGEGGILALMALLGVKRQRRPTIVALGLFGAALIYGDGA
HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCC
ITPAISVLSALEGLNMAAPALQPYVVPAAVVILLALFAIQSRGTASIGRLFGPVMLLWFV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TIAVLGLVGIARHPTVFAAINPSYGLSYLVSNGATGFLVLGSVFLCVTGAEALYADMGHF
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCC
GAGPIKLAWFAVVFPSLIINYAGQAALVIDGAPTDGNIFFRLCPDGLLLPLIGLATLATI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH
IASQSVITGAFSMTRQAIQLGWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHEECC
KSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAGAVAGVFLTIDSAFFLANLTK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAV
HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKIEELAPNVWRAEA
EEEECCCCCCCEEEEEECCCHHHHHHHHHHEEEHEECCCCCCCCCEEHHHHCCCCEEHHH
TFGFMERPHIPELLKASKARGCRIDLDDITYYVGHETVTARDDGKGLPAWQEQLFAAMER
HHCCCCCCCCHHHHHHHCCCCCEEEHHHCEEEECCCEEEECCCCCCCCHHHHHHHHHHHC
NSLHVSDFFSLPRDSVVEIGRQVAI
CCCCHHHHHCCCHHHHHHHHHHCCH
>Mature Secondary Structure
MNANLAHQPPQGRLSLLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IWTLFIITTVKYVMFAMRVDNDGEGGILALMALLGVKRQRRPTIVALGLFGAALIYGDGA
HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCC
ITPAISVLSALEGLNMAAPALQPYVVPAAVVILLALFAIQSRGTASIGRLFGPVMLLWFV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TIAVLGLVGIARHPTVFAAINPSYGLSYLVSNGATGFLVLGSVFLCVTGAEALYADMGHF
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCC
GAGPIKLAWFAVVFPSLIINYAGQAALVIDGAPTDGNIFFRLCPDGLLLPLIGLATLATI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH
IASQSVITGAFSMTRQAIQLGWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHEECC
KSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAGAVAGVFLTIDSAFFLANLTK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAV
HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKIEELAPNVWRAEA
EEEECCCCCCCEEEEEECCCHHHHHHHHHHEEEHEECCCCCCCCCEEHHHHCCCCEEHHH
TFGFMERPHIPELLKASKARGCRIDLDDITYYVGHETVTARDDGKGLPAWQEQLFAAMER
HHCCCCCCCCHHHHHHHCCCCCEEEHHHCEEEECCCEEEECCCCCCCCHHHHHHHHHHHC
NSLHVSDFFSLPRDSVVEIGRQVAI
CCCCHHHHHCCCHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA