| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338509
Identifier: 146338509
GI number: 146338509
Start: 1525317
End: 1526852
Strand: Direct
Name: 146338509
Synonym: BRADO1427
Alternate gene names: NA
Gene position: 1525317-1526852 (Clockwise)
Preceding gene: 146338508
Following gene: 146338513
Centisome position: 20.46
GC content: 67.58
Gene sequence:
>1536_bases TTGGTAGTTGGCCTGGCCCTGCTGTGCTGCAGCTCGCTCGCATATGCCGACGAGAGTCCGCCGCTCGAGCGCGGCACCGC GATCCTGGAGCCGTCAGCGCTGCGCGCGCTCGACAGCGGCCCGTTTGGTCTCGGCCGCATGCTCGCAAAGGCGGGCGATG CGCCGCTGACCGACGCCGCGCTGTTCGCGCTGCCGTCGATGCAGCCCGTACGTAAGGGTCTGGAGGCCGAGTTCGACCGC TACGTCGAGGCGCACAATGCGACGCTGCCGAACGAGAGCATCGGCGTCGGCAATGCCTATGCCTTCCAGCTGTTCGACCG CGCCATGCTGGACTCGCCCGACGCCCGCTTCCTGCTGGCCGGCGTGGTGAACCGCATGGACCGCGCCTTCGTCGATCCCG AGCATTGCGGCGAGGTGCGGCTGTTGTATCGGCTGACGCGGACAACGCCGCCCGAGGCCAGGAACGGCGAGGTGGCCTCG CCACGGCTGCCGATGACCTTGAACATCGTGCTCACGGCGCGCAGCGACGCAGAGGCGAAGAGCAACATGCCGAGTTGCGC CGACATCGCCAAACGCTGGCTTGCGACATCGGATCTGCAACTGACCGGTCCTGAGCTGGCTGCGAAGCTGACCGCGCCGG ACGGGCCGCTGGCGCTGATCAGGCCGGAGAACATCCACCGCATCGAGACCAATCTGCAGATCGCGCATGCGCCGAAATCG GCGATCCGCGACTTCCGCACCGACTACATGATGAAGGTGTTCGACTATCAGGCCGCGAGCCGGACTTTCGAGGAGGCGGT GCTCGAGGATCAAATCGATCGCGACCGGCTGCTGGCGGACGCCGCGCTGGCCGGTGAGTTCAAGGCCTGGCTGCTCGATC CCGTGCATCTCGGCGAGCTCGATCGCGGCATGGCCGTCATCCCCGACAAGTTCCTCGCCAAGGTCGCTGTCGCGCCGACG CCGACAGGCTTCGTCAATTCCGACATGCTGCCGGCCTATGGGCTGGTGCAGAGCGAGGCGGGCGGGGCAGGCGTCGTGTT CAGCGAGGCCGACGTGGTCGGAGCGCTGGAGAAGGCGGCCGCGCAGGGCGTCGCCTTGCAGAACATCCAGTCGGTCGCGG GCTTCGAGCGCCGCCTCAACGATTCCAGCTGCGGCGGCTGCCATCAGACCCGCGGCATCGGCGGCTTCCATTTCCCCGGC GTCGACTGGATGGCGGAGAAGCCGTCCAATACGGTCGTGGTGCCCGGCTCGCCGCATTTCTTCGGCGACCAGGTCCGCCG CCGCGACATCCTCACCGCTTTTGCCGAGGGCCGAACCCCGGACTTTTCGCGCGGCTTCGCCAGTCGCCCGCAGCTGCGCG GCAGCGATGAGTTGTCAGGCACCGTCTACAATGACGGCTGGGGCGGGCATTGCTATGCGAACCGCGACGGCGCCGACAAC GACAAGAGCTTCTCGCGCTGGACCTGCGCGGCAAACCTATCCTGTCAGACCGGTCCGGCGACGCGGTTCGGCATGTGCTT CATCGCGACGCGCTAG
Upstream 100 bases:
>100_bases TCGGCTATGTTCGGCGCCTAGCAAACCGGCGCGCGGCGGCGAGGATGATGGGGTCGGCTCGCGCGGTCTGGTTCGGAAGA GGAGGCGCGTCGTGCGACAG
Downstream 100 bases:
>100_bases CTGCTCAGGCCACGGCGCCGCGGGCACGCAAGCCGCGGATGGCCTGCTCGTCGAAGCCGGCGCCGCGCAGGATCTCGTCG CTGTGCTCGCCGACGCCGGG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MVVGLALLCCSSLAYADESPPLERGTAILEPSALRALDSGPFGLGRMLAKAGDAPLTDAALFALPSMQPVRKGLEAEFDR YVEAHNATLPNESIGVGNAYAFQLFDRAMLDSPDARFLLAGVVNRMDRAFVDPEHCGEVRLLYRLTRTTPPEARNGEVAS PRLPMTLNIVLTARSDAEAKSNMPSCADIAKRWLATSDLQLTGPELAAKLTAPDGPLALIRPENIHRIETNLQIAHAPKS AIRDFRTDYMMKVFDYQAASRTFEEAVLEDQIDRDRLLADAALAGEFKAWLLDPVHLGELDRGMAVIPDKFLAKVAVAPT PTGFVNSDMLPAYGLVQSEAGGAGVVFSEADVVGALEKAAAQGVALQNIQSVAGFERRLNDSSCGGCHQTRGIGGFHFPG VDWMAEKPSNTVVVPGSPHFFGDQVRRRDILTAFAEGRTPDFSRGFASRPQLRGSDELSGTVYNDGWGGHCYANRDGADN DKSFSRWTCAANLSCQTGPATRFGMCFIATR
Sequences:
>Translated_511_residues MVVGLALLCCSSLAYADESPPLERGTAILEPSALRALDSGPFGLGRMLAKAGDAPLTDAALFALPSMQPVRKGLEAEFDR YVEAHNATLPNESIGVGNAYAFQLFDRAMLDSPDARFLLAGVVNRMDRAFVDPEHCGEVRLLYRLTRTTPPEARNGEVAS PRLPMTLNIVLTARSDAEAKSNMPSCADIAKRWLATSDLQLTGPELAAKLTAPDGPLALIRPENIHRIETNLQIAHAPKS AIRDFRTDYMMKVFDYQAASRTFEEAVLEDQIDRDRLLADAALAGEFKAWLLDPVHLGELDRGMAVIPDKFLAKVAVAPT PTGFVNSDMLPAYGLVQSEAGGAGVVFSEADVVGALEKAAAQGVALQNIQSVAGFERRLNDSSCGGCHQTRGIGGFHFPG VDWMAEKPSNTVVVPGSPHFFGDQVRRRDILTAFAEGRTPDFSRGFASRPQLRGSDELSGTVYNDGWGGHCYANRDGADN DKSFSRWTCAANLSCQTGPATRFGMCFIATR >Mature_511_residues MVVGLALLCCSSLAYADESPPLERGTAILEPSALRALDSGPFGLGRMLAKAGDAPLTDAALFALPSMQPVRKGLEAEFDR YVEAHNATLPNESIGVGNAYAFQLFDRAMLDSPDARFLLAGVVNRMDRAFVDPEHCGEVRLLYRLTRTTPPEARNGEVAS PRLPMTLNIVLTARSDAEAKSNMPSCADIAKRWLATSDLQLTGPELAAKLTAPDGPLALIRPENIHRIETNLQIAHAPKS AIRDFRTDYMMKVFDYQAASRTFEEAVLEDQIDRDRLLADAALAGEFKAWLLDPVHLGELDRGMAVIPDKFLAKVAVAPT PTGFVNSDMLPAYGLVQSEAGGAGVVFSEADVVGALEKAAAQGVALQNIQSVAGFERRLNDSSCGGCHQTRGIGGFHFPG VDWMAEKPSNTVVVPGSPHFFGDQVRRRDILTAFAEGRTPDFSRGFASRPQLRGSDELSGTVYNDGWGGHCYANRDGADN DKSFSRWTCAANLSCQTGPATRFGMCFIATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55109; Mature: 55109
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVGLALLCCSSLAYADESPPLERGTAILEPSALRALDSGPFGLGRMLAKAGDAPLTDAA CHHHHHHHHHHHHHCCCCCCCHHCCCEEECHHHHHHHCCCCCHHHHHHHHCCCCCCCHHH LFALPSMQPVRKGLEAEFDRYVEAHNATLPNESIGVGNAYAFQLFDRAMLDSPDARFLLA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH GVVNRMDRAFVDPEHCGEVRLLYRLTRTTPPEARNGEVASPRLPMTLNIVLTARSDAEAK HHHHHHHHHCCCHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHH SNMPSCADIAKRWLATSDLQLTGPELAAKLTAPDGPLALIRPENIHRIETNLQIAHAPKS CCCCCHHHHHHHHHCCCCCEEECHHHEEEEECCCCCEEEECCCCCEEEECCEEEEECCHH AIRDFRTDYMMKVFDYQAASRTFEEAVLEDQIDRDRLLADAALAGEFKAWLLDPVHLGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHCCC DRGMAVIPDKFLAKVAVAPTPTGFVNSDMLPAYGLVQSEAGGAGVVFSEADVVGALEKAA CCCCEECCHHHHHHEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHH AQGVALQNIQSVAGFERRLNDSSCGGCHQTRGIGGFHFPGVDWMAEKPSNTVVVPGSPHF HCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCEEEECCCCCC FGDQVRRRDILTAFAEGRTPDFSRGFASRPQLRGSDELSGTVYNDGWGGHCYANRDGADN CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC DKSFSRWTCAANLSCQTGPATRFGMCFIATR CCCCCEEEEEECCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MVVGLALLCCSSLAYADESPPLERGTAILEPSALRALDSGPFGLGRMLAKAGDAPLTDAA CHHHHHHHHHHHHHCCCCCCCHHCCCEEECHHHHHHHCCCCCHHHHHHHHCCCCCCCHHH LFALPSMQPVRKGLEAEFDRYVEAHNATLPNESIGVGNAYAFQLFDRAMLDSPDARFLLA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH GVVNRMDRAFVDPEHCGEVRLLYRLTRTTPPEARNGEVASPRLPMTLNIVLTARSDAEAK HHHHHHHHHCCCHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHH SNMPSCADIAKRWLATSDLQLTGPELAAKLTAPDGPLALIRPENIHRIETNLQIAHAPKS CCCCCHHHHHHHHHCCCCCEEECHHHEEEEECCCCCEEEECCCCCEEEECCEEEEECCHH AIRDFRTDYMMKVFDYQAASRTFEEAVLEDQIDRDRLLADAALAGEFKAWLLDPVHLGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCHHHCCC DRGMAVIPDKFLAKVAVAPTPTGFVNSDMLPAYGLVQSEAGGAGVVFSEADVVGALEKAA CCCCEECCHHHHHHEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHH AQGVALQNIQSVAGFERRLNDSSCGGCHQTRGIGGFHFPGVDWMAEKPSNTVVVPGSPHF HCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCEEEECCCCCC FGDQVRRRDILTAFAEGRTPDFSRGFASRPQLRGSDELSGTVYNDGWGGHCYANRDGADN CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC DKSFSRWTCAANLSCQTGPATRFGMCFIATR CCCCCEEEEEECCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA