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The map label for this gene is acoR [H]

Identifier: 146338469

GI number: 146338469

Start: 1477231

End: 1478193

Strand: Direct

Name: acoR [H]

Synonym: BRADO1386

Alternate gene names: 146338469

Gene position: 1477231-1478193 (Clockwise)

Preceding gene: 146338466

Following gene: 146338470

Centisome position: 19.81

GC content: 70.92

Gene sequence:

>963_bases
ATGGGGCGTTCGCCCGGAAAATCCCATTCGGACCGCGTGCTCGACGTCGTCGCCAAGGGGGCGCCGGCGGTTTCGGCGTT
GGCGGCGTCCTGGCGCCGCTCCGGTCATCTCCACGCGCTCGATCCCGCCACCCACGCGCCATCCTGCCGACTGACGGCAG
CCGAGATTGCCGAGGCGCGCGAGCGGCTCGGGCGGCTGCTCGCGATCGCGCAAGCAAGCCTCGACCGGCTGTTTCTTGCC
GTCGGCGGCGTCGGGTGCTCGGTGCTGCTGGCCGATGCCGACGGCACCGTGGTCGACCGGCGCGGCGCGCGCGGCGACGA
TTCGACCTTCGATTCCTGGGGGCTGTGGATCGGCGCGGTGTGGAGCGAGCGGCACGAAGGCACCAACGCGATCGGCACCT
GCCTGGTCGAGAAGCGGCCGCTGACCATCGACCGCGATCAGCACTATCTCACCCGCAATGCCAGGCTGTTCTGCACGACG
GCGCCGATCTTCGACGAGCATGGCCAGCTCAAGGCAGCGCTCGACGTCTCATCCTGCCGCGCCGATCTCACCGAAGGCTT
CGGCCGGCTGATCGCGACCACCGTCGCCGATGCCGCGCGCCTGATCGAGGCGGAGAATTTCCGCCAGGCCTTTCCGCACG
CGCGCATCGTGCTGACGCCGGACAGCGAGCGCGACATCAACTCGATGCTCGCGGTCGACGGCAACGATCTTGTCGTCGGC
GCCACCCGCGCGGCGCGTCGGGCGCTCGGCCTGTCGGCCTCGGCGCTGGCGCGTCCGGTGCCGGCCGGCGACCTGATCAA
GGGCGTGCCCGCGGCGGGTGACGACATCGATGCCGCCGAGCGCGCGGTTTTGAAGCGCGCCCTGGCGCGCGCTGGCGGCA
ACGTGTCGAGGGCCGCCAAGGAGCTCGACATGTCCAGGGCCACCTTGCATCGGAAGATGAAGCGGCTCGGGCTGGAGCGC
TGA

Upstream 100 bases:

>100_bases
CGCGGATCAAGGCGGGGTGTTGTAGTCGTCTCAATATGACGCCAAGACCCGCGGGACGGCTGCCGACCGCAGGGGCAGGG
GAGAGAGCCGGAGGAGGGAG

Downstream 100 bases:

>100_bases
GCGCGGCGCAATCCGCAATCCGGCGTCGAGCTGTCGCAGAACTGCGACACTTCCGGCGACGCGCCGCCGCCGCCTACTGG
TCTGCAAACCCGGTTTGAAC

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEARERLGRLLAIAQASLDRLFLA
VGGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAVWSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTT
APIFDEHGQLKAALDVSSCRADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVG
ATRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAKELDMSRATLHRKMKRLGLER

Sequences:

>Translated_320_residues
MGRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEARERLGRLLAIAQASLDRLFLA
VGGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAVWSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTT
APIFDEHGQLKAALDVSSCRADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVG
ATRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAKELDMSRATLHRKMKRLGLER
>Mature_319_residues
GRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEARERLGRLLAIAQASLDRLFLAV
GGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAVWSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTTA
PIFDEHGQLKAALDVSSCRADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVGA
TRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAKELDMSRATLHRKMKRLGLER

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 34053; Mature: 33922

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEAR
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHH
ERLGRLLAIAQASLDRLFLAVGGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHH
WSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTTAPIFDEHGQLKAALDVSSCR
HHHHCCCCCHHHHHEECCCCCEECCCCHHHHCCCEEEEEECCCCCCCCCEEEEECHHHHH
ADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEECCCCEEEE
ATRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAK
CHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
ELDMSRATLHRKMKRLGLER
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEAR
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHH
ERLGRLLAIAQASLDRLFLAVGGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHH
WSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTTAPIFDEHGQLKAALDVSSCR
HHHHCCCCCHHHHHEECCCCCEECCCCHHHHCCCEEEEEECCCCCCCCCEEEEECHHHHH
ADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEECCCCEEEE
ATRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAK
CHHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
ELDMSRATLHRKMKRLGLER
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]