| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is capA [H]
Identifier: 146338466
GI number: 146338466
Start: 1473917
End: 1475398
Strand: Direct
Name: capA [H]
Synonym: BRADO1383
Alternate gene names: 146338466
Gene position: 1473917-1475398 (Clockwise)
Preceding gene: 146338465
Following gene: 146338469
Centisome position: 19.77
GC content: 69.37
Gene sequence:
>1482_bases TTGGGTGGCGCGGCACCTGTCGGCGAACGTGCTGTCGTGTCCGGCGCGTCAGCCGTGATGCGGGCCGCGCTGGCGCTGCT GCTCGTCGTCTCCGGCTTGGCAGCCGCGGAGGCGGCGGAGGTTGATGCCGCGCGGCTGCTGTTCACCGGCGACATCATGC TATCGCGACAGGTGGCGCGCGAGATCGCCGCGCGCGGTGGCCTGTCGCCGTGGCACGGCATGAGCGACATGTTCCGGCGC GCCGATCTCGTTGTCGGAAATTTCGAGGGTACGGTGGGCACGGCCGAGGCGTGCGACGCGCCGAGGGAGCTGTGCTTCGC GGTCGATCCGCGCCTCGTGGGGCTGCTCAAGCACGCCGGCTTCACGGCGCTCGGTATCGCCAACAATCATTCGGGCGATC TCGGCGCGACCGGACGGAAGGCGACGCGCGAGGCGTTGCATGCCGCCGGCCTCGGTGCGATCGGCTCGGCGGAGTCTCCG GCGTTCCTCAAGGTCCGCGGGCGCACGCTGGCGCTGATCAGCCTCAATCTCGTGCCGGGCCGCGACGGCCAGATCGATCA GGTCCCGTCCTGGCCTGTGGCCCAGAAGCTGCGGCTGGCGCGGGCGCTGGCGGATTGGGTGCTCGTGTCCGTGCATTGGG GCAAGGAACTCGCCGACTGGGTGGTGCCCGAGCAGGAGTCCGCGGCGCGGTGGCTGGTAGCACAAGGCGCTGACCTCATC ATCGGCGCGCATCCGCATGTCGTGCAGCCGCCGGCCTGCGTCGACGGCAAGCCAGTGTTCTATTCGCTCGGCAATCACGT GTTCGACCAGAAATATCCACTCACCAAGCGCGGCCTGATCGCCGATTGCGAGATCGAGGACGACCGACTGGTCTGCAGCG GCCTGCCGACCGGCACGCCGGATGGCTCGGCGTATCCCGTGCTGTCAGCAACGCCAGAGCAGTCGGCTTCCAGTCTCGCG CAATGTCCCGTCCAGGCCGGCCCGCCGCTGCGCGTCGCGGGGCTGACCATCGGTCCGTGGCTTCGCGATGGCGAGATCGT CTCGGATCGGCTCGTTCTCGAAGGCCGCGCCAAGGCAAGCCGTTGGCGGACGCCGCCGCGCGCGCTGCTGTCAGCTGAAG CGGGACGGCTCGTCGCCGACCAGCCGCCGCTGCTGTTCACGCTGGAGCGCCATGCCTCGCCGATCGACGGCGAGGACGGT CCGCGTCCCTATGTCTACGAAGTCACGATGCATGGCCTGGTCGCCAGATGGCGCGGCTCCGCGCTGGCCTGGCCGCTGCT CGACGCCGTGCTGATCGCCGATGATGCCGGGCAGTCGTATCTGTGCGCGCTGCATCGTGGCGATTCCTTCATCATGCTGG ACACGGCCACGCCGTCGGCGACGCGAACGCAGGCCTATGCCTGGAACGGCTTCGGCTTCACCGGCGTGAATGACGGCGAG CTTGCCGCGCGCTGTGCGCAGCGTTTCGCGCCGGTCAATTGA
Upstream 100 bases:
>100_bases TCGTCAAGGGCGGTGTCTATTCCTACTACGAGTTCGCCTCGCCGCAGCCGATCGATGACGCCGCCTGGCGCAAGGTGGTC GATGCGCAGGTGCGGCCGGA
Downstream 100 bases:
>100_bases GCGCAAGTCCAGTGAGTGCAAGTCCACTCAGTGCAAGCCTACTCAGTGCACGCCCAACATAGCGCCGGGCGGCTGCAACT CTCAGACGGTCTCACGAGCT
Product: metallo-dependent phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MGGAAPVGERAVVSGASAVMRAALALLLVVSGLAAAEAAEVDAARLLFTGDIMLSRQVAREIAARGGLSPWHGMSDMFRR ADLVVGNFEGTVGTAEACDAPRELCFAVDPRLVGLLKHAGFTALGIANNHSGDLGATGRKATREALHAAGLGAIGSAESP AFLKVRGRTLALISLNLVPGRDGQIDQVPSWPVAQKLRLARALADWVLVSVHWGKELADWVVPEQESAARWLVAQGADLI IGAHPHVVQPPACVDGKPVFYSLGNHVFDQKYPLTKRGLIADCEIEDDRLVCSGLPTGTPDGSAYPVLSATPEQSASSLA QCPVQAGPPLRVAGLTIGPWLRDGEIVSDRLVLEGRAKASRWRTPPRALLSAEAGRLVADQPPLLFTLERHASPIDGEDG PRPYVYEVTMHGLVARWRGSALAWPLLDAVLIADDAGQSYLCALHRGDSFIMLDTATPSATRTQAYAWNGFGFTGVNDGE LAARCAQRFAPVN
Sequences:
>Translated_493_residues MGGAAPVGERAVVSGASAVMRAALALLLVVSGLAAAEAAEVDAARLLFTGDIMLSRQVAREIAARGGLSPWHGMSDMFRR ADLVVGNFEGTVGTAEACDAPRELCFAVDPRLVGLLKHAGFTALGIANNHSGDLGATGRKATREALHAAGLGAIGSAESP AFLKVRGRTLALISLNLVPGRDGQIDQVPSWPVAQKLRLARALADWVLVSVHWGKELADWVVPEQESAARWLVAQGADLI IGAHPHVVQPPACVDGKPVFYSLGNHVFDQKYPLTKRGLIADCEIEDDRLVCSGLPTGTPDGSAYPVLSATPEQSASSLA QCPVQAGPPLRVAGLTIGPWLRDGEIVSDRLVLEGRAKASRWRTPPRALLSAEAGRLVADQPPLLFTLERHASPIDGEDG PRPYVYEVTMHGLVARWRGSALAWPLLDAVLIADDAGQSYLCALHRGDSFIMLDTATPSATRTQAYAWNGFGFTGVNDGE LAARCAQRFAPVN >Mature_492_residues GGAAPVGERAVVSGASAVMRAALALLLVVSGLAAAEAAEVDAARLLFTGDIMLSRQVAREIAARGGLSPWHGMSDMFRRA DLVVGNFEGTVGTAEACDAPRELCFAVDPRLVGLLKHAGFTALGIANNHSGDLGATGRKATREALHAAGLGAIGSAESPA FLKVRGRTLALISLNLVPGRDGQIDQVPSWPVAQKLRLARALADWVLVSVHWGKELADWVVPEQESAARWLVAQGADLII GAHPHVVQPPACVDGKPVFYSLGNHVFDQKYPLTKRGLIADCEIEDDRLVCSGLPTGTPDGSAYPVLSATPEQSASSLAQ CPVQAGPPLRVAGLTIGPWLRDGEIVSDRLVLEGRAKASRWRTPPRALLSAEAGRLVADQPPLLFTLERHASPIDGEDGP RPYVYEVTMHGLVARWRGSALAWPLLDAVLIADDAGQSYLCALHRGDSFIMLDTATPSATRTQAYAWNGFGFTGVNDGEL AARCAQRFAPVN
Specific function: Essential for the synthesis of the polyglutamate capsule of B.anthracis which is one of the principal virulence factors during anthrax infection. May form a polyglutamyl synthetase complex together with proteins CapB and CapC [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 52070; Mature: 51939
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAAPVGERAVVSGASAVMRAALALLLVVSGLAAAEAAEVDAARLLFTGDIMLSRQVAR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH EIAARGGLSPWHGMSDMFRRADLVVGNFEGTVGTAEACDAPRELCFAVDPRLVGLLKHAG HHHHHCCCCCCCCHHHHHHHHCEEEECCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHCC FTALGIANNHSGDLGATGRKATREALHAAGLGAIGSAESPAFLKVRGRTLALISLNLVPG EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEECCC RDGQIDQVPSWPVAQKLRLARALADWVLVSVHWGKELADWVVPEQESAARWLVAQGADLI CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCHHHHHHHEECCCCEE IGAHPHVVQPPACVDGKPVFYSLGNHVFDQKYPLTKRGLIADCEIEDDRLVCSGLPTGTP EECCCCCCCCCCCCCCCCCEEHHCCHHCCCCCCCCCCCEEEECEECCCEEEECCCCCCCC DGSAYPVLSATPEQSASSLAQCPVQAGPPLRVAGLTIGPWLRDGEIVSDRLVLEGRAKAS CCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEECCEEEECCCCHHH RWRTPPRALLSAEAGRLVADQPPLLFTLERHASPIDGEDGPRPYVYEVTMHGLVARWRGS HCCCCHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCC ALAWPLLDAVLIADDAGQSYLCALHRGDSFIMLDTATPSATRTQAYAWNGFGFTGVNDGE EEHHHHHHEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCHH LAARCAQRFAPVN HHHHHHHHCCCCC >Mature Secondary Structure GGAAPVGERAVVSGASAVMRAALALLLVVSGLAAAEAAEVDAARLLFTGDIMLSRQVAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH EIAARGGLSPWHGMSDMFRRADLVVGNFEGTVGTAEACDAPRELCFAVDPRLVGLLKHAG HHHHHCCCCCCCCHHHHHHHHCEEEECCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHCC FTALGIANNHSGDLGATGRKATREALHAAGLGAIGSAESPAFLKVRGRTLALISLNLVPG EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEECCC RDGQIDQVPSWPVAQKLRLARALADWVLVSVHWGKELADWVVPEQESAARWLVAQGADLI CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCHHHHHHHEECCCCEE IGAHPHVVQPPACVDGKPVFYSLGNHVFDQKYPLTKRGLIADCEIEDDRLVCSGLPTGTP EECCCCCCCCCCCCCCCCCEEHHCCHHCCCCCCCCCCCEEEECEECCCEEEECCCCCCCC DGSAYPVLSATPEQSASSLAQCPVQAGPPLRVAGLTIGPWLRDGEIVSDRLVLEGRAKAS CCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEECCEEEECCCCHHH RWRTPPRALLSAEAGRLVADQPPLLFTLERHASPIDGEDGPRPYVYEVTMHGLVARWRGS HCCCCHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCC ALAWPLLDAVLIADDAGQSYLCALHRGDSFIMLDTATPSATRTQAYAWNGFGFTGVNDGE EEHHHHHHEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCHH LAARCAQRFAPVN HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536679; 10475962; 12004073 [H]