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The map label for this gene is yliB [C]

Identifier: 146338420

GI number: 146338420

Start: 1423371

End: 1424942

Strand: Direct

Name: yliB [C]

Synonym: BRADO1335

Alternate gene names: 146338420

Gene position: 1423371-1424942 (Clockwise)

Preceding gene: 146338419

Following gene: 146338423

Centisome position: 19.09

GC content: 65.9

Gene sequence:

>1572_bases
ATGAAACGACACCACGCTCTGGCCGCCGCTCTGCTCTGTCTGGCCGCGGCCCTGCCGCCCACATTCGCGCGCGCCGAGAG
CGTGCTGAGGGTGAAGCCATCGGGCGACCTCAAGGTGCTCGATCCGACGATCGCCGCGGATTCGATCGCGCGCAATTTCG
GCTACATGATCTACGACACGCTGTTCACGGTCGACGACAAGCTCCAGGTCAAGCCGCAGATGGTCGAGAGCTGGACCACC
TCCGCCGACCGCAAGATATGGACCTTCAAGCTGCGCGACGGGCTGAAGTTCGGCGACGGGGCGAGCGTGACGTCGGAGGA
TGCTGTCGCCTCGCTCAAGCGCTGGAGCCAGGCCGATGCGATGGGGCAGATGCTGAACGCCCATGGCGCGTCATGGGATG
TCGTCGATGCCACCAGCTTCACTCTGACGCTGAAGGAACCCTGGGGCTTCGTGCTCGATGCGCTCGCCAAGCCCGGCGCG
CCGGTGCCGTTCATCGTGCCTGCGCGAGTTATCGCCGCAACCACTGCCGGCCAGCCGCTCGCGGAGCAGACCGGCTCCGG
CCCGTTCATCTTCAAGAAGGACGCGTGGGTGCCGGGCTCGAAGCTCGTCTTCGTCAAGAACCCGTATTACGTGCCGCGCG
CTGAGCCGCCCTCCGGCCTGGCGGGCGGCAAGGTCGTGAAGTTCGATCGTGTCGAATGGCTGATCATTCCGGACCAGCAG
ACCGCGCTCGATGCGCTGAAGAAGGGCGAGCTCGACATCGCGGAGGACATCCCGACCGATCTCCTTCCGGTGGCGAAAGC
GAGCAAGGACGTGGTCGTCTCCAACCAGGACGAGATCGGCGTGGCGCAGCAGATCCGGCTCAACTCGACCCAGCCGCCGT
TCGACAATCCCGCCATTCGTCGCGCCGCGCTGCTCGCCGTCAATCCGCAGGACTATATCGAGGCCTGGGGCGGCGGCGAG
GGCAGGCTGATCAAGGCCTGCAGATCGTTCTACATCTGCGCCTCGCCCTACTATACGGAGGCCGGCTTCCCGTCCTTCGA
TCTGCAGAAGGCGAAGACGCTGTTGCGCGAGAGCGGCTATGACGGCACGCCGGTCGTGATCCTGGACGCGTCCGAGAACG
CGCAGATCCATCCTGCGAGCCTGGTCGCCGAGCAGCAGCTCAAGGCCGCCGGCTTCAAGGTCGACGTTCAGGCGATGGAC
TGGGCGACGGTGGTGAGCCGTCGCACCAAGAAGGAGCCGGTCGGGCAGGGCGGCTGGTCGATCTTCATCTCCGGCCCCGG
CGGTCTCGACATGATGCTTCCGATCAGCCATCTCGGCCTGCGCTCGAACTGCGACAAGGCGTGGTTCGGCTGGCCCTGCG
ATGCCGAGATCGAGAAGCTGCGTGCCGCATTCGGCGACTCCGCCGACATCGCCGAACGCAAGGCGCTGGCCGAGCAGATC
CAGCTGCGCGCTGTGCAGACGGTTCCCTACATCCCGATCGCGGTAGCCTATCAGTTCCGCGCGGCGCGCGCCGATCTCAC
CGGGATGCTCAATCCGCCGGCGCCGGTGTACTGGAACGTCTCACGCAAGTGA

Upstream 100 bases:

>100_bases
CATCCGCCGCAGCGGCGCGCGTCGCGCGCAACTCAAGCAGTCGATCTCGAGCTGATCACACGTCGGCAGCGTCACGTCCG
ACGATCATGGGAGGGGAAGA

Downstream 100 bases:

>100_bases
GACGGCCCGAGCTAGGCCTTGGGCAGTTCGAACACCAGGCAGGTGGTGGTGGCATGCGCCAGCAGACGGCCTTCTAAATC
GGTGATGCGCGCCTCGGCGG

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKRHHALAAALLCLAAALPPTFARAESVLRVKPSGDLKVLDPTIAADSIARNFGYMIYDTLFTVDDKLQVKPQMVESWTT
SADRKIWTFKLRDGLKFGDGASVTSEDAVASLKRWSQADAMGQMLNAHGASWDVVDATSFTLTLKEPWGFVLDALAKPGA
PVPFIVPARVIAATTAGQPLAEQTGSGPFIFKKDAWVPGSKLVFVKNPYYVPRAEPPSGLAGGKVVKFDRVEWLIIPDQQ
TALDALKKGELDIAEDIPTDLLPVAKASKDVVVSNQDEIGVAQQIRLNSTQPPFDNPAIRRAALLAVNPQDYIEAWGGGE
GRLIKACRSFYICASPYYTEAGFPSFDLQKAKTLLRESGYDGTPVVILDASENAQIHPASLVAEQQLKAAGFKVDVQAMD
WATVVSRRTKKEPVGQGGWSIFISGPGGLDMMLPISHLGLRSNCDKAWFGWPCDAEIEKLRAAFGDSADIAERKALAEQI
QLRAVQTVPYIPIAVAYQFRAARADLTGMLNPPAPVYWNVSRK

Sequences:

>Translated_523_residues
MKRHHALAAALLCLAAALPPTFARAESVLRVKPSGDLKVLDPTIAADSIARNFGYMIYDTLFTVDDKLQVKPQMVESWTT
SADRKIWTFKLRDGLKFGDGASVTSEDAVASLKRWSQADAMGQMLNAHGASWDVVDATSFTLTLKEPWGFVLDALAKPGA
PVPFIVPARVIAATTAGQPLAEQTGSGPFIFKKDAWVPGSKLVFVKNPYYVPRAEPPSGLAGGKVVKFDRVEWLIIPDQQ
TALDALKKGELDIAEDIPTDLLPVAKASKDVVVSNQDEIGVAQQIRLNSTQPPFDNPAIRRAALLAVNPQDYIEAWGGGE
GRLIKACRSFYICASPYYTEAGFPSFDLQKAKTLLRESGYDGTPVVILDASENAQIHPASLVAEQQLKAAGFKVDVQAMD
WATVVSRRTKKEPVGQGGWSIFISGPGGLDMMLPISHLGLRSNCDKAWFGWPCDAEIEKLRAAFGDSADIAERKALAEQI
QLRAVQTVPYIPIAVAYQFRAARADLTGMLNPPAPVYWNVSRK
>Mature_523_residues
MKRHHALAAALLCLAAALPPTFARAESVLRVKPSGDLKVLDPTIAADSIARNFGYMIYDTLFTVDDKLQVKPQMVESWTT
SADRKIWTFKLRDGLKFGDGASVTSEDAVASLKRWSQADAMGQMLNAHGASWDVVDATSFTLTLKEPWGFVLDALAKPGA
PVPFIVPARVIAATTAGQPLAEQTGSGPFIFKKDAWVPGSKLVFVKNPYYVPRAEPPSGLAGGKVVKFDRVEWLIIPDQQ
TALDALKKGELDIAEDIPTDLLPVAKASKDVVVSNQDEIGVAQQIRLNSTQPPFDNPAIRRAALLAVNPQDYIEAWGGGE
GRLIKACRSFYICASPYYTEAGFPSFDLQKAKTLLRESGYDGTPVVILDASENAQIHPASLVAEQQLKAAGFKVDVQAMD
WATVVSRRTKKEPVGQGGWSIFISGPGGLDMMLPISHLGLRSNCDKAWFGWPCDAEIEKLRAAFGDSADIAERKALAEQI
QLRAVQTVPYIPIAVAYQFRAARADLTGMLNPPAPVYWNVSRK

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=518, Percent_Identity=27.027027027027, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787762, Length=544, Percent_Identity=26.8382352941176, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789397, Length=525, Percent_Identity=24, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787495, Length=539, Percent_Identity=23.3766233766234, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789887, Length=491, Percent_Identity=23.8289205702648, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56821; Mature: 56821

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHHALAAALLCLAAALPPTFARAESVLRVKPSGDLKVLDPTIAADSIARNFGYMIYDT
CCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHCCCEEEHE
LFTVDDKLQVKPQMVESWTTSADRKIWTFKLRDGLKFGDGASVTSEDAVASLKRWSQADA
EEECCCCEECCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MGQMLNAHGASWDVVDATSFTLTLKEPWGFVLDALAKPGAPVPFIVPARVIAATTAGQPL
HHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHCCCCCCCCEEECCHHEEECCCCCCH
AEQTGSGPFIFKKDAWVPGSKLVFVKNPYYVPRAEPPSGLAGGKVVKFDRVEWLIIPDQQ
HHHCCCCCEEEECCCCCCCCEEEEEECCEECCCCCCCCCCCCCEEEEEECEEEEEECCCH
TALDALKKGELDIAEDIPTDLLPVAKASKDVVVSNQDEIGVAQQIRLNSTQPPFDNPAIR
HHHHHHHCCCCCCHHCCCCHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHHC
RAALLAVNPQDYIEAWGGGEGRLIKACRSFYICASPYYTEAGFPSFDLQKAKTLLRESGY
EEEEEEECCHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
DGTPVVILDASENAQIHPASLVAEQQLKAAGFKVDVQAMDWATVVSRRTKKEPVGQGGWS
CCCCEEEEECCCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCE
IFISGPGGLDMMLPISHLGLRSNCDKAWFGWPCDAEIEKLRAAFGDSADIAERKALAEQI
EEEECCCCCEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
QLRAVQTVPYIPIAVAYQFRAARADLTGMLNPPAPVYWNVSRK
HHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MKRHHALAAALLCLAAALPPTFARAESVLRVKPSGDLKVLDPTIAADSIARNFGYMIYDT
CCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHCCCEEEHE
LFTVDDKLQVKPQMVESWTTSADRKIWTFKLRDGLKFGDGASVTSEDAVASLKRWSQADA
EEECCCCEECCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MGQMLNAHGASWDVVDATSFTLTLKEPWGFVLDALAKPGAPVPFIVPARVIAATTAGQPL
HHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHCCCCCCCCEEECCHHEEECCCCCCH
AEQTGSGPFIFKKDAWVPGSKLVFVKNPYYVPRAEPPSGLAGGKVVKFDRVEWLIIPDQQ
HHHCCCCCEEEECCCCCCCCEEEEEECCEECCCCCCCCCCCCCEEEEEECEEEEEECCCH
TALDALKKGELDIAEDIPTDLLPVAKASKDVVVSNQDEIGVAQQIRLNSTQPPFDNPAIR
HHHHHHHCCCCCCHHCCCCHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHHC
RAALLAVNPQDYIEAWGGGEGRLIKACRSFYICASPYYTEAGFPSFDLQKAKTLLRESGY
EEEEEEECCHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
DGTPVVILDASENAQIHPASLVAEQQLKAAGFKVDVQAMDWATVVSRRTKKEPVGQGGWS
CCCCEEEEECCCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCE
IFISGPGGLDMMLPISHLGLRSNCDKAWFGWPCDAEIEKLRAAFGDSADIAERKALAEQI
EEEECCCCCEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
QLRAVQTVPYIPIAVAYQFRAARADLTGMLNPPAPVYWNVSRK
HHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]