| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338392
Identifier: 146338392
GI number: 146338392
Start: 1394315
End: 1396315
Strand: Direct
Name: 146338392
Synonym: BRADO1305
Alternate gene names: NA
Gene position: 1394315-1396315 (Clockwise)
Preceding gene: 146338390
Following gene: 146338393
Centisome position: 18.7
GC content: 64.92
Gene sequence:
>2001_bases ATGAGCCCGACCGGCTGGGTGTATGAGATCTGCCCGCGGCCCGCCTCCGGCACCACCTGTCCCGCCGACTCGGCCGTGGC GGACTATGGCGGCGTGCGGCTGGCGCTGCAGAAGGGGGACACGCTCAAGATAAGGCTGGTCAATCAGCTGCCGCAGCTCG ACCCGGCCAAGGTGAACCACAATGTGGATCCCGGCCAGGCCAATTTGTTCCGCAATCCGACCAACCTGCACACCCACGGC CTGATCGTCGAGCCGCGGGCGCCGACCCTGAGAGACCAGACCTTCGGTGACTACGTCTTCGTCCAGATCTACAACTCGGC CAACGGCATGCCGGTGCCGCAGACGACGCATCAGCACGGCTCCAACAAGATGGACTATGCGGATTTCCGCATCGAGATTC CGCGCAATCACCCGTCGGGCCAGTTCTGGTTTCACCCGCATATCCACGGCCTGTCGCTGAACCAGGTCTCGCAGGGTCTG GCCGGCATCATCTCGGTCGGCGAGGTCTCGGACTACGCCCATGGCGACGCGCGCGACACGCCGTTTCCCGATGCGAGCGT GCGCCATCTGATCCTGAAGGACATTCAGGTTGCACCCGGTGGCCCGGTTCAGTTCGACGCCGGCCCGGCGCAGACGACGC CGGGCGAGGTGATCAATCAGGAGGATCCCGGCTTCTGCGCCCAGTTTCCGGCCGACAGCTCCGAGGTGCGCGAGGGCTCT TGTCCAGGTGTCGATGCCTCCGCCGATGGCGGCTCCAACTTCAGCGGCGGCAAATGGTACTTCACCGTCAACGGCCGGAC CTTCCCGAAGATCAAGATCACGGATTCCGACGGCGAGGTCTGGCGGCTCACCAATGCGTCGGGCAGCCTGTCCTACAATC TTCAGCTGACCGAGGACGAGTCGCAGAAGCCGATGATCATGCAGCTCATCTCCGTGGACGGCGTCAGTGTGAATCTCCCG CAGGACACCACGATGGATACGATGGTCCGGCTCGGCGGCGCGCGCTTCCGCGTCGTGCCTTGTCCGCCGTTGCCGACCTC GCGCTTCCATTCGAAGCCGGTCTGCGTCACCCAGATCGTGATGATGCCGAGCTCGCGCACCGAGGTGTTCGTCACCTATC GCGATCCCGCGACGGGGGCGATCGCGAGCCCCGGCCATTCCGCGTCCGCGACCTTCAAGATGGCAGGCCTGACGATGGGC AGCGGCGACCAATGGCCTGCGGTCGATCTCGCCAAGGTGCACTTCCATCAGCACGGGTCACGGCACCACATCGCGTACGG CCTGGACATCAGGGGCGACGCATTGGCGACGATGCAGCCGTCGGGCATCCTCGACGCCAAGGTCCCCTACGCGAATGCGG CGGCGCTGCCTGCCGGATGCAAGCCGTTGCCGGCGGGACACCGCCGCCGCATCTTCTTCGGCCTCGCCGATCTGACCGAC GACGGCACCTTCGGTCTCGGCTATGAGGAGGTCGATGAGAACGGCAATCCGGTGCCGGGCACGCAGCTGCCGGTCAGCCA GTTCGATCCGGCGCAGAACATCGTCTGCCTGCCGCTCGCGGCAGGGCAGCGTCCGGTCCACGAGACCTGGGAGCTGGTGC AGCTGTCGACGGAGAACCACAACTTCCACATCCACCAGACCCGGTTCAGGACGATCAACAGCAAGGCCGGCGAGAACACG CCGTTGTCGGTGTCGTTCAACCGCAGCATCGGCGGCGGCATGCTGCAGGACAATGTTCCGCTCGGCGTCGCGACGCCCAA TGTGCCGGAGGTGATGGACGCGCAAAGCGGAGTCTGCAGTATCGAGCAGTGGCGCAATGGCCAGTGCACCTCGAAGCCGG TCGTCGTGGATATCCCGTTCTCGCAGGTCGGCGAGTTCGTCTATCACTGTCACATCCTCGAGCATGAGGACGGGGGCATG ATGGCGAAGATCAAGGTTGTCCCCTCACCCTCACCCTCACACGGCAACCCCTGGGAAGCGATGAACCAGATGCCTTGGTA G
Upstream 100 bases:
>100_bases GACAGTGTTCAGGAGCAGGCACGGCGTCCTGGATCTGCTGATGATCGCCCGCGCCAAGCCGATCTCCACGATCAGCTATG CGCCACCGGGCGGATCGCCC
Downstream 100 bases:
>100_bases TCGCGGACGGACGATGTCCTTCGTGGCTCTCATCGGACCGACGCCGCATCCGCGGCGTCGGTCACGCCGAGTTCTTCGGC GGTGCTGCCTCACCTGCTCG
Product: putative multicopper oxidase
Products: NA
Alternate protein names: Phosphoenolpyruvate-Protein Phosphotransferase; L-Ascorbate Oxidase Oxidoreductase Protein
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MSPTGWVYEICPRPASGTTCPADSAVADYGGVRLALQKGDTLKIRLVNQLPQLDPAKVNHNVDPGQANLFRNPTNLHTHG LIVEPRAPTLRDQTFGDYVFVQIYNSANGMPVPQTTHQHGSNKMDYADFRIEIPRNHPSGQFWFHPHIHGLSLNQVSQGL AGIISVGEVSDYAHGDARDTPFPDASVRHLILKDIQVAPGGPVQFDAGPAQTTPGEVINQEDPGFCAQFPADSSEVREGS CPGVDASADGGSNFSGGKWYFTVNGRTFPKIKITDSDGEVWRLTNASGSLSYNLQLTEDESQKPMIMQLISVDGVSVNLP QDTTMDTMVRLGGARFRVVPCPPLPTSRFHSKPVCVTQIVMMPSSRTEVFVTYRDPATGAIASPGHSASATFKMAGLTMG SGDQWPAVDLAKVHFHQHGSRHHIAYGLDIRGDALATMQPSGILDAKVPYANAAALPAGCKPLPAGHRRRIFFGLADLTD DGTFGLGYEEVDENGNPVPGTQLPVSQFDPAQNIVCLPLAAGQRPVHETWELVQLSTENHNFHIHQTRFRTINSKAGENT PLSVSFNRSIGGGMLQDNVPLGVATPNVPEVMDAQSGVCSIEQWRNGQCTSKPVVVDIPFSQVGEFVYHCHILEHEDGGM MAKIKVVPSPSPSHGNPWEAMNQMPW
Sequences:
>Translated_666_residues MSPTGWVYEICPRPASGTTCPADSAVADYGGVRLALQKGDTLKIRLVNQLPQLDPAKVNHNVDPGQANLFRNPTNLHTHG LIVEPRAPTLRDQTFGDYVFVQIYNSANGMPVPQTTHQHGSNKMDYADFRIEIPRNHPSGQFWFHPHIHGLSLNQVSQGL AGIISVGEVSDYAHGDARDTPFPDASVRHLILKDIQVAPGGPVQFDAGPAQTTPGEVINQEDPGFCAQFPADSSEVREGS CPGVDASADGGSNFSGGKWYFTVNGRTFPKIKITDSDGEVWRLTNASGSLSYNLQLTEDESQKPMIMQLISVDGVSVNLP QDTTMDTMVRLGGARFRVVPCPPLPTSRFHSKPVCVTQIVMMPSSRTEVFVTYRDPATGAIASPGHSASATFKMAGLTMG SGDQWPAVDLAKVHFHQHGSRHHIAYGLDIRGDALATMQPSGILDAKVPYANAAALPAGCKPLPAGHRRRIFFGLADLTD DGTFGLGYEEVDENGNPVPGTQLPVSQFDPAQNIVCLPLAAGQRPVHETWELVQLSTENHNFHIHQTRFRTINSKAGENT PLSVSFNRSIGGGMLQDNVPLGVATPNVPEVMDAQSGVCSIEQWRNGQCTSKPVVVDIPFSQVGEFVYHCHILEHEDGGM MAKIKVVPSPSPSHGNPWEAMNQMPW >Mature_665_residues SPTGWVYEICPRPASGTTCPADSAVADYGGVRLALQKGDTLKIRLVNQLPQLDPAKVNHNVDPGQANLFRNPTNLHTHGL IVEPRAPTLRDQTFGDYVFVQIYNSANGMPVPQTTHQHGSNKMDYADFRIEIPRNHPSGQFWFHPHIHGLSLNQVSQGLA GIISVGEVSDYAHGDARDTPFPDASVRHLILKDIQVAPGGPVQFDAGPAQTTPGEVINQEDPGFCAQFPADSSEVREGSC PGVDASADGGSNFSGGKWYFTVNGRTFPKIKITDSDGEVWRLTNASGSLSYNLQLTEDESQKPMIMQLISVDGVSVNLPQ DTTMDTMVRLGGARFRVVPCPPLPTSRFHSKPVCVTQIVMMPSSRTEVFVTYRDPATGAIASPGHSASATFKMAGLTMGS GDQWPAVDLAKVHFHQHGSRHHIAYGLDIRGDALATMQPSGILDAKVPYANAAALPAGCKPLPAGHRRRIFFGLADLTDD GTFGLGYEEVDENGNPVPGTQLPVSQFDPAQNIVCLPLAAGQRPVHETWELVQLSTENHNFHIHQTRFRTINSKAGENTP LSVSFNRSIGGGMLQDNVPLGVATPNVPEVMDAQSGVCSIEQWRNGQCTSKPVVVDIPFSQVGEFVYHCHILEHEDGGMM AKIKVVPSPSPSHGNPWEAMNQMPW
Specific function: Unknown
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72067; Mature: 71936
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTGWVYEICPRPASGTTCPADSAVADYGGVRLALQKGDTLKIRLVNQLPQLDPAKVNH CCCCCCEEEECCCCCCCCCCCCCCCHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHCCC NVDPGQANLFRNPTNLHTHGLIVEPRAPTLRDQTFGDYVFVQIYNSANGMPVPQTTHQHG CCCCCCHHEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCC SNKMDYADFRIEIPRNHPSGQFWFHPHIHGLSLNQVSQGLAGIISVGEVSDYAHGDARDT CCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCC PFPDASVRHLILKDIQVAPGGPVQFDAGPAQTTPGEVINQEDPGFCAQFPADSSEVREGS CCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCCHHCCCCCCCEEEECCCCHHHHCCCC CPGVDASADGGSNFSGGKWYFTVNGRTFPKIKITDSDGEVWRLTNASGSLSYNLQLTEDE CCCCCCCCCCCCCCCCCEEEEEECCEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCC SQKPMIMQLISVDGVSVNLPQDTTMDTMVRLGGARFRVVPCPPLPTSRFHSKPVCVTQIV CCCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEEEEE MMPSSRTEVFVTYRDPATGAIASPGHSASATFKMAGLTMGSGDQWPAVDLAKVHFHQHGS ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEHHHCCCC RHHIAYGLDIRGDALATMQPSGILDAKVPYANAAALPAGCKPLPAGHRRRIFFGLADLTD CEEEEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC DGTFGLGYEEVDENGNPVPGTQLPVSQFDPAQNIVCLPLAAGQRPVHETWELVQLSTENH CCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHCEEEEEEECCCC NFHIHQTRFRTINSKAGENTPLSVSFNRSIGGGMLQDNVPLGVATPNVPEVMDAQSGVCS CEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCEEEECCCCCHHHHCCCCCEE IEQWRNGQCTSKPVVVDIPFSQVGEFVYHCHILEHEDGGMMAKIKVVPSPSPSHGNPWEA HHHHCCCCCCCCCEEEECCHHHHCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHH MNQMPW HHCCCC >Mature Secondary Structure SPTGWVYEICPRPASGTTCPADSAVADYGGVRLALQKGDTLKIRLVNQLPQLDPAKVNH CCCCCEEEECCCCCCCCCCCCCCCHHCCCCEEEEEECCCEEEEEEECCCCCCCCHHCCC NVDPGQANLFRNPTNLHTHGLIVEPRAPTLRDQTFGDYVFVQIYNSANGMPVPQTTHQHG CCCCCCHHEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCC SNKMDYADFRIEIPRNHPSGQFWFHPHIHGLSLNQVSQGLAGIISVGEVSDYAHGDARDT CCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCC PFPDASVRHLILKDIQVAPGGPVQFDAGPAQTTPGEVINQEDPGFCAQFPADSSEVREGS CCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCCHHCCCCCCCEEEECCCCHHHHCCCC CPGVDASADGGSNFSGGKWYFTVNGRTFPKIKITDSDGEVWRLTNASGSLSYNLQLTEDE CCCCCCCCCCCCCCCCCEEEEEECCEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCC SQKPMIMQLISVDGVSVNLPQDTTMDTMVRLGGARFRVVPCPPLPTSRFHSKPVCVTQIV CCCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEEEEE MMPSSRTEVFVTYRDPATGAIASPGHSASATFKMAGLTMGSGDQWPAVDLAKVHFHQHGS ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEHHHCCCC RHHIAYGLDIRGDALATMQPSGILDAKVPYANAAALPAGCKPLPAGHRRRIFFGLADLTD CEEEEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC DGTFGLGYEEVDENGNPVPGTQLPVSQFDPAQNIVCLPLAAGQRPVHETWELVQLSTENH CCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHCEEEEEEECCCC NFHIHQTRFRTINSKAGENTPLSVSFNRSIGGGMLQDNVPLGVATPNVPEVMDAQSGVCS CEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCEEEECCCCCHHHHCCCCCEE IEQWRNGQCTSKPVVVDIPFSQVGEFVYHCHILEHEDGGMMAKIKVVPSPSPSHGNPWEA HHHHCCCCCCCCCEEEECCHHHHCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHH MNQMPW HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA