| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338386
Identifier: 146338386
GI number: 146338386
Start: 1389438
End: 1390142
Strand: Direct
Name: 146338386
Synonym: BRADO1298
Alternate gene names: NA
Gene position: 1389438-1390142 (Clockwise)
Preceding gene: 146338385
Following gene: 146338387
Centisome position: 18.63
GC content: 68.51
Gene sequence:
>705_bases ATGATCACGCGAGCCGACCATGCCCAATCGGGCTTCACCTTGATCGAGGCGCTGGCCGCAATGGTTCTGATGGGGCTGCT CGTCTCGGCCCTGGCCCTGTTGACAGCGCAGTGGCTGCCGAACTGGGATCGCGGCCTGCACCGCATCCAGCGCAGTGAAT CGGTGAGCGTCGCGCTCGATCGTATCAGCGCCGATATCGCGGCCTCCGAATTCATCCGGGCCGACGCGCAGAGCAAGTCT GTTCTGTTCGATGGATCGGAAACCTCGGTCACCTTTGTCCGGATCTCGCTGGGCGCGAAGAGTGGTCGCGGCCTCGATCT TGTTCGCATCGCCGAGACCGGCAGCGGCGACAGCGCCGTGATCACGCGTAAGCGCGCGGCGTTCGCGCCGGGTCGCTCGT CCGGCCCAGACCTCGGCGATCCCGTCGTCCTGCTGCAAGCGCCTTATCGGGTGTCGTTCGCCTTTGCCGGAGCCGATCGC GACTGGACGCCGTCGTGGCATGACGCCGAGCGGCTGCCCTCCGCGGTGCGGGTCACCTTGCGCAACGCAGCCGACGCGAA GGCGCCGGCGATCTCGCGAATCGTGGCCATCCGTGTCTCGGCGCCGGCCGACAGCGTCTGCAGTCCGGCAGACCGGACAT GCGACCGGCAGGCGCCGTCCGCAGGCGCCACCGTCGGACGCGCCGCCGCGCGAACGGAGCCATGA
Upstream 100 bases:
>100_bases CCACCTGGATCCCTGAAAGGATCTTGCTGCAGGTTCGCGCGCCGTCCGGCGCGACGATGGAGTTGGAGACGGTTCGTCTG TTTCGAAAGCAGGCCGGGCG
Downstream 100 bases:
>100_bases TCATGCCGCGACACAGGCAGCATCGGTCTTCCGATCATCCTGGCGAGCGCGGCTTCGTCCTGGTCGCGGTGCTCTGGATT CTGATCTCGCTGGCGGGGCT
Product: putative general secretion pathway protein J
Products: NA
Alternate protein names: General Secretion Pathway Protein J GspJ
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MITRADHAQSGFTLIEALAAMVLMGLLVSALALLTAQWLPNWDRGLHRIQRSESVSVALDRISADIAASEFIRADAQSKS VLFDGSETSVTFVRISLGAKSGRGLDLVRIAETGSGDSAVITRKRAAFAPGRSSGPDLGDPVVLLQAPYRVSFAFAGADR DWTPSWHDAERLPSAVRVTLRNAADAKAPAISRIVAIRVSAPADSVCSPADRTCDRQAPSAGATVGRAAARTEP
Sequences:
>Translated_234_residues MITRADHAQSGFTLIEALAAMVLMGLLVSALALLTAQWLPNWDRGLHRIQRSESVSVALDRISADIAASEFIRADAQSKS VLFDGSETSVTFVRISLGAKSGRGLDLVRIAETGSGDSAVITRKRAAFAPGRSSGPDLGDPVVLLQAPYRVSFAFAGADR DWTPSWHDAERLPSAVRVTLRNAADAKAPAISRIVAIRVSAPADSVCSPADRTCDRQAPSAGATVGRAAARTEP >Mature_234_residues MITRADHAQSGFTLIEALAAMVLMGLLVSALALLTAQWLPNWDRGLHRIQRSESVSVALDRISADIAASEFIRADAQSKS VLFDGSETSVTFVRISLGAKSGRGLDLVRIAETGSGDSAVITRKRAAFAPGRSSGPDLGDPVVLLQAPYRVSFAFAGADR DWTPSWHDAERLPSAVRVTLRNAADAKAPAISRIVAIRVSAPADSVCSPADRTCDRQAPSAGATVGRAAARTEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24661; Mature: 24661
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRADHAQSGFTLIEALAAMVLMGLLVSALALLTAQWLPNWDRGLHRIQRSESVSVALD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH RISADIAASEFIRADAQSKSVLFDGSETSVTFVRISLGAKSGRGLDLVRIAETGSGDSAV HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEE ITRKRAAFAPGRSSGPDLGDPVVLLQAPYRVSFAFAGADRDWTPSWHDAERLPSAVRVTL EEEHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHCCHHHHHHH RNAADAKAPAISRIVAIRVSAPADSVCSPADRTCDRQAPSAGATVGRAAARTEP HCCCCCCCHHHEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MITRADHAQSGFTLIEALAAMVLMGLLVSALALLTAQWLPNWDRGLHRIQRSESVSVALD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH RISADIAASEFIRADAQSKSVLFDGSETSVTFVRISLGAKSGRGLDLVRIAETGSGDSAV HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEE ITRKRAAFAPGRSSGPDLGDPVVLLQAPYRVSFAFAGADRDWTPSWHDAERLPSAVRVTL EEEHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHCCHHHHHHH RNAADAKAPAISRIVAIRVSAPADSVCSPADRTCDRQAPSAGATVGRAAARTEP HCCCCCCCHHHEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA