BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is hflB [C]

Identifier: 146338365

GI number: 146338365

Start: 1360049

End: 1362193

Strand: Direct

Name: hflB [C]

Synonym: BRADO1274

Alternate gene names: 146338365

Gene position: 1360049-1362193 (Clockwise)

Preceding gene: 146338364

Following gene: 146338366

Centisome position: 18.24

GC content: 68.11

Gene sequence:

>2145_bases
ATGATCACGGACGCCCAGCGGGCCGCCGGAACCGAGCTGACCAGGGTCGTCAAGGAGGCTGCGGCCGGCGTGGTCGGCCG
CGGCATCGTTCGCATCGATCCCGCTGACGCGCGTCTGCTCGGCATGGTGGCCGGCGACGTCGCGCGGATCCGCGGCAATC
GCGAGACCCATGCGCGCATCCTGTTTCTCAACGAGAGTCTCCGAGGCAAGGGCATCGTCGTTCTCGACGGCATCATCCGG
CGCAATGCCGGCGTGCAGATCGGCGAGTCCGTCACGCTGTCGCTGGCGCAGCCGAATGCGGCCACCAGCGTGACCCTGAG
CGTGACCGGCGCGAGCCTGTCGAGCGGCGGCAAGAGCCGGGTCGTCGCCGCGCTGGAGCACATCCCGATCACTGCGGGCG
ACAGCATTCGCCTGCCGCTGATGGGCGGCAACAGCACGAGCTGCGAGGTCACCGCGACGCGGCCCAGCGGCCCCGTGCTG
ATCACCACGGAAACACGGCTGGACATATCCGCGCGCGAGGTGGGCGACGCCGACCGCAGCATCACCTACGAGGATCTGGG
TGGCGTCGACCAGGAGCTGCAGCGGGTGCGCGAGATGGTCGAACTGCCGCTGCGGCAGCCGGAGCTGTTCGAACGCGTCG
GCATCGACCCGCCGCGCGGCATCCTCTTCTCCGGCCCGCCCGGCACCGGCAAGACCCTGCTCGCGCGCGCCATCGCCTAT
GAGAACAAGTGCAGCTTCTTCCAGATCAGCGGTCCGGAGATCGTCGCCAAGCACTACGGCGAGTCGGAGGCGCAGCTGCG
GTCGGTGTTCGAGCAGGCGAGGGCGAAGGCGCCTTCCATCGTATTCCTCGACGAGCTCGATGCGATCGCGCCCAAGCGCG
AAGGATTGAGCGGCGACCGGCAGGTCGAGCGTCGCATCGTCGGCCAGTTGCTGACCTTGATGGACGGCATCCGCTCGCGC
GGTGCGGTCACCGTGATCGGCGCGACCAACCTGCCTGATAGTATCGATCCGGCGCTACGGCGGCCCGGCCGCTTCGACCG
CGAGATTCGCTTCGGCGCGCCTGACCAGCAGGGACGGCGACAGATTCTCGAGGTGCACAGCAAGACCATGCCGCTGTCGC
AGGATGTCGATCTCGATCATATCGCGCGCATATCGCACGGCTATGTCGGCGCCGATCTCGCCGCGCTGTGCCGGGAGGCC
GGCATGGCTGCTCTGCGCCGCGTCGCCAAGCTCACCGGCGCGATCGAGGATGTCGATGTCGGCAGCCTGTTCGTGACCGC
CGCCGACTTCGACACGGGATTCGCGGAGACGCGGCCGAGCGCGCTGCGCGAGTTTCTCGCCGACGTGCCGAACGTGTCGT
GGGACATGGTTGGCGGGCTGGACAAGATCAGGCAGACGCTGATCGAGGCGGTGGTCTGGCCGATCCTGCATGCCGACCGG
TTTGCCGCGCTCAACCTGCAGCCCGCCAAGGGCGTCCTGCTGCATGGCGCGCCGGGAACGGGCAAGACGCTGCTGGCCAA
GGCGCTGGCGACGGAAGCAGGCGTCAACTTCATTTCCGTTCGCGGCCCGCAGCTCCTGAATCAGTTCCTCGGAGAATCCG
AGCGCGCCGTCCGCGACGTGTTCTCCCGCGCGCGCTCCTCCGCGCCGACCATCATTTTCTTCGACGAGATCGATGCCATC
GCGCCCGCGCGCAGCGGCACGGACGGCGGCACGATGGACCGCATCGTCTCGCAGCTCCTGACCGAGATCGACGGCATCGA
GGAATTCAAGAACGTGTTCCTGCTCGGCGCGACGAATCGCATCGATTGCGTCGATCCGGCGCTGCTGCGGCCGGGCCGTT
TCGACCACATCATCCAGATGCCGCTGCCGGATGCCGCGGCCCGACAAGCCATCCTCGCCATCTATGTGTCGAAGGTGGCC
GTCACTCCCGATGTGCGCATCGAGCATCTGGCGATGCGCACATCGGGCTACACGGGCGCCGAGCTCGCCAATCTCGTTCA
TACCGCTGCGCGCGCCTGCCTGAGGCGCAGCGTCGATGCCGACAGCTTCGAGCCGGTGCTCGGGGCGGAGGACTTCGAGG
CTGCGTTCGCGGCCGTCGACCGGCGCCCGCCGGCGCTTCAGGAGCAAAGGGAAACGTCGCGATGA

Upstream 100 bases:

>100_bases
TCAAGGGCGAGCTCACCGAGGAAGAGTTCGAGACCATCGAGATCGACCTGGTCCGGCGGCTGCAGGCCGCGGCTGAGCGG
ATGGCGGCGGGGGAAAAGAA

Downstream 100 bases:

>100_bases
GCCTTCGACTTGTCGGCATCACGGATGCAGCGACGGCCCGCCGCATCGAGCTCGGTCGCGACGCGGGCGATCTCGAAGGT
GTCAAGCTGATCGAGGCTTG

Product: putative vesicle-fusing ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MITDAQRAAGTELTRVVKEAAAGVVGRGIVRIDPADARLLGMVAGDVARIRGNRETHARILFLNESLRGKGIVVLDGIIR
RNAGVQIGESVTLSLAQPNAATSVTLSVTGASLSSGGKSRVVAALEHIPITAGDSIRLPLMGGNSTSCEVTATRPSGPVL
ITTETRLDISAREVGDADRSITYEDLGGVDQELQRVREMVELPLRQPELFERVGIDPPRGILFSGPPGTGKTLLARAIAY
ENKCSFFQISGPEIVAKHYGESEAQLRSVFEQARAKAPSIVFLDELDAIAPKREGLSGDRQVERRIVGQLLTLMDGIRSR
GAVTVIGATNLPDSIDPALRRPGRFDREIRFGAPDQQGRRQILEVHSKTMPLSQDVDLDHIARISHGYVGADLAALCREA
GMAALRRVAKLTGAIEDVDVGSLFVTAADFDTGFAETRPSALREFLADVPNVSWDMVGGLDKIRQTLIEAVVWPILHADR
FAALNLQPAKGVLLHGAPGTGKTLLAKALATEAGVNFISVRGPQLLNQFLGESERAVRDVFSRARSSAPTIIFFDEIDAI
APARSGTDGGTMDRIVSQLLTEIDGIEEFKNVFLLGATNRIDCVDPALLRPGRFDHIIQMPLPDAAARQAILAIYVSKVA
VTPDVRIEHLAMRTSGYTGAELANLVHTAARACLRRSVDADSFEPVLGAEDFEAAFAAVDRRPPALQEQRETSR

Sequences:

>Translated_714_residues
MITDAQRAAGTELTRVVKEAAAGVVGRGIVRIDPADARLLGMVAGDVARIRGNRETHARILFLNESLRGKGIVVLDGIIR
RNAGVQIGESVTLSLAQPNAATSVTLSVTGASLSSGGKSRVVAALEHIPITAGDSIRLPLMGGNSTSCEVTATRPSGPVL
ITTETRLDISAREVGDADRSITYEDLGGVDQELQRVREMVELPLRQPELFERVGIDPPRGILFSGPPGTGKTLLARAIAY
ENKCSFFQISGPEIVAKHYGESEAQLRSVFEQARAKAPSIVFLDELDAIAPKREGLSGDRQVERRIVGQLLTLMDGIRSR
GAVTVIGATNLPDSIDPALRRPGRFDREIRFGAPDQQGRRQILEVHSKTMPLSQDVDLDHIARISHGYVGADLAALCREA
GMAALRRVAKLTGAIEDVDVGSLFVTAADFDTGFAETRPSALREFLADVPNVSWDMVGGLDKIRQTLIEAVVWPILHADR
FAALNLQPAKGVLLHGAPGTGKTLLAKALATEAGVNFISVRGPQLLNQFLGESERAVRDVFSRARSSAPTIIFFDEIDAI
APARSGTDGGTMDRIVSQLLTEIDGIEEFKNVFLLGATNRIDCVDPALLRPGRFDHIIQMPLPDAAARQAILAIYVSKVA
VTPDVRIEHLAMRTSGYTGAELANLVHTAARACLRRSVDADSFEPVLGAEDFEAAFAAVDRRPPALQEQRETSR
>Mature_714_residues
MITDAQRAAGTELTRVVKEAAAGVVGRGIVRIDPADARLLGMVAGDVARIRGNRETHARILFLNESLRGKGIVVLDGIIR
RNAGVQIGESVTLSLAQPNAATSVTLSVTGASLSSGGKSRVVAALEHIPITAGDSIRLPLMGGNSTSCEVTATRPSGPVL
ITTETRLDISAREVGDADRSITYEDLGGVDQELQRVREMVELPLRQPELFERVGIDPPRGILFSGPPGTGKTLLARAIAY
ENKCSFFQISGPEIVAKHYGESEAQLRSVFEQARAKAPSIVFLDELDAIAPKREGLSGDRQVERRIVGQLLTLMDGIRSR
GAVTVIGATNLPDSIDPALRRPGRFDREIRFGAPDQQGRRQILEVHSKTMPLSQDVDLDHIARISHGYVGADLAALCREA
GMAALRRVAKLTGAIEDVDVGSLFVTAADFDTGFAETRPSALREFLADVPNVSWDMVGGLDKIRQTLIEAVVWPILHADR
FAALNLQPAKGVLLHGAPGTGKTLLAKALATEAGVNFISVRGPQLLNQFLGESERAVRDVFSRARSSAPTIIFFDEIDAI
APARSGTDGGTMDRIVSQLLTEIDGIEEFKNVFLLGATNRIDCVDPALLRPGRFDHIIQMPLPDAAARQAILAIYVSKVA
VTPDVRIEHLAMRTSGYTGAELANLVHTAARACLRRSVDADSFEPVLGAEDFEAAFAAVDRRPPALQEQRETSR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=657, Percent_Identity=44.7488584474886, Blast_Score=549, Evalue=1e-156,
Organism=Homo sapiens, GI157671927, Length=547, Percent_Identity=48.0804387568556, Blast_Score=520, Evalue=1e-147,
Organism=Homo sapiens, GI45643123, Length=579, Percent_Identity=45.0777202072539, Blast_Score=462, Evalue=1e-130,
Organism=Homo sapiens, GI45643125, Length=579, Percent_Identity=45.0777202072539, Blast_Score=462, Evalue=1e-130,
Organism=Homo sapiens, GI229577436, Length=549, Percent_Identity=40.4371584699454, Blast_Score=378, Evalue=1e-105,
Organism=Homo sapiens, GI194018488, Length=512, Percent_Identity=35.9375, Blast_Score=273, Evalue=6e-73,
Organism=Homo sapiens, GI4505725, Length=475, Percent_Identity=34.7368421052632, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI153792536, Length=279, Percent_Identity=45.8781362007168, Blast_Score=239, Evalue=7e-63,
Organism=Homo sapiens, GI24497618, Length=277, Percent_Identity=45.4873646209386, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI195539395, Length=229, Percent_Identity=46.2882096069869, Blast_Score=221, Evalue=3e-57,
Organism=Homo sapiens, GI24430151, Length=235, Percent_Identity=45.531914893617, Blast_Score=219, Evalue=8e-57,
Organism=Homo sapiens, GI21361144, Length=270, Percent_Identity=43.3333333333333, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI24497435, Length=227, Percent_Identity=47.136563876652, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4506209, Length=228, Percent_Identity=43.859649122807, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI5729991, Length=349, Percent_Identity=36.1031518624642, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI89064750, Length=349, Percent_Identity=36.1031518624642, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI24430155, Length=358, Percent_Identity=35.7541899441341, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI156564401, Length=454, Percent_Identity=33.7004405286344, Blast_Score=187, Evalue=4e-47,
Organism=Homo sapiens, GI7657689, Length=226, Percent_Identity=40.7079646017699, Blast_Score=174, Evalue=4e-43,
Organism=Homo sapiens, GI21327685, Length=226, Percent_Identity=40.7079646017699, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI5901990, Length=244, Percent_Identity=38.5245901639344, Blast_Score=173, Evalue=6e-43,
Organism=Homo sapiens, GI300192933, Length=234, Percent_Identity=38.4615384615385, Blast_Score=172, Evalue=9e-43,
Organism=Homo sapiens, GI4507173, Length=236, Percent_Identity=40.2542372881356, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI14149767, Length=252, Percent_Identity=38.4920634920635, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI62177112, Length=252, Percent_Identity=38.4920634920635, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI226371754, Length=286, Percent_Identity=36.013986013986, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI310125282, Length=276, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=5e-39,
Organism=Homo sapiens, GI310125280, Length=266, Percent_Identity=40.2255639097744, Blast_Score=160, Evalue=5e-39,
Organism=Homo sapiens, GI31742536, Length=324, Percent_Identity=31.1728395061728, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI112789543, Length=324, Percent_Identity=31.1728395061728, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI7019569, Length=238, Percent_Identity=36.1344537815126, Blast_Score=154, Evalue=3e-37,
Organism=Homo sapiens, GI40806170, Length=273, Percent_Identity=35.1648351648352, Blast_Score=150, Evalue=5e-36,
Organism=Homo sapiens, GI11875211, Length=273, Percent_Identity=35.1648351648352, Blast_Score=150, Evalue=5e-36,
Organism=Homo sapiens, GI17865802, Length=242, Percent_Identity=36.3636363636364, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI31377644, Length=256, Percent_Identity=33.203125, Blast_Score=148, Evalue=2e-35,
Organism=Homo sapiens, GI64084766, Length=266, Percent_Identity=28.9473684210526, Blast_Score=125, Evalue=2e-28,
Organism=Homo sapiens, GI40806173, Length=144, Percent_Identity=41.6666666666667, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI116292174, Length=256, Percent_Identity=30.078125, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI11321607, Length=203, Percent_Identity=30.5418719211823, Blast_Score=78, Evalue=3e-14,
Organism=Escherichia coli, GI1789568, Length=248, Percent_Identity=44.3548387096774, Blast_Score=206, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17532375, Length=671, Percent_Identity=42.4739195230999, Blast_Score=539, Evalue=1e-153,
Organism=Caenorhabditis elegans, GI17531535, Length=676, Percent_Identity=42.4556213017751, Blast_Score=535, Evalue=1e-152,
Organism=Caenorhabditis elegans, GI17537217, Length=612, Percent_Identity=39.3790849673203, Blast_Score=387, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17508053, Length=523, Percent_Identity=34.9904397705545, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI193206116, Length=278, Percent_Identity=44.9640287769784, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI71987364, Length=229, Percent_Identity=48.9082969432314, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI71987372, Length=229, Percent_Identity=48.9082969432314, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI133931034, Length=278, Percent_Identity=44.9640287769784, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI193206114, Length=278, Percent_Identity=44.9640287769784, Blast_Score=232, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI17554786, Length=227, Percent_Identity=47.5770925110132, Blast_Score=220, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17562804, Length=468, Percent_Identity=30.3418803418803, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI25144281, Length=227, Percent_Identity=47.5770925110132, Blast_Score=219, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI25144278, Length=227, Percent_Identity=47.5770925110132, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17563250, Length=227, Percent_Identity=45.374449339207, Blast_Score=215, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17563248, Length=229, Percent_Identity=43.6681222707424, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17554784, Length=334, Percent_Identity=40.1197604790419, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI25153574, Length=470, Percent_Identity=30, Blast_Score=205, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI17508701, Length=229, Percent_Identity=43.2314410480349, Blast_Score=205, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17505546, Length=234, Percent_Identity=42.7350427350427, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI193209502, Length=214, Percent_Identity=44.392523364486, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI133901658, Length=420, Percent_Identity=32.3809523809524, Blast_Score=172, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI133901662, Length=420, Percent_Identity=32.3809523809524, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI86561515, Length=242, Percent_Identity=39.2561983471074, Blast_Score=158, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17508421, Length=276, Percent_Identity=36.231884057971, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25146157, Length=278, Percent_Identity=34.5323741007194, Blast_Score=156, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI32563584, Length=279, Percent_Identity=35.84229390681, Blast_Score=156, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17554264, Length=204, Percent_Identity=40.6862745098039, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI71994521, Length=267, Percent_Identity=34.0823970037453, Blast_Score=146, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI115534323, Length=245, Percent_Identity=35.5102040816327, Blast_Score=145, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI17560432, Length=274, Percent_Identity=33.5766423357664, Blast_Score=141, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17541224, Length=272, Percent_Identity=31.9852941176471, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17541226, Length=271, Percent_Identity=32.1033210332103, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71990294, Length=196, Percent_Identity=30.1020408163265, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=675, Percent_Identity=43.7037037037037, Blast_Score=560, Evalue=1e-160,
Organism=Saccharomyces cerevisiae, GI6323429, Length=526, Percent_Identity=45.2471482889734, Blast_Score=464, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6322994, Length=558, Percent_Identity=39.6057347670251, Blast_Score=396, Evalue=1e-111,
Organism=Saccharomyces cerevisiae, GI6321709, Length=276, Percent_Identity=45.2898550724638, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6324000, Length=449, Percent_Identity=33.8530066815145, Blast_Score=226, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6322651, Length=504, Percent_Identity=30.1587301587302, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6322704, Length=228, Percent_Identity=45.6140350877193, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321390, Length=227, Percent_Identity=45.374449339207, Blast_Score=214, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6320197, Length=233, Percent_Identity=44.6351931330472, Blast_Score=213, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6320602, Length=230, Percent_Identity=47.8260869565217, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6324691, Length=269, Percent_Identity=41.635687732342, Blast_Score=201, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6324833, Length=229, Percent_Identity=42.7947598253275, Blast_Score=201, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6325281, Length=265, Percent_Identity=39.2452830188679, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6320854, Length=262, Percent_Identity=39.6946564885496, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6323736, Length=235, Percent_Identity=40.8510638297872, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6319554, Length=411, Percent_Identity=30.9002433090024, Blast_Score=172, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6325431, Length=250, Percent_Identity=38.4, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6325183, Length=293, Percent_Identity=36.1774744027304, Blast_Score=154, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321465, Length=268, Percent_Identity=35.4477611940299, Blast_Score=153, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320887, Length=250, Percent_Identity=34.8, Blast_Score=140, Evalue=5e-34,
Organism=Drosophila melanogaster, GI17137560, Length=675, Percent_Identity=42.6666666666667, Blast_Score=543, Evalue=1e-154,
Organism=Drosophila melanogaster, GI161076486, Length=675, Percent_Identity=42.6666666666667, Blast_Score=543, Evalue=1e-154,
Organism=Drosophila melanogaster, GI161076488, Length=664, Percent_Identity=43.0722891566265, Blast_Score=543, Evalue=1e-154,
Organism=Drosophila melanogaster, GI19921202, Length=577, Percent_Identity=35.8752166377816, Blast_Score=347, Evalue=1e-95,
Organism=Drosophila melanogaster, GI24660075, Length=265, Percent_Identity=48.6792452830189, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI281365776, Length=265, Percent_Identity=48.6792452830189, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI45552965, Length=265, Percent_Identity=48.6792452830189, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24656825, Length=497, Percent_Identity=32.9979879275654, Blast_Score=240, Evalue=3e-63,
Organism=Drosophila melanogaster, GI21355121, Length=468, Percent_Identity=32.2649572649573, Blast_Score=233, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24656820, Length=516, Percent_Identity=31.5891472868217, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI281363136, Length=500, Percent_Identity=32.2, Blast_Score=222, Evalue=7e-58,
Organism=Drosophila melanogaster, GI78707192, Length=500, Percent_Identity=32.2, Blast_Score=222, Evalue=7e-58,
Organism=Drosophila melanogaster, GI17137738, Length=228, Percent_Identity=44.7368421052632, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI19920408, Length=227, Percent_Identity=46.2555066079295, Blast_Score=221, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24651451, Length=226, Percent_Identity=46.4601769911504, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI18860063, Length=261, Percent_Identity=44.0613026819923, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24649446, Length=235, Percent_Identity=45.1063829787234, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24652279, Length=199, Percent_Identity=49.748743718593, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24640100, Length=241, Percent_Identity=45.2282157676349, Blast_Score=215, Evalue=8e-56,
Organism=Drosophila melanogaster, GI17738151, Length=272, Percent_Identity=42.2794117647059, Blast_Score=215, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24663015, Length=256, Percent_Identity=42.96875, Blast_Score=209, Evalue=5e-54,
Organism=Drosophila melanogaster, GI281361487, Length=363, Percent_Identity=35.2617079889807, Blast_Score=209, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24658770, Length=232, Percent_Identity=41.8103448275862, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24644145, Length=289, Percent_Identity=36.3321799307958, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI28573010, Length=481, Percent_Identity=31.6008316008316, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI17864540, Length=407, Percent_Identity=32.1867321867322, Blast_Score=173, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28574878, Length=234, Percent_Identity=40.5982905982906, Blast_Score=163, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24665814, Length=239, Percent_Identity=40.5857740585774, Blast_Score=162, Evalue=8e-40,
Organism=Drosophila melanogaster, GI24639391, Length=237, Percent_Identity=36.7088607594937, Blast_Score=162, Evalue=8e-40,
Organism=Drosophila melanogaster, GI18859657, Length=242, Percent_Identity=38.8429752066116, Blast_Score=160, Evalue=4e-39,
Organism=Drosophila melanogaster, GI281360146, Length=233, Percent_Identity=38.6266094420601, Blast_Score=158, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360138, Length=233, Percent_Identity=38.6266094420601, Blast_Score=158, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360144, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360140, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360142, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI21357333, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360136, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24644411, Length=233, Percent_Identity=38.6266094420601, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24581396, Length=271, Percent_Identity=34.6863468634686, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI20129423, Length=251, Percent_Identity=33.4661354581673, Blast_Score=152, Evalue=9e-37,
Organism=Drosophila melanogaster, GI20129529, Length=251, Percent_Identity=35.4581673306773, Blast_Score=149, Evalue=9e-36,
Organism=Drosophila melanogaster, GI28571849, Length=291, Percent_Identity=32.3024054982818, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI28571847, Length=291, Percent_Identity=32.3024054982818, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24639486, Length=311, Percent_Identity=29.5819935691318, Blast_Score=134, Evalue=3e-31,
Organism=Drosophila melanogaster, GI45554047, Length=171, Percent_Identity=35.0877192982456, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 76718; Mature: 76718

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDAQRAAGTELTRVVKEAAAGVVGRGIVRIDPADARLLGMVAGDVARIRGNRETHARI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
LFLNESLRGKGIVVLDGIIRRNAGVQIGESVTLSLAQPNAATSVTLSVTGASLSSGGKSR
EEEECCCCCCCEEEECHHHHCCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCCCCHHH
VVAALEHIPITAGDSIRLPLMGGNSTSCEVTATRPSGPVLITTETRLDISAREVGDADRS
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCC
ITYEDLGGVDQELQRVREMVELPLRQPELFERVGIDPPRGILFSGPPGTGKTLLARAIAY
EEHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHH
ENKCSFFQISGPEIVAKHYGESEAQLRSVFEQARAKAPSIVFLDELDAIAPKREGLSGDR
CCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHH
QVERRIVGQLLTLMDGIRSRGAVTVIGATNLPDSIDPALRRPGRFDREIRFGAPDQQGRR
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCHHHHH
QILEVHSKTMPLSQDVDLDHIARISHGYVGADLAALCREAGMAALRRVAKLTGAIEDVDV
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GSLFVTAADFDTGFAETRPSALREFLADVPNVSWDMVGGLDKIRQTLIEAVVWPILHADR
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
FAALNLQPAKGVLLHGAPGTGKTLLAKALATEAGVNFISVRGPQLLNQFLGESERAVRDV
EEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHH
FSRARSSAPTIIFFDEIDAIAPARSGTDGGTMDRIVSQLLTEIDGIEEFKNVFLLGATNR
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEECCCC
IDCVDPALLRPGRFDHIIQMPLPDAAARQAILAIYVSKVAVTPDVRIEHLAMRTSGYTGA
CCCCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEHEEEECCCCCHH
ELANLVHTAARACLRRSVDADSFEPVLGAEDFEAAFAAVDRRPPALQEQRETSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MITDAQRAAGTELTRVVKEAAAGVVGRGIVRIDPADARLLGMVAGDVARIRGNRETHARI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
LFLNESLRGKGIVVLDGIIRRNAGVQIGESVTLSLAQPNAATSVTLSVTGASLSSGGKSR
EEEECCCCCCCEEEECHHHHCCCCCEECCCEEEEEECCCCCCEEEEEEECCCCCCCCHHH
VVAALEHIPITAGDSIRLPLMGGNSTSCEVTATRPSGPVLITTETRLDISAREVGDADRS
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCC
ITYEDLGGVDQELQRVREMVELPLRQPELFERVGIDPPRGILFSGPPGTGKTLLARAIAY
EEHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHH
ENKCSFFQISGPEIVAKHYGESEAQLRSVFEQARAKAPSIVFLDELDAIAPKREGLSGDR
CCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHH
QVERRIVGQLLTLMDGIRSRGAVTVIGATNLPDSIDPALRRPGRFDREIRFGAPDQQGRR
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCHHHHH
QILEVHSKTMPLSQDVDLDHIARISHGYVGADLAALCREAGMAALRRVAKLTGAIEDVDV
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GSLFVTAADFDTGFAETRPSALREFLADVPNVSWDMVGGLDKIRQTLIEAVVWPILHADR
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
FAALNLQPAKGVLLHGAPGTGKTLLAKALATEAGVNFISVRGPQLLNQFLGESERAVRDV
EEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHH
FSRARSSAPTIIFFDEIDAIAPARSGTDGGTMDRIVSQLLTEIDGIEEFKNVFLLGATNR
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEECCCC
IDCVDPALLRPGRFDHIIQMPLPDAAARQAILAIYVSKVAVTPDVRIEHLAMRTSGYTGA
CCCCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEHEEEECCCCCHH
ELANLVHTAARACLRRSVDADSFEPVLGAEDFEAAFAAVDRRPPALQEQRETSR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]