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The map label for this gene is gvpS [H]

Identifier: 146338361

GI number: 146338361

Start: 1358093

End: 1358392

Strand: Direct

Name: gvpS [H]

Synonym: BRADO1270

Alternate gene names: 146338361

Gene position: 1358093-1358392 (Clockwise)

Preceding gene: 146338360

Following gene: 146338362

Centisome position: 18.21

GC content: 61.0

Gene sequence:

>300_bases
ATGCAGCACTCGATACGATCCGACGGGCTCGCCGACATTCTGGAACGGGTGCTGGACAAGGGCATCGTGATCGCCGGCGA
CATCTCGGTCTCGCTCGTCGGGATCGAACTGCTGACCATCCGCCTTCGTCTTCTGGTGACGACGGTCGATAAGGCGAAGG
AGATCGGCATCAATTGGTGGGAGAGCGATCCCATGTTGTCCGGCAAGACCAGCGGCCTCGAGGATGAGAACCGCAGGCTG
CGCGGCCGGCTCGCCATTCTTGAAAAGCGCATGGAAGGCATGGTCGTTCCGTCGACCTGA

Upstream 100 bases:

>100_bases
ATCGCCCGCTACCTGATGAAGTTCAGCGAGACCGGAGAAGTGATGGCGTTCGAGCGAGTATCGCGTGCGCTGAGATCAGC
AGGCTGATCAGGAGCGGCCC

Downstream 100 bases:

>100_bases
TCAACGAACAAAAGAGGAGAGTCAAACATGAAGCGGCGGTCCGACGACGACCTCTCCGGGTTCAAGTCACTCGAAGAGAT
GGGCAGGCGATTGGGCGATC

Product: gas vesicle synthesis protein GvpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MQHSIRSDGLADILERVLDKGIVIAGDISVSLVGIELLTIRLRLLVTTVDKAKEIGINWWESDPMLSGKTSGLEDENRRL
RGRLAILEKRMEGMVVPST

Sequences:

>Translated_99_residues
MQHSIRSDGLADILERVLDKGIVIAGDISVSLVGIELLTIRLRLLVTTVDKAKEIGINWWESDPMLSGKTSGLEDENRRL
RGRLAILEKRMEGMVVPST
>Mature_99_residues
MQHSIRSDGLADILERVLDKGIVIAGDISVSLVGIELLTIRLRLLVTTVDKAKEIGINWWESDPMLSGKTSGLEDENRRL
RGRLAILEKRMEGMVVPST

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 10997; Mature: 10997

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHSIRSDGLADILERVLDKGIVIAGDISVSLVGIELLTIRLRLLVTTVDKAKEIGINWW
CCCCCCCCCHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
ESDPMLSGKTSGLEDENRRLRGRLAILEKRMEGMVVPST
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCC
>Mature Secondary Structure
MQHSIRSDGLADILERVLDKGIVIAGDISVSLVGIELLTIRLRLLVTTVDKAKEIGINWW
CCCCCCCCCHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
ESDPMLSGKTSGLEDENRRLRGRLAILEKRMEGMVVPST
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063646 [H]