| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338342
Identifier: 146338342
GI number: 146338342
Start: 1333740
End: 1335935
Strand: Reverse
Name: 146338342
Synonym: BRADO1250
Alternate gene names: NA
Gene position: 1335935-1333740 (Counterclockwise)
Preceding gene: 146338343
Following gene: 146338338
Centisome position: 17.92
GC content: 59.93
Gene sequence:
>2196_bases ATGACCAGCAAAGAAGCCGCTCCCTCGCAAGCAATCAGTGCAAAATATGTCGGTCCATACGAGCGCTGGAACTTCGGCTA CGGCAGACCATTCGCCTTTCCGGGACTCCGCAACTGGAAATACTTGACCGCGCTGACCGAAATCCCGAAGCGTGCCAACG TCGTCCATGTCGCCAATGGCGGCGTGAGCAAAATCTGGTTTCCGACCCTTTGGAAGGAGACCGGTCCCAACGTCGACCTG ACCTTCGCGCCGTTTGTCATCGAGAACACGGACGATCAAATACCCATTCTGGAAGGTCTGATTTCTCTTCTTGAGGGCGT AATCCCTCAACTTGTCTCTTTCCTGACGAATACATTGGGGATCCTCGACATCAGCAAACCTCGATTTCGTCTGGCCTTCC CGGTGCCAGATTGTGCCATGCACAACTGCATGACTCAGCTGCCAGCAGATCCCCATCCCCGTCAGGAACTGCCTCCCGGC GACGGCACCAGGCAGATCACGGTGATTGCCCTGATCGACGACGGCCTGCCATTTGCGCATCGTAATTTCCGCAACGCCAA TGGCAATACGCGGGTCGAGTATTGCTGGCTGCAGTCCGTCGAAAAATGCGAGAGCCAGAACACCGTCCTGTTCGGCCGCG AATACGATCGAGCGGAGATCGATGCTCTGATCCGAAACCATGGCGACGACGAGGACACGCTCTATCGGGCGGCAGGAGCG ACCCTCAACACGGAGGAATTCCCATTTCTGGCCCGCCACGCCACGCACGGCGCGCACGTCATGGATCTTGCCACCGGCTA CGCCCCCGAGCGCAAGGACAGGACGCCGGACGAAATCCGCATCATTGCAGTCCAGTTGCCGAATACGATCGCATTCGACA CGTCGGGTTTCGGCAAGGACATGTACATGTTGTCGGCCTTTCACTATGTCTTCAATCGCGCCGACATTATTGCGCAGAGA TATGGCGCCAAGAATCTGCGCCTCGTCATCAACTTCAGTTATGGATTTTCCGGCGGCCCGCACGACGGCGGACTCGAATT GGAAGCGGCGATCGACGAGTTGATCGAGGCCCGCCGGCGTCGGCAAGCAAGATCGGACGACTCTCTGTTCGGACCTAGTC CGACAGCGCTCGTCCTGCCGTCAGGCAATACCTTCCTCGAGCGAACCCATGGCGTGATCCCTCCACCGTCCGAGGACGAG GAGCCCCTCGAGGTCCGATGGCGCCTGCAGCCGAACGGCCGCACGCCGAGTTATCTCGAGCTTTGGTTTGGCAAATCCTT CGACCCGGTCGGATACGTCGTCGACGTCTGGGATCCTGGCAACACCTTGCGCAAGTCCCTGACATTCACCCGCGAGGACA CTGTACAGAACGGGGAGGGCGATCAAATCAAGCCGGGCGATATTTATCAGGGTGACATTGCCGTTGTAGGCCAAGTGAGT TTCGATCTGCACAGGGGCAATCGCTGGCGCCTGCTCGTCGTGCTCGGGCCGACAGAGCCTGAGCCTGTGTGTGTGCCGCC CGTCATGAGTGGCGAATGGAGAGTGGTGATCAGGCGAGGCCCCCAAGCAGGCTCCATCAACGAGCCGGTCCATTGCTGGA TCCAACGGGCAGCCGATCCTGAAAGTCTGCGCTCGGGAAGCCGCCAAAGCTATTTCGACGATGCGGGCAATATCCGGTAC ACGCGGCGGGGCGATCTCCGTGAAGCGGATAGCCCGGGTGCGTTCGTCCGCCGTTTCGGAAGCCTGAATGGCATCGCGAC CGGAGCGACGTCCCTGGTCGTTGGCGGCTATCGGCTCGGCCAAGGGCTTGGCTCCAGCCTGAAAGACGCCCGGCCCTCCC GCTATAGTTCGGCCGGCTCGCGGGATCAGGACTGGCAGCTCGGACGTGTCGACTGCTCATCGATGTCCGACCGTTCTCGT GTCCTGCCAGGCACGATCGCAGCCGGCGTACGCAGCGGATCGCGCTCTCATCTGCAAGGGACCAGCGCAGCCGCGCCTTT GGTAGCCCGGCAACTTGCCGAGATCTTCTCGACTGCACCAGACGAGGATATTCGTCGCGCAGAACGCGAAAACTATCTTC CCCTGCTGCACGACAAGTATCCTTCCGATCCTGCCCCACTGACCGGAGTCCGTCTCGGCAAGGTTCTTGTCCCACCACAT CAGCAGCCGGGAATTGAACCGATAAGTTCGCGTTAG
Upstream 100 bases:
>100_bases ACGATTGCAAGAGACATGCGAGGTCGATCGGAGTGAGCTTTTCCAATGGCTGTGGGGAAAGGCCACCCACGAGTTTGCGC TCAAACGATAGGGTGGCTCA
Downstream 100 bases:
>100_bases CACTTTGGGCGCGGATCACTCATGCTGGTTCAACGTGCGAGACGACGTGTGCACAGAGGACTAAACTTGTCCCCGACTGC GCTCAGATGCCCGGTCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MTSKEAAPSQAISAKYVGPYERWNFGYGRPFAFPGLRNWKYLTALTEIPKRANVVHVANGGVSKIWFPTLWKETGPNVDL TFAPFVIENTDDQIPILEGLISLLEGVIPQLVSFLTNTLGILDISKPRFRLAFPVPDCAMHNCMTQLPADPHPRQELPPG DGTRQITVIALIDDGLPFAHRNFRNANGNTRVEYCWLQSVEKCESQNTVLFGREYDRAEIDALIRNHGDDEDTLYRAAGA TLNTEEFPFLARHATHGAHVMDLATGYAPERKDRTPDEIRIIAVQLPNTIAFDTSGFGKDMYMLSAFHYVFNRADIIAQR YGAKNLRLVINFSYGFSGGPHDGGLELEAAIDELIEARRRRQARSDDSLFGPSPTALVLPSGNTFLERTHGVIPPPSEDE EPLEVRWRLQPNGRTPSYLELWFGKSFDPVGYVVDVWDPGNTLRKSLTFTREDTVQNGEGDQIKPGDIYQGDIAVVGQVS FDLHRGNRWRLLVVLGPTEPEPVCVPPVMSGEWRVVIRRGPQAGSINEPVHCWIQRAADPESLRSGSRQSYFDDAGNIRY TRRGDLREADSPGAFVRRFGSLNGIATGATSLVVGGYRLGQGLGSSLKDARPSRYSSAGSRDQDWQLGRVDCSSMSDRSR VLPGTIAAGVRSGSRSHLQGTSAAAPLVARQLAEIFSTAPDEDIRRAERENYLPLLHDKYPSDPAPLTGVRLGKVLVPPH QQPGIEPISSR
Sequences:
>Translated_731_residues MTSKEAAPSQAISAKYVGPYERWNFGYGRPFAFPGLRNWKYLTALTEIPKRANVVHVANGGVSKIWFPTLWKETGPNVDL TFAPFVIENTDDQIPILEGLISLLEGVIPQLVSFLTNTLGILDISKPRFRLAFPVPDCAMHNCMTQLPADPHPRQELPPG DGTRQITVIALIDDGLPFAHRNFRNANGNTRVEYCWLQSVEKCESQNTVLFGREYDRAEIDALIRNHGDDEDTLYRAAGA TLNTEEFPFLARHATHGAHVMDLATGYAPERKDRTPDEIRIIAVQLPNTIAFDTSGFGKDMYMLSAFHYVFNRADIIAQR YGAKNLRLVINFSYGFSGGPHDGGLELEAAIDELIEARRRRQARSDDSLFGPSPTALVLPSGNTFLERTHGVIPPPSEDE EPLEVRWRLQPNGRTPSYLELWFGKSFDPVGYVVDVWDPGNTLRKSLTFTREDTVQNGEGDQIKPGDIYQGDIAVVGQVS FDLHRGNRWRLLVVLGPTEPEPVCVPPVMSGEWRVVIRRGPQAGSINEPVHCWIQRAADPESLRSGSRQSYFDDAGNIRY TRRGDLREADSPGAFVRRFGSLNGIATGATSLVVGGYRLGQGLGSSLKDARPSRYSSAGSRDQDWQLGRVDCSSMSDRSR VLPGTIAAGVRSGSRSHLQGTSAAAPLVARQLAEIFSTAPDEDIRRAERENYLPLLHDKYPSDPAPLTGVRLGKVLVPPH QQPGIEPISSR >Mature_730_residues TSKEAAPSQAISAKYVGPYERWNFGYGRPFAFPGLRNWKYLTALTEIPKRANVVHVANGGVSKIWFPTLWKETGPNVDLT FAPFVIENTDDQIPILEGLISLLEGVIPQLVSFLTNTLGILDISKPRFRLAFPVPDCAMHNCMTQLPADPHPRQELPPGD GTRQITVIALIDDGLPFAHRNFRNANGNTRVEYCWLQSVEKCESQNTVLFGREYDRAEIDALIRNHGDDEDTLYRAAGAT LNTEEFPFLARHATHGAHVMDLATGYAPERKDRTPDEIRIIAVQLPNTIAFDTSGFGKDMYMLSAFHYVFNRADIIAQRY GAKNLRLVINFSYGFSGGPHDGGLELEAAIDELIEARRRRQARSDDSLFGPSPTALVLPSGNTFLERTHGVIPPPSEDEE PLEVRWRLQPNGRTPSYLELWFGKSFDPVGYVVDVWDPGNTLRKSLTFTREDTVQNGEGDQIKPGDIYQGDIAVVGQVSF DLHRGNRWRLLVVLGPTEPEPVCVPPVMSGEWRVVIRRGPQAGSINEPVHCWIQRAADPESLRSGSRQSYFDDAGNIRYT RRGDLREADSPGAFVRRFGSLNGIATGATSLVVGGYRLGQGLGSSLKDARPSRYSSAGSRDQDWQLGRVDCSSMSDRSRV LPGTIAAGVRSGSRSHLQGTSAAAPLVARQLAEIFSTAPDEDIRRAERENYLPLLHDKYPSDPAPLTGVRLGKVLVPPHQ QPGIEPISSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80915; Mature: 80784
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKEAAPSQAISAKYVGPYERWNFGYGRPFAFPGLRNWKYLTALTEIPKRANVVHVANG CCCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECC GVSKIWFPTLWKETGPNVDLTFAPFVIENTDDQIPILEGLISLLEGVIPQLVSFLTNTLG CCCEEECHHHHHCCCCCEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE ILDISKPRFRLAFPVPDCAMHNCMTQLPADPHPRQELPPGDGTRQITVIALIDDGLPFAH EEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHH RNFRNANGNTRVEYCWLQSVEKCESQNTVLFGREYDRAEIDALIRNHGDDEDTLYRAAGA CCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCC TLNTEEFPFLARHATHGAHVMDLATGYAPERKDRTPDEIRIIAVQLPNTIAFDTSGFGKD CCCCCCCCHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCH MYMLSAFHYVFNRADIIAQRYGAKNLRLVINFSYGFSGGPHDGGLELEAAIDELIEARRR HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHH RQARSDDSLFGPSPTALVLPSGNTFLERTHGVIPPPSEDEEPLEVRWRLQPNGRTPSYLE HHCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE LWFGKSFDPVGYVVDVWDPGNTLRKSLTFTREDTVQNGEGDQIKPGDIYQGDIAVVGQVS EECCCCCCCCCEEEEEECCCHHHHHHHCCCHHHCCCCCCCCCCCCCCEECCCEEEEEEEE FDLHRGNRWRLLVVLGPTEPEPVCVPPVMSGEWRVVIRRGPQAGSINEPVHCWIQRAADP EEEECCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCH ESLRSGSRQSYFDDAGNIRYTRRGDLREADSPGAFVRRFGSLNGIATGATSLVVGGYRLG HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEECCHHHH QGLGSSLKDARPSRYSSAGSRDQDWQLGRVDCSSMSDRSRVLPGTIAAGVRSGSRSHLQG HHCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHCCC TSAAAPLVARQLAEIFSTAPDEDIRRAERENYLPLLHDKYPSDPAPLTGVRLGKVLVPPH CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECEEEECCC QQPGIEPISSR CCCCCCCCCCC >Mature Secondary Structure TSKEAAPSQAISAKYVGPYERWNFGYGRPFAFPGLRNWKYLTALTEIPKRANVVHVANG CCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECC GVSKIWFPTLWKETGPNVDLTFAPFVIENTDDQIPILEGLISLLEGVIPQLVSFLTNTLG CCCEEECHHHHHCCCCCEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE ILDISKPRFRLAFPVPDCAMHNCMTQLPADPHPRQELPPGDGTRQITVIALIDDGLPFAH EEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHH RNFRNANGNTRVEYCWLQSVEKCESQNTVLFGREYDRAEIDALIRNHGDDEDTLYRAAGA CCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCC TLNTEEFPFLARHATHGAHVMDLATGYAPERKDRTPDEIRIIAVQLPNTIAFDTSGFGKD CCCCCCCCHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCH MYMLSAFHYVFNRADIIAQRYGAKNLRLVINFSYGFSGGPHDGGLELEAAIDELIEARRR HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHH RQARSDDSLFGPSPTALVLPSGNTFLERTHGVIPPPSEDEEPLEVRWRLQPNGRTPSYLE HHCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEE LWFGKSFDPVGYVVDVWDPGNTLRKSLTFTREDTVQNGEGDQIKPGDIYQGDIAVVGQVS EECCCCCCCCCEEEEEECCCHHHHHHHCCCHHHCCCCCCCCCCCCCCEECCCEEEEEEEE FDLHRGNRWRLLVVLGPTEPEPVCVPPVMSGEWRVVIRRGPQAGSINEPVHCWIQRAADP EEEECCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCH ESLRSGSRQSYFDDAGNIRYTRRGDLREADSPGAFVRRFGSLNGIATGATSLVVGGYRLG HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEECCHHHH QGLGSSLKDARPSRYSSAGSRDQDWQLGRVDCSSMSDRSRVLPGTIAAGVRSGSRSHLQG HHCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHCCC TSAAAPLVARQLAEIFSTAPDEDIRRAERENYLPLLHDKYPSDPAPLTGVRLGKVLVPPH CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECEEEECCC QQPGIEPISSR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA