| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338327
Identifier: 146338327
GI number: 146338327
Start: 1309378
End: 1310592
Strand: Direct
Name: 146338327
Synonym: BRADO1232
Alternate gene names: NA
Gene position: 1309378-1310592 (Clockwise)
Preceding gene: 146338325
Following gene: 146338329
Centisome position: 17.56
GC content: 67.49
Gene sequence:
>1215_bases ATGGCCGATTCACGCAACACCCAGGGCTTGACCGTTCTCGCCAACGGGTTCCGGCCGTTCTTCCTGCTCGGTGCGGTCCA GGCCGCGCTCGCCATCCTGGTCTGGCTCCCGGCCTACTATGGTGAGCTGACGCTGAACTCGGCCTTCGTGCCGCGTGACT GGCACGTGCACGAGATGCTCTATGGCTATCTGCCGGCGATCGTCACCGGCTTCCTGTTCACGGCGATCCCGAACTGGACC GGGCGTCTGCCGATCCGCGGCCTGCCGCTGCTGACGCTGGTGATCGTCTGGATTGCCGGGCGGATCGCGGTGACGACATC GATCATCGGGCCGTGGTGGGCCGATCTCCTTGTCGATGCGAGCTTCCTGGCGCTGGTCGTCCTCGCTGCCGCGCGTGAAA TCGTCGCCGGGCGCAATTGGCGTAATCTGCCGGTGGTCGCGATCGTCGGCATGCTGTGCGCCGGAAACATCGCGTTTCAT CTGGAAGCGCATCTGCGCGGCTCGGCCGATGTCGCGATTCGTATTGGCGTCGCCGTGATCGTGCTGCTGCTTGCCCTGAT CGGCGGCCGTATCACGCCGAGCTTCACGCGCAACTGGCTGGTGAAGAACCACCCGGGCAGGCTGCCTGCGCCGTTCGGCC GCTTCGACATGGCCGTCGTCCTCATCAGTGCGCTGAGCCTGCTGTCTTGGATCGTGGCTCCCGAGCGTACCGGCACTGCG CTGGCGCTCGCCGTCGCCGGTGTGCTGCATGTGATCAGATTGGCGCGCTGGGCGGGCGATCGCACGCTGCGCGAAAGGCT GCTCGTGATCCTGCATGTCGGCTACGCCTTCGTGCCGCTGGGCTTCCTGGCCACGGCGGCGGCGAGCCTCGGATGGACGC TGCCGAGCGCCGGGCTGCATGCCTGGATGGTCGGTGCCGCCGGCATCATGACGCTCGCGGTGATGACGCGCGCCACGCTC GGCCATACCGGCCAGGCCTTGACAGCCTCGGTGGCGACGCAGGCGATCTATCTCGGCATCATCGTCGCGGCGACTACGCG GGTCTGCGCCGTGCTGGTCCCGGCCCATGCCGTCGTGCTGCTGCACGTCGCGGCCTTTGCCTGGATCATCGCCTTCTCGG GCTTCGTGCTGGCGTTCGGTCCGCTGCTGCTCGGCCTCAAGCTGCGCGCGCTCGCAATCAGATCCTCGGCTGGCTCGGCT CAGCCCGTGCTCTGA
Upstream 100 bases:
>100_bases CGGCCGGAAGTTTGTGCTGGCACAACCCGCTGCGAGCGGGCCGCAACTACATCTCGATGCAGCGCCATCGGCGCGGTTCC ATCAGCGAGCGAGCATTGAC
Downstream 100 bases:
>100_bases TTGCGCGCGACGGCCCGGGAGAACACCACTTCCATCAGCGTTCCCGACTTCGGCGCCGCCTTGATGTGGAATTGCGCGCG ATTGGCCTCGACCAGCGCCT
Product: putative membrane protein, NnrS-like
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Transmembrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Heme-Cu Protein NnrS; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; NnrS Protein Superfamily
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MADSRNTQGLTVLANGFRPFFLLGAVQAALAILVWLPAYYGELTLNSAFVPRDWHVHEMLYGYLPAIVTGFLFTAIPNWT GRLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDASFLALVVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFH LEAHLRGSADVAIRIGVAVIVLLLALIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVAPERTGTA LALAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLHAWMVGAAGIMTLAVMTRATL GHTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVLLHVAAFAWIIAFSGFVLAFGPLLLGLKLRALAIRSSAGSA QPVL
Sequences:
>Translated_404_residues MADSRNTQGLTVLANGFRPFFLLGAVQAALAILVWLPAYYGELTLNSAFVPRDWHVHEMLYGYLPAIVTGFLFTAIPNWT GRLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDASFLALVVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFH LEAHLRGSADVAIRIGVAVIVLLLALIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVAPERTGTA LALAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLHAWMVGAAGIMTLAVMTRATL GHTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVLLHVAAFAWIIAFSGFVLAFGPLLLGLKLRALAIRSSAGSA QPVL >Mature_403_residues ADSRNTQGLTVLANGFRPFFLLGAVQAALAILVWLPAYYGELTLNSAFVPRDWHVHEMLYGYLPAIVTGFLFTAIPNWTG RLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDASFLALVVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFHL EAHLRGSADVAIRIGVAVIVLLLALIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVAPERTGTAL ALAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLHAWMVGAAGIMTLAVMTRATLG HTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVLLHVAAFAWIIAFSGFVLAFGPLLLGLKLRALAIRSSAGSAQ PVL
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42890; Mature: 42759
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSRNTQGLTVLANGFRPFFLLGAVQAALAILVWLPAYYGELTLNSAFVPRDWHVHEML CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHH YGYLPAIVTGFLFTAIPNWTGRLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDA HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLALVVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFHLEAHLRGSADVAIRIGVAVI HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHH VLLLALIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVAPERTGTA HHHHHHHCCCCCCCHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH LALAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AWMVGAAGIMTLAVMTRATLGHTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVAAFAWIIAFSGFVLAFGPLLLGLKLRALAIRSSAGSAQPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ADSRNTQGLTVLANGFRPFFLLGAVQAALAILVWLPAYYGELTLNSAFVPRDWHVHEML CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHH YGYLPAIVTGFLFTAIPNWTGRLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDA HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLALVVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFHLEAHLRGSADVAIRIGVAVI HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHH VLLLALIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVAPERTGTA HHHHHHHCCCCCCCHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH LALAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AWMVGAAGIMTLAVMTRATLGHTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVAAFAWIIAFSGFVLAFGPLLLGLKLRALAIRSSAGSAQPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA