| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338268
Identifier: 146338268
GI number: 146338268
Start: 1242250
End: 1243251
Strand: Direct
Name: 146338268
Synonym: BRADO1172
Alternate gene names: NA
Gene position: 1242250-1243251 (Clockwise)
Preceding gene: 146338267
Following gene: 146338269
Centisome position: 16.66
GC content: 63.17
Gene sequence:
>1002_bases ATGACGTCAGACGACCTCATGCACTTCCTACGGACGCGCAAGGGCACGGCGCTGTCCGTGGCCGCGCACGTCATCGTGCT GTGCGTGGGTCTGTTCAGCTTCTCGGCCCGGCCGATGGTGATGCCGCCCGAGGATCTGGTGCCGGTCGACGTCATCTCCG AGGACAACACCTCGAGGGCCAAGGCCGGCGCGCTGCAGGGCAAGAAGGACGCGCCGAAGCTGCTGGCCGACAAGATCGGC GAGAAGAAGCCGACCGAGGACATCGTCGGCAAGGTCGACACCAAGCAGGTCACCGAGACCGACGCGGCGCCGGAGCCCAA GCCGAAGCCGGAGAAGCCGGTCGAGAAGAAGCCCGATCCGCCGAAGCCGGTGGCCGAAAAGAAGCCGGATCCGCCGAAGC CCGCGCCGGCCGAGAAGCCGAAGCCGGAGGAGAAGAAGCCCGATCCGTTCAATCCGGACCAGATCGCCAGCGTGCTGAAC AAGGACAAGCCGAAGCCGCCGAAGCCGCAGCAGCAGGCCGATGCCACGCCCCCAGAGCCGAAGCACAAGAGCGAACGCAA GTTCGACGCCGAGAAGATGGCGAGCCTGATCAACCAGAAGGACCCGACGCGGCAGGCGGTGACGGGAGCCGAGCTGAATG CAAATGCGGCTCTCGGCTCGAGCCGGGGAATGTCCGAGGCCAACCTCGCGAGCCTACAGGGCGCCTTCAGTGCGGCGGTG AAACGCTGCTATAATTTTCCGTACAATGGTCCGGACGCCGATCAATTCTGGGCAGACGTCGATATCAATCTCCAGCCTGA CGGAAGTGTCGCTTCAATGTCCATCGTAAAGGTGGGCGGGCCCTCGCGTTCGGTTGCCAACGCGATCGCGGAGAATGGGA AGCGGGCAACGCTACAGTGCCAGGCTTACAGCTTTCTGCCCAAGCAGCAGTATGCTTTGTGGAAAATGATCCCGATGAGA TTCTGCATCGGCGATCGTGAGCAATGTGGACCGCCAAATTGA
Upstream 100 bases:
>100_bases GCGACCGCGACGCCTGCTACTCGGACATGATGAAGGTGCTGGGACTCGCGCGCGACGCCGGCTACCGCGCCAGCATCGTG GTGGTGCCGGAACAGGGCTC
Downstream 100 bases:
>100_bases AGGTAGTCGTCAAGCGATGAGCATGACCAAATTGATAACTCGGCGCCAATTCGTGATCGCTGGCGGCGCATCGATCGCTG CGATCCGTGCGGGCGGAGCC
Product: putative TonB protein
Products: NA
Alternate protein names: LA Protein; Protein lA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTSDDLMHFLRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRAKAGALQGKKDAPKLLADKIG EKKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDPPKPVAEKKPDPPKPAPAEKPKPEEKKPDPFNPDQIASVLN KDKPKPPKPQQQADATPPEPKHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAV KRCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQCQAYSFLPKQQYALWKMIPMR FCIGDREQCGPPN
Sequences:
>Translated_333_residues MTSDDLMHFLRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRAKAGALQGKKDAPKLLADKIG EKKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDPPKPVAEKKPDPPKPAPAEKPKPEEKKPDPFNPDQIASVLN KDKPKPPKPQQQADATPPEPKHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAV KRCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQCQAYSFLPKQQYALWKMIPMR FCIGDREQCGPPN >Mature_332_residues TSDDLMHFLRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRAKAGALQGKKDAPKLLADKIGE KKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDPPKPVAEKKPDPPKPAPAEKPKPEEKKPDPFNPDQIASVLNK DKPKPPKPQQQADATPPEPKHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAVK RCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQCQAYSFLPKQQYALWKMIPMRF CIGDREQCGPPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36072; Mature: 35941
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDDLMHFLRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRA CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHH KAGALQGKKDAPKLLADKIGEKKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDP HHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PKPVAEKKPDPPKPAPAEKPKPEEKKPDPFNPDQIASVLNKDKPKPPKPQQQADATPPEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCC KHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAV CCCHHHHCCHHHHHHHHCCCCCHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH KRCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQC HHHHCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEE QAYSFLPKQQYALWKMIPMRFCIGDREQCGPPN EHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCC >Mature Secondary Structure TSDDLMHFLRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHH KAGALQGKKDAPKLLADKIGEKKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDP HHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PKPVAEKKPDPPKPAPAEKPKPEEKKPDPFNPDQIASVLNKDKPKPPKPQQQADATPPEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCC KHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAV CCCHHHHCCHHHHHHHHCCCCCHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH KRCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQC HHHHCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEE QAYSFLPKQQYALWKMIPMRFCIGDREQCGPPN EHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA