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The map label for this gene is mcp2 [H]

Identifier: 146338237

GI number: 146338237

Start: 1213204

End: 1214634

Strand: Reverse

Name: mcp2 [H]

Synonym: BRADO1141

Alternate gene names: 146338237

Gene position: 1214634-1213204 (Counterclockwise)

Preceding gene: 146338238

Following gene: 146338236

Centisome position: 16.29

GC content: 68.13

Gene sequence:

>1431_bases
ATGTCCGTCGCGCAACGCGCCATTCTGGAAAGTCACGACGCGCGATCCGGCGCCGAGCGGCTGATCGACGAGATCGCCGA
CCGCATCGGCGGGCTCGGCGTCGAGCTCGCCGACGTCGCCGGCAACGTCCAGGAAGTGGCCAACCGGGTAAGCTACCAGT
CGCAGCGCTTCGGCCATCTGCAGGCCACCGCCAAGACCATGGTCGCGGCCAATCACGACATCGCCACCGCCTCGCAGGCG
GTGCAATCGGCGACCACAGCTGCGGTCGGCGACATCGCGCAGTCGCGCAACGTGGTTGAGACAGCGGTGCGGCACATCTC
CGAGCTGGTCGATTCGGTGGAGCGCATCGAGCAGCGGCTCGGTTCGGTCGGCGATGCCCTGTCGCAGGTCGCCAAGGTCT
CGGTCGCGATCGAGGCGATCGCCAAGCAGACCAATCTGCTGGCGCTCAACGCCACGATCGAGGCCGCCCGCGCCGGCTCT
GCCGGTCGCGGCTTCGCGGTCGTCGCCAGCGAGGTGAAGTCGCTCGCCGAGGCGACGCGGCAGGCGACGCAGCAGATCGG
CGACACCCTGCGCGGGCTGGACTCGCAGGTGAAGAGCCTGCTCGGCGAGAGCGGCCAGGCCTCCTCGCGCGCCAAGACCG
CGGGCGAAGGCGCCCAGCAGATCGGCGGCATCATCGTCCGCGTCCAGGACGGCTTCACCAGTGTCGGCCAGGAGATCGAT
GGTGTGGCCAAGGCCGCGACCTCCAACCTCGCGCATTGCGACACGGTCATCACCGAGCTGGCCGAGCTCGCCAAGGGCGT
CGACCAGTCCTCGCTCGAGCTGAAACAGGCCGACAGCCGCATCGCCAAGCTGCTCGATCATTCCGAGGCGCTGATCGGGC
TGATCGCCGAAAGCGGCGTGGAGACCGCTGATGCGCCCTTGATCCGGACCGTGGTCGCGACCGCACGGCAGATCTCTTCT
GTGTTCGAGGCGGCGATCGATCGCGGCGAGATCGCGCTCGCCGATTTGCTGGACGAGAGCTATCGCGAAATTCCCGGCAC
CAACCCGAAGCAATATCTCACCCGCTATGTCGAGTTCACCGACCGCGTGCTGCCCGCCATCCAGGACCCGATCCAGGGCA
GCGACCCGCGCATCGTGTTCTGCGTCGCCTGGGCGCGCGGCGGCTATCTGCCGACGCACAATCCGAACTACCGCAAGCCG
CAGGGTCCCGACCCCGTCTGGAACAACGCCAATTGCCGCAACCGCCGGCTGTTCGAGGACCGCGCGGTGAAGAAGGTCGC
CGCCGCCAGCAGCAAGCCGTTCCTGCTGCAGACCTACCGCCGCGACATGGGCGGCGGGCAGTTCGTGCTGATGAAGGACC
TCTCGGCGCCGATCTTCATCAAGGGGCGCCATTGGGGCGCCTTCCGGATGGGCTTCCGGCCGAGCGCGTAG

Upstream 100 bases:

>100_bases
GATCCGCGTCCGCGGCCGGCACTGGGGCGGCTTCCGCACCGCCTACAAATTGTGAGCCGAGCGGTGACCTGCTGAATCCG
TCAAGCCCGGGAGCCTGGAC

Downstream 100 bases:

>100_bases
CGCAACTGTCGTCGCGGAGTCATTGACGCTTCCTATAACTCCGCCGCGATCAGTGGCGGGAGTTGGGACATGAGCGACCA
TCCGGAGCTTGATGCACTGC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MSVAQRAILESHDARSGAERLIDEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHLQATAKTMVAANHDIATASQA
VQSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRLGSVGDALSQVAKVSVAIEAIAKQTNLLALNATIEAARAGS
AGRGFAVVASEVKSLAEATRQATQQIGDTLRGLDSQVKSLLGESGQASSRAKTAGEGAQQIGGIIVRVQDGFTSVGQEID
GVAKAATSNLAHCDTVITELAELAKGVDQSSLELKQADSRIAKLLDHSEALIGLIAESGVETADAPLIRTVVATARQISS
VFEAAIDRGEIALADLLDESYREIPGTNPKQYLTRYVEFTDRVLPAIQDPIQGSDPRIVFCVAWARGGYLPTHNPNYRKP
QGPDPVWNNANCRNRRLFEDRAVKKVAAASSKPFLLQTYRRDMGGGQFVLMKDLSAPIFIKGRHWGAFRMGFRPSA

Sequences:

>Translated_476_residues
MSVAQRAILESHDARSGAERLIDEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHLQATAKTMVAANHDIATASQA
VQSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRLGSVGDALSQVAKVSVAIEAIAKQTNLLALNATIEAARAGS
AGRGFAVVASEVKSLAEATRQATQQIGDTLRGLDSQVKSLLGESGQASSRAKTAGEGAQQIGGIIVRVQDGFTSVGQEID
GVAKAATSNLAHCDTVITELAELAKGVDQSSLELKQADSRIAKLLDHSEALIGLIAESGVETADAPLIRTVVATARQISS
VFEAAIDRGEIALADLLDESYREIPGTNPKQYLTRYVEFTDRVLPAIQDPIQGSDPRIVFCVAWARGGYLPTHNPNYRKP
QGPDPVWNNANCRNRRLFEDRAVKKVAAASSKPFLLQTYRRDMGGGQFVLMKDLSAPIFIKGRHWGAFRMGFRPSA
>Mature_475_residues
SVAQRAILESHDARSGAERLIDEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHLQATAKTMVAANHDIATASQAV
QSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRLGSVGDALSQVAKVSVAIEAIAKQTNLLALNATIEAARAGSA
GRGFAVVASEVKSLAEATRQATQQIGDTLRGLDSQVKSLLGESGQASSRAKTAGEGAQQIGGIIVRVQDGFTSVGQEIDG
VAKAATSNLAHCDTVITELAELAKGVDQSSLELKQADSRIAKLLDHSEALIGLIAESGVETADAPLIRTVVATARQISSV
FEAAIDRGEIALADLLDESYREIPGTNPKQYLTRYVEFTDRVLPAIQDPIQGSDPRIVFCVAWARGGYLPTHNPNYRKPQ
GPDPVWNNANCRNRRLFEDRAVKKVAAASSKPFLLQTYRRDMGGGQFVLMKDLSAPIFIKGRHWGAFRMGFRPSA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=243, Percent_Identity=31.2757201646091, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788195, Length=231, Percent_Identity=31.6017316017316, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787690, Length=182, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789453, Length=246, Percent_Identity=27.2357723577236, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788194, Length=176, Percent_Identity=35.7954545454545, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50770; Mature: 50639

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAQRAILESHDARSGAERLIDEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
QATAKTMVAANHDIATASQAVQSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
GSVGDALSQVAKVSVAIEAIAKQTNLLALNATIEAARAGSAGRGFAVVASEVKSLAEATR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
QATQQIGDTLRGLDSQVKSLLGESGQASSRAKTAGEGAQQIGGIIVRVQDGFTSVGQEID
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCEEEEEECCHHHHHHHHH
GVAKAATSNLAHCDTVITELAELAKGVDQSSLELKQADSRIAKLLDHSEALIGLIAESGV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETADAPLIRTVVATARQISSVFEAAIDRGEIALADLLDESYREIPGTNPKQYLTRYVEFT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
DRVLPAIQDPIQGSDPRIVFCVAWARGGYLPTHNPNYRKPQGPDPVWNNANCRNRRLFED
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RAVKKVAAASSKPFLLQTYRRDMGGGQFVLMKDLSAPIFIKGRHWGAFRMGFRPSA
HHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEECCCCCCC
>Mature Secondary Structure 
SVAQRAILESHDARSGAERLIDEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
QATAKTMVAANHDIATASQAVQSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
GSVGDALSQVAKVSVAIEAIAKQTNLLALNATIEAARAGSAGRGFAVVASEVKSLAEATR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
QATQQIGDTLRGLDSQVKSLLGESGQASSRAKTAGEGAQQIGGIIVRVQDGFTSVGQEID
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCEEEEEECCHHHHHHHHH
GVAKAATSNLAHCDTVITELAELAKGVDQSSLELKQADSRIAKLLDHSEALIGLIAESGV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETADAPLIRTVVATARQISSVFEAAIDRGEIALADLLDESYREIPGTNPKQYLTRYVEFT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
DRVLPAIQDPIQGSDPRIVFCVAWARGGYLPTHNPNYRKPQGPDPVWNNANCRNRRLFED
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RAVKKVAAASSKPFLLQTYRRDMGGGQFVLMKDLSAPIFIKGRHWGAFRMGFRPSA
HHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]