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The map label for this gene is ureD1

Identifier: 146338139

GI number: 146338139

Start: 1105454

End: 1106290

Strand: Direct

Name: ureD1

Synonym: BRADO1036

Alternate gene names: 146338139

Gene position: 1105454-1106290 (Clockwise)

Preceding gene: 146338138

Following gene: 146338140

Centisome position: 14.83

GC content: 69.77

Gene sequence:

>837_bases
ATGCGGGCCGATCCCGCCAGCGCCGCCGCCGATATTTTCGAGGCCAATCGCGCCCGCGGCGCGGTGCGCTTCGACCTGCG
GCTGCAGGACGGCGTGACTCGGCGCCATCATCTGCACGAGTCGGGCTCGCTGCGCGTGCGCTTTCCCTCGCCGGAGGATG
ACGGTCTCTCGGCGATGTTCGTCAACACGGCCGGCGGCATTGCGGGCGGTGACCGTTTCGCCATTGAGGTTGCAGCCGGC
GAAGGCAGCCGCGTGACGTTATCCAGCGCTGCCGCCGAGAAGGTCTACCGCGCGCCGGGCACGCCGGCCGAGCTGGCCAT
TGCGCTGAGGGCCGCCGACAGCGCGCACATCTCCTGGCTGCCCCAGGAGACCATTCTGTTCGATCGCGCCCGCATTCACC
GCCGCATGGACATCGATCTTGCTGAAACTGCCTCGCTGCTGCTGTGCGAGATCGTCGTGTTCGGCCGCACCGCGATGGGC
GAGCGCATGCGTGAGGGCGAGTTCGTCGACCGCTGGCGGCTGCGGCGTGGCGGCAAGCTCGTATTCGCCGAGACCGTGCG
GCTCGACGGCGACATCGGTGACAAGCTGGCACAGCCGGCGATCGCCAATGGCGCGACCGCGATCGGCACCGCGCTGATCG
TGCCCGGCGACGGCGCGCTGGTCGAGCGCATCCGAGAGAGCCTGCCGGCCTCCCGTGGGGAGGCCGGGCTGTCCGCCTGG
AATGGATTTGCAATGGCGCGTTTCTGTGCCCAAGATGCCGCGAGCCTGCGCGCCGACATGATGGCCGTGCTCGGCTGCGC
CTCCGCCGTGCCGCTGCCGCGGCTGTGGCTCAATTAG

Upstream 100 bases:

>100_bases
AATCTCGACCAGGCCGAGATCAGCCGCCAGATGGCGCTGTGATCGTCATTGAGTTCTAAGGGCGCGGTCTCGCCGCGTCC
GGTCCCAGGGGAGGGGATCG

Downstream 100 bases:

>100_bases
ACGTTTACCAACTGACGATTATCCAGAAGCGATCACCAGAGAAGCCGCATGAACCTGTCTCCCCGCGAAAAGGACAAGCT
CCTGATCTCGATGGCCGCCA

Product: putative urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRADPASAAADIFEANRARGAVRFDLRLQDGVTRRHHLHESGSLRVRFPSPEDDGLSAMFVNTAGGIAGGDRFAIEVAAG
EGSRVTLSSAAAEKVYRAPGTPAELAIALRAADSAHISWLPQETILFDRARIHRRMDIDLAETASLLLCEIVVFGRTAMG
ERMREGEFVDRWRLRRGGKLVFAETVRLDGDIGDKLAQPAIANGATAIGTALIVPGDGALVERIRESLPASRGEAGLSAW
NGFAMARFCAQDAASLRADMMAVLGCASAVPLPRLWLN

Sequences:

>Translated_278_residues
MRADPASAAADIFEANRARGAVRFDLRLQDGVTRRHHLHESGSLRVRFPSPEDDGLSAMFVNTAGGIAGGDRFAIEVAAG
EGSRVTLSSAAAEKVYRAPGTPAELAIALRAADSAHISWLPQETILFDRARIHRRMDIDLAETASLLLCEIVVFGRTAMG
ERMREGEFVDRWRLRRGGKLVFAETVRLDGDIGDKLAQPAIANGATAIGTALIVPGDGALVERIRESLPASRGEAGLSAW
NGFAMARFCAQDAASLRADMMAVLGCASAVPLPRLWLN
>Mature_278_residues
MRADPASAAADIFEANRARGAVRFDLRLQDGVTRRHHLHESGSLRVRFPSPEDDGLSAMFVNTAGGIAGGDRFAIEVAAG
EGSRVTLSSAAAEKVYRAPGTPAELAIALRAADSAHISWLPQETILFDRARIHRRMDIDLAETASLLLCEIVVFGRTAMG
ERMREGEFVDRWRLRRGGKLVFAETVRLDGDIGDKLAQPAIANGATAIGTALIVPGDGALVERIRESLPASRGEAGLSAW
NGFAMARFCAQDAASLRADMMAVLGCASAVPLPRLWLN

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED1_BRASO (A4YM24)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001203187.1
- STRING:   A4YM24
- GeneID:   5114883
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO1036
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   QETILFD
- ProtClustDB:   CLSK818584
- BioCyc:   BSP376:BRADO1036-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 29759; Mature: 29759

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADPASAAADIFEANRARGAVRFDLRLQDGVTRRHHLHESGSLRVRFPSPEDDGLSAMF
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCCCEEEECCCCCCCCCEEEE
VNTAGGIAGGDRFAIEVAAGEGSRVTLSSAAAEKVYRAPGTPAELAIALRAADSAHISWL
EECCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCHHEEEEEEECCCCCEEEC
PQETILFDRARIHRRMDIDLAETASLLLCEIVVFGRTAMGERMREGEFVDRWRLRRGGKL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEE
VFAETVRLDGDIGDKLAQPAIANGATAIGTALIVPGDGALVERIRESLPASRGEAGLSAW
EEEEEEEECCCCCHHHCCCCCCCCCHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH
NGFAMARFCAQDAASLRADMMAVLGCASAVPLPRLWLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MRADPASAAADIFEANRARGAVRFDLRLQDGVTRRHHLHESGSLRVRFPSPEDDGLSAMF
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCCCEEEECCCCCCCCCEEEE
VNTAGGIAGGDRFAIEVAAGEGSRVTLSSAAAEKVYRAPGTPAELAIALRAADSAHISWL
EECCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCHHEEEEEEECCCCCEEEC
PQETILFDRARIHRRMDIDLAETASLLLCEIVVFGRTAMGERMREGEFVDRWRLRRGGKL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEE
VFAETVRLDGDIGDKLAQPAIANGATAIGTALIVPGDGALVERIRESLPASRGEAGLSAW
EEEEEEEECCCCCHHHCCCCCCCCCHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH
NGFAMARFCAQDAASLRADMMAVLGCASAVPLPRLWLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA