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The map label for this gene is 146338127

Identifier: 146338127

GI number: 146338127

Start: 1093912

End: 1094739

Strand: Direct

Name: 146338127

Synonym: BRADO1024

Alternate gene names: NA

Gene position: 1093912-1094739 (Clockwise)

Preceding gene: 146338116

Following gene: 146338128

Centisome position: 14.67

GC content: 62.32

Gene sequence:

>828_bases
ATGTCCGGTCTGCCATGGGAAGTCGCGCTGATGCTCGGCCAGACCATCGAGAAGATTCTGCCGATCACCCTGGTTCTCGC
GGTCGTCTTCTCGGTGCTCAGCCATTTCTGGGCCTGCAATCCCGGCAAGCCGTGGTGGCAGAAGCGCGAGCTCGTCACCG
ATATGGTGTATTGGTTTTTCGTGCCGGTGTTCGCCCGCGTGCTGCGCATCGGGCTGCTGGTGCTCGGGGCCAGCGTCATC
TTCAAGATCCACGAGGCCGATGACCTGATCGCTTTCTACGAGAACGGTCATGGGCCGCTGGCGCAGCTGCCGGAGTGGGT
GCAGGGGCTGCTGTTCATCGTGCTGGCTGATTTCATGCTGTACTGGACCCACCGGTTGTTCCACGGCGGCGACTTCTGGA
AATACCACGCCGTTCACCACTCCTCGGAGGAGCTCGACTGGATCTCGGCGGCGCGCTTTCACCCGATCAACCTGATCCTC
GGAACGATCGCCGTCGACGTGATCCTGCTGATGGCCGGCATCTCGCCGAACGTCATGATCTGGGTCGGACCGTTCACGAC
GTTCCATTCCGCCTTCGTGCACGCCAATCTCAACTGGACGCTTGGACCGTTCAAATACGTTCTGGCCACGCCGGTATTCC
ACCGCTGGCACCACACCGCGATGGAAGAGGGCGGCAACACCAATTTCGCCGGCACCTTCCCGCTCTGGGACATCCTGTTC
GGCACGTTCCGCATGCCGGCAGGGCAGCTCCCGACGAGCTACGGCAAGGATGAGGCGACGATGCCGGGCGAGTTCGCAGG
GCAGCTGGTCTTTCCGTTCCGCCGCTGA

Upstream 100 bases:

>100_bases
ATATGGGAAAGACGCGCGCTTGCCGGCCCGGCGCCGGGGTTCACGGCTCCTTAAGCACCAGGGAGTACCCCTCGTTGAGG
TTCAAGAAGCGAGGCATGTT

Downstream 100 bases:

>100_bases
GTGCGCCGTCGGTTTCGAGGAATCGGCGCGCACGTTGGGAGATCGTTCACCAATTGAGCGCAGATTGGCCGGGTCGGGCG
CCGTCACCGCTGCGTATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; Sterol Desaturase-Related Protein; C-5 Sterol Desaturase; TRAP Dicarboxylate Transporter; Sterol Desaturase-Like; Sterol Desaturase Protein; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; YhhN Family Protein; YhhN-Like Protein; Transmembrane Fatty Acid Synthesis Protein; TRAP Dicarboxylate Transporter DctM Subunit; Yhhn Family Protein; TRAP Dicarboxylate Transporter Subunit DctM; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSGLPWEVALMLGQTIEKILPITLVLAVVFSVLSHFWACNPGKPWWQKRELVTDMVYWFFVPVFARVLRIGLLVLGASVI
FKIHEADDLIAFYENGHGPLAQLPEWVQGLLFIVLADFMLYWTHRLFHGGDFWKYHAVHHSSEELDWISAARFHPINLIL
GTIAVDVILLMAGISPNVMIWVGPFTTFHSAFVHANLNWTLGPFKYVLATPVFHRWHHTAMEEGGNTNFAGTFPLWDILF
GTFRMPAGQLPTSYGKDEATMPGEFAGQLVFPFRR

Sequences:

>Translated_275_residues
MSGLPWEVALMLGQTIEKILPITLVLAVVFSVLSHFWACNPGKPWWQKRELVTDMVYWFFVPVFARVLRIGLLVLGASVI
FKIHEADDLIAFYENGHGPLAQLPEWVQGLLFIVLADFMLYWTHRLFHGGDFWKYHAVHHSSEELDWISAARFHPINLIL
GTIAVDVILLMAGISPNVMIWVGPFTTFHSAFVHANLNWTLGPFKYVLATPVFHRWHHTAMEEGGNTNFAGTFPLWDILF
GTFRMPAGQLPTSYGKDEATMPGEFAGQLVFPFRR
>Mature_274_residues
SGLPWEVALMLGQTIEKILPITLVLAVVFSVLSHFWACNPGKPWWQKRELVTDMVYWFFVPVFARVLRIGLLVLGASVIF
KIHEADDLIAFYENGHGPLAQLPEWVQGLLFIVLADFMLYWTHRLFHGGDFWKYHAVHHSSEELDWISAARFHPINLILG
TIAVDVILLMAGISPNVMIWVGPFTTFHSAFVHANLNWTLGPFKYVLATPVFHRWHHTAMEEGGNTNFAGTFPLWDILFG
TFRMPAGQLPTSYGKDEATMPGEFAGQLVFPFRR

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=180, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25144659, Length=151, Percent_Identity=32.4503311258278, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31293; Mature: 31162

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPWEVALMLGQTIEKILPITLVLAVVFSVLSHFWACNPGKPWWQKRELVTDMVYWFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VPVFARVLRIGLLVLGASVIFKIHEADDLIAFYENGHGPLAQLPEWVQGLLFIVLADFML
HHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YWTHRLFHGGDFWKYHAVHHSSEELDWISAARFHPINLILGTIAVDVILLMAGISPNVMI
HHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
WVGPFTTFHSAFVHANLNWTLGPFKYVLATPVFHRWHHTAMEEGGNTNFAGTFPLWDILF
EECCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
GTFRMPAGQLPTSYGKDEATMPGEFAGQLVFPFRR
HHHCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCC
>Mature Secondary Structure 
SGLPWEVALMLGQTIEKILPITLVLAVVFSVLSHFWACNPGKPWWQKRELVTDMVYWFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VPVFARVLRIGLLVLGASVIFKIHEADDLIAFYENGHGPLAQLPEWVQGLLFIVLADFML
HHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YWTHRLFHGGDFWKYHAVHHSSEELDWISAARFHPINLILGTIAVDVILLMAGISPNVMI
HHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
WVGPFTTFHSAFVHANLNWTLGPFKYVLATPVFHRWHHTAMEEGGNTNFAGTFPLWDILF
EECCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
GTFRMPAGQLPTSYGKDEATMPGEFAGQLVFPFRR
HHHCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA