| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gspE [C]
Identifier: 146338120
GI number: 146338120
Start: 1086511
End: 1087812
Strand: Reverse
Name: gspE [C]
Synonym: BRADO1016
Alternate gene names: 146338120
Gene position: 1087812-1086511 (Counterclockwise)
Preceding gene: 146338121
Following gene: 146338119
Centisome position: 14.59
GC content: 64.75
Gene sequence:
>1302_bases GTGGAAGCCCGGCGCTCGGATAATTACTACCAGGTCAAGGCGACGATCTTCGGCGCGCTGATCGAGGCGATCGACCTCGC GCAGCTCGCCAAGCTCGATGGCGAGTCGGCGCGCGAGGAAATCCGCGACATCGTCAACGAGATCATCGCGATCAAGAACA TCGTGATGTCGATCGCCGAGCAGGAGGAGCTGCTCGACGACATCTGCAACGACGTCCTCGGCTACGGCCCGCTCGAACCG CTGCTGTCGCGCGACGACATCGCCGACATCATGGTCAACGGCGCCGGCACGGTCTTCATCGAAGTCAACGGCAAGATCCA GCGCACCGGCATCCGCTTCCGCGACAATCAGCAGCTCCTGAACATCTGCCAGCGCATCGTCAGCCAGGTCGGCCGCCGCG TCGACGAATCCTCGCCGATCTGCGACGCCCGTCTCGCCGACGGCTCCCGCGTCAACGCCATCGTTCCGCCGCTGGCGATC GATGGCCCGGCGCTCACCATTCGTAAGTTCAAGAAGGACAAGCTGACGCTCGATCAGCTGGTCAAATTCGGCGCGATCTC GCCGGAAGGCGCCGAGATCCTGCAGATCATCGGCCGAGTCCGCTGCAACGTGCTGATATCCGGCGGTACCGGCTCCGGCA AGACCACGCTGCTGAACTGCCTGACCAATTACATCGATCATGACGAGCGCGTCATCACCTGCGAGGACGCCGCCGAGCTC CAGCTGCAGCAGCCGCACGTGGTGCGCCTCGAAACCCGGCCGCCGAACATCGAAGGCGAAGGCCAGGTGACGATGCGCGA GCTGGTGAGAAACTGCCTGCGTATGCGTCCCGAACGCATCATCGTCGGCGAGGTCCGCGGCCCGGAGGCGTTCGATCTCC TCCAGGCCATGAACACCGGCCACGACGGCTCGATGGGCACCTTGCACGCCAACAACCCGCGCGAAGCGCTGTCACGCTGC GAATCCATGATCACGATGGGCGGCTTCTCGCTGCCGTCACGCACCATCCGCGAGATGATCTGCGCCTCGATCGACGTCAT CGTGCAGGCCGCGCGCCTGCGCGACGGCTCCCGCCGCATCACGCACATCACCGAGGTGATGGGCATGGAAGGCGACACCA TCATCACCCAGGACATCTTCCTCTACGACATGATCGGGGAGGATGCGAACGGCAAGATCATCGGCCGCCACCGCTCGACC GGCATCGGCCGCCCGCGGTTCTGGGAGCGCGCCCGCTATTATGGCGAAGAAAAGCGGCTGGCGGCGGCGCTCGATGCGGC CGAAGCCGCGGCCAAGGAATAA
Upstream 100 bases:
>100_bases GCCCGAGCTCGCGCCGGCGGCCCCCCGTGCGGCATCTCCGGCCGTGCCGTCGCCTCCATTAGCTCCGACTCGGCAGGCTC CCCCGCCACCTGCCCCCGTG
Downstream 100 bases:
>100_bases GGGAGAGCGCGATGAAGTTTCAGGCTCTCGCCCTCGCGTTCCTCGCCGCGACCGCCATCGGCGGCATCGCCTGGGTCTTC ATCTATCCGATGCTGTCCGG
Product: putative secretory protein kinase, cpaF-like gene
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MEARRSDNYYQVKATIFGALIEAIDLAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAEQEELLDDICNDVLGYGPLEP LLSRDDIADIMVNGAGTVFIEVNGKIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAI DGPALTIRKFKKDKLTLDQLVKFGAISPEGAEILQIIGRVRCNVLISGGTGSGKTTLLNCLTNYIDHDERVITCEDAAEL QLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRC ESMITMGGFSLPSRTIREMICASIDVIVQAARLRDGSRRITHITEVMGMEGDTIITQDIFLYDMIGEDANGKIIGRHRST GIGRPRFWERARYYGEEKRLAAALDAAEAAAKE
Sequences:
>Translated_433_residues MEARRSDNYYQVKATIFGALIEAIDLAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAEQEELLDDICNDVLGYGPLEP LLSRDDIADIMVNGAGTVFIEVNGKIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAI DGPALTIRKFKKDKLTLDQLVKFGAISPEGAEILQIIGRVRCNVLISGGTGSGKTTLLNCLTNYIDHDERVITCEDAAEL QLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRC ESMITMGGFSLPSRTIREMICASIDVIVQAARLRDGSRRITHITEVMGMEGDTIITQDIFLYDMIGEDANGKIIGRHRST GIGRPRFWERARYYGEEKRLAAALDAAEAAAKE >Mature_433_residues MEARRSDNYYQVKATIFGALIEAIDLAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAEQEELLDDICNDVLGYGPLEP LLSRDDIADIMVNGAGTVFIEVNGKIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAI DGPALTIRKFKKDKLTLDQLVKFGAISPEGAEILQIIGRVRCNVLISGGTGSGKTTLLNCLTNYIDHDERVITCEDAAEL QLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRC ESMITMGGFSLPSRTIREMICASIDVIVQAARLRDGSRRITHITEVMGMEGDTIITQDIFLYDMIGEDANGKIIGRHRST GIGRPRFWERARYYGEEKRLAAALDAAEAAAKE
Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]
COG id: COG4962
COG function: function code U; Flp pilus assembly protein, ATPase CpaF
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022399 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 47920; Mature: 47920
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEARRSDNYYQVKATIFGALIEAIDLAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAE CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QEELLDDICNDVLGYGPLEPLLSRDDIADIMVNGAGTVFIEVNGKIQRTGIRFRDNQQLL HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHEECCCCEEEEEECCEEEECCCCCCCCHHHH NICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHH VKFGAISPEGAEILQIIGRVRCNVLISGGTGSGKTTLLNCLTNYIDHDERVITCEDAAEL HHHCCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHC QLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTG EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC HDGSMGTLHANNPREALSRCESMITMGGFSLPSRTIREMICASIDVIVQAARLRDGSRRI CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH THITEVMGMEGDTIITQDIFLYDMIGEDANGKIIGRHRSTGIGRPRFWERARYYGEEKRL HHHHHHHCCCCCEEEEHHHHEEHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHH AAALDAAEAAAKE HHHHHHHHHHCCC >Mature Secondary Structure MEARRSDNYYQVKATIFGALIEAIDLAQLAKLDGESAREEIRDIVNEIIAIKNIVMSIAE CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QEELLDDICNDVLGYGPLEPLLSRDDIADIMVNGAGTVFIEVNGKIQRTGIRFRDNQQLL HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHEECCCCEEEEEECCEEEECCCCCCCCHHHH NICQRIVSQVGRRVDESSPICDARLADGSRVNAIVPPLAIDGPALTIRKFKKDKLTLDQL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCHHHH VKFGAISPEGAEILQIIGRVRCNVLISGGTGSGKTTLLNCLTNYIDHDERVITCEDAAEL HHHCCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHC QLQQPHVVRLETRPPNIEGEGQVTMRELVRNCLRMRPERIIVGEVRGPEAFDLLQAMNTG EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC HDGSMGTLHANNPREALSRCESMITMGGFSLPSRTIREMICASIDVIVQAARLRDGSRRI CCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH THITEVMGMEGDTIITQDIFLYDMIGEDANGKIIGRHRSTGIGRPRFWERARYYGEEKRL HHHHHHHCCCCCEEEEHHHHEEHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHH AAALDAAEAAAKE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12218036; 9634230 [H]